RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 KRBA2Q6ZNG9 492 aa24.25■■□□□ 1.47
COL18A1-207ENST00000473212 ZNF512BQ96KM6 892 aaPredicted RBP24.25■■□□□ 1.47
COL18A1-207ENST00000473212 CUTAO60888 179 aa24.24■■□□□ 1.47
COL18A1-207ENST00000473212 PRR29P0C7W0 189 aa24.24■■□□□ 1.47
COL18A1-207ENST00000473212 REXO1L1PQ8IX06 675 aa24.24■■□□□ 1.47
COL18A1-207ENST00000473212 TMEM87BQ96K49 555 aa24.24■■□□□ 1.47
COL18A1-207ENST00000473212 TEX13AQ9BXU3 409 aaPredicted RBP24.24■■□□□ 1.47
COL18A1-207ENST00000473212 INTS13Q9NVM9 706 aa24.24■■□□□ 1.47
COL18A1-207ENST00000473212 BTG4Q9NY30 223 aa24.24■■□□□ 1.47
COL18A1-207ENST00000473212 WTIPA6NIX2 430 aaPredicted RBP24.24■■□□□ 1.47
COL18A1-207ENST00000473212 BCAMP50895 628 aa24.24■■□□□ 1.47
COL18A1-207ENST00000473212 BMS1Q14692 1282 aaKnown RBP24.24■■□□□ 1.47
COL18A1-207ENST00000473212 PUM3Q15397 648 aaKnown RBP24.24■■□□□ 1.47
COL18A1-207ENST00000473212 SGMS1Q86VZ5 419 aa24.24■■□□□ 1.47
COL18A1-207ENST00000473212 DZIP3Q86Y13 1208 aaKnown RBP24.24■■□□□ 1.47
COL18A1-207ENST00000473212 PATL2C9JE40 543 aaKnown RBP24.23■■□□□ 1.47
COL18A1-207ENST00000473212 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.23■■□□□ 1.47
COL18A1-207ENST00000473212 ITGB4P16144 1822 aa24.23■■□□□ 1.47
COL18A1-207ENST00000473212 URI1O94763 535 aaPredicted RBP24.23■■□□□ 1.47
COL18A1-207ENST00000473212 USP49Q70CQ1 688 aa24.23■■□□□ 1.47
COL18A1-207ENST00000473212 PDILTQ8N807 584 aa24.23■■□□□ 1.47
COL18A1-207ENST00000473212 OXER1Q8TDS5 423 aa24.23■■□□□ 1.47
COL18A1-207ENST00000473212 LPIN2Q92539 896 aa24.23■■□□□ 1.47
COL18A1-207ENST00000473212 A0A0G2JS52 829 aa24.22■■□□□ 1.47
COL18A1-207ENST00000473212 SSRP1Q08945 709 aaKnown RBP24.22■■□□□ 1.47
COL18A1-207ENST00000473212 DIS3L2Q8IYB7 885 aaKnown RBP24.22■■□□□ 1.47
COL18A1-207ENST00000473212 TRMT44Q8IYL2 757 aaKnown RBP24.22■■□□□ 1.47
COL18A1-207ENST00000473212 FHOD1Q9Y613 1164 aa24.22■■□□□ 1.47
COL18A1-207ENST00000473212 NUP98P52948 1817 aa24.22■■□□□ 1.47
COL18A1-207ENST00000473212 FAM177A1Q8N128 213 aaPredicted RBP24.22■■□□□ 1.47
COL18A1-207ENST00000473212 UBXN4Q92575 508 aa24.22■■□□□ 1.47
COL18A1-207ENST00000473212 NOSTRINQ8IVI9 506 aa24.21■■□□□ 1.47
COL18A1-207ENST00000473212 PCDHB6Q9Y5E3 794 aa24.21■■□□□ 1.47
COL18A1-207ENST00000473212 hCG_1642624A0A1W2PR95 340 aa24.21■■□□□ 1.47
COL18A1-207ENST00000473212 FAM205CA6NFA0 338 aa24.21■■□□□ 1.47
COL18A1-207ENST00000473212 FMR1Q06787 632 aaKnown RBP eCLIP24.21■■□□□ 1.478e-7■□□□□ 10.1
COL18A1-207ENST00000473212 AKNAD1Q5T1N1 836 aa24.21■■□□□ 1.47
COL18A1-207ENST00000473212 SUSD4Q5VX71 490 aa24.21■■□□□ 1.47
COL18A1-207ENST00000473212 TMEM139Q8IV31 216 aa24.21■■□□□ 1.47
COL18A1-207ENST00000473212 MNS1Q8NEH6 495 aa24.21■■□□□ 1.47
COL18A1-207ENST00000473212 KRI1Q8N9T8 703 aaKnown RBP24.2■■□□□ 1.46
COL18A1-207ENST00000473212 NUP133Q8WUM0 1156 aa24.2■■□□□ 1.46
COL18A1-207ENST00000473212 SHISA4Q96DD7 197 aa24.2■■□□□ 1.46
COL18A1-207ENST00000473212 FMNL1O95466 1100 aaPredicted RBP24.2■■□□□ 1.46
COL18A1-207ENST00000473212 UQCRFS1P1P0C7P4 283 aa24.2■■□□□ 1.46
COL18A1-207ENST00000473212 TDO2P48775 406 aa24.2■■□□□ 1.46
COL18A1-207ENST00000473212 ADGRA1Q86SQ6 560 aa24.2■■□□□ 1.46
COL18A1-207ENST00000473212 CARD6Q9BX69 1037 aa24.2■■□□□ 1.46
COL18A1-207ENST00000473212 SLC4A4Q9Y6R1 1079 aa24.2■■□□□ 1.46
COL18A1-207ENST00000473212 ABCA3Q99758 1704 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 VWA3AA6NCI4 1184 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 POLR2DO15514 142 aaKnown RBP24.19■■□□□ 1.46
COL18A1-207ENST00000473212 LIFRP42702 1097 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 MDM2Q00987 491 aaPredicted RBP24.19■■□□□ 1.46
COL18A1-207ENST00000473212 MFSD6Q6ZSS7 791 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 PPP2R2CQ9Y2T4 447 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 PARP3Q9Y6F1 533 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 LRP6O75581 1613 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 CHD4Q14839 1912 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 ZSCAN12O43309 604 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 MMP1P03956 469 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 SDR42E1Q8WUS8 393 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 SERTAD1Q9UHV2 236 aa24.19■■□□□ 1.46
COL18A1-207ENST00000473212 ARHGAP6O43182 974 aa24.18■■□□□ 1.46
COL18A1-207ENST00000473212 MYO1BO43795 1136 aa24.18■■□□□ 1.46
COL18A1-207ENST00000473212 PNMA6AP0CW24 399 aaPredicted RBP24.18■■□□□ 1.46
COL18A1-207ENST00000473212 MAP3K12Q12852 859 aa24.18■■□□□ 1.46
COL18A1-207ENST00000473212 MED15Q96RN5 788 aa24.18■■□□□ 1.46
COL18A1-207ENST00000473212 MAN1B1Q9UKM7 699 aa24.18■■□□□ 1.46
COL18A1-207ENST00000473212 ZNF335Q9H4Z2 1342 aaPredicted RBP24.18■■□□□ 1.46
COL18A1-207ENST00000473212 TADA3O75528 432 aa24.18■■□□□ 1.46
COL18A1-207ENST00000473212 ALX1Q15699 326 aa24.18■■□□□ 1.46
COL18A1-207ENST00000473212 FCHSD1Q86WN1 690 aa24.18■■□□□ 1.46
COL18A1-207ENST00000473212 FBXO2Q9UK22 296 aaPredicted RBP24.18■■□□□ 1.46
COL18A1-207ENST00000473212 IFNAR1P17181 557 aa24.17■■□□□ 1.46
COL18A1-207ENST00000473212 ZNF34Q8IZ26 560 aa24.17■■□□□ 1.46
COL18A1-207ENST00000473212 BCL9O00512 1426 aa24.17■■□□□ 1.46
COL18A1-207ENST00000473212 CASP1P29466 404 aa24.17■■□□□ 1.46
COL18A1-207ENST00000473212 RTN1Q16799 776 aa24.17■■□□□ 1.46
COL18A1-207ENST00000473212 BAG1Q99933 345 aaPredicted RBP24.17■■□□□ 1.46
COL18A1-207ENST00000473212 SRRTQ9BXP5 876 aaKnown RBP24.17■■□□□ 1.46
COL18A1-207ENST00000473212 SLC5A1P13866 664 aa24.16■■□□□ 1.46
COL18A1-207ENST00000473212 TBX2Q13207 712 aaPredicted RBP24.16■■□□□ 1.46
COL18A1-207ENST00000473212 POSTNQ15063 836 aa24.16■■□□□ 1.46
COL18A1-207ENST00000473212 MPHOSPH8Q99549 860 aa24.16■■□□□ 1.46
COL18A1-207ENST00000473212 NFE2L3Q9Y4A8 694 aa24.16■■□□□ 1.46
COL18A1-207ENST00000473212 CDK11BP21127 795 aaKnown RBP24.16■■□□□ 1.46
COL18A1-207ENST00000473212 ADKP55263 362 aaKnown RBP24.16■■□□□ 1.46
COL18A1-207ENST00000473212 WTAPQ15007 396 aa24.16■■□□□ 1.46
COL18A1-207ENST00000473212 EARS2Q5JPH6 523 aaKnown RBP24.16■■□□□ 1.46
COL18A1-207ENST00000473212 TMCO3Q6UWJ1 677 aa24.16■■□□□ 1.46
COL18A1-207ENST00000473212 ARGLU1Q9NWB6 273 aaPredicted RBP24.16■■□□□ 1.46
COL18A1-207ENST00000473212 ANKRD36CQ5JPF3 1778 aa24.16■■□□□ 1.46
COL18A1-207ENST00000473212 MROH5Q6ZUA9 1318 aa24.15■■□□□ 1.46
COL18A1-207ENST00000473212 COL4A1P02462 1669 aa24.15■■□□□ 1.46
COL18A1-207ENST00000473212 PLA2G4AP47712 749 aa24.15■■□□□ 1.46
COL18A1-207ENST00000473212 STK36Q9NRP7 1315 aa24.15■■□□□ 1.46
COL18A1-207ENST00000473212 CYP2D7A0A087X1C5 515 aa24.15■■□□□ 1.46
COL18A1-207ENST00000473212 MINDY4BA8MYZ0 360 aa24.15■■□□□ 1.46
COL18A1-207ENST00000473212 WNT7AO00755 349 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms