RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 CCDC84Q86UT8 332 aaPredicted RBP24.22■■□□□ 1.47
COL9A3-210ENST00000472880 SH3RF3Q8TEJ3 882 aaPredicted RBP24.22■■□□□ 1.47
COL9A3-210ENST00000472880 SMCR8Q8TEV9 937 aaPredicted RBP24.22■■□□□ 1.47
COL9A3-210ENST00000472880 ZBTB7BO15156 539 aaPredicted RBP24.21■■□□□ 1.47
COL9A3-210ENST00000472880 AATFQ9NY61 560 aaKnown RBP eCLIP24.21■■□□□ 1.47
COL9A3-210ENST00000472880 NOP58Q9Y2X3 529 aaKnown RBP24.21■■□□□ 1.47
COL9A3-210ENST00000472880 MGAMO43451 1857 aa24.2■■□□□ 1.46
COL9A3-210ENST00000472880 ZBED9Q6R2W3 1325 aa24.2■■□□□ 1.46
COL9A3-210ENST00000472880 ZNF512BQ96KM6 892 aaPredicted RBP24.2■■□□□ 1.46
COL9A3-210ENST00000472880 HERC5Q9UII4 1024 aaKnown RBP24.2■■□□□ 1.46
COL9A3-210ENST00000472880 AGTPBP1Q9UPW5 1226 aa24.2■■□□□ 1.46
COL9A3-210ENST00000472880 CYP2E1P05181 493 aaPredicted RBP24.19■■□□□ 1.46
COL9A3-210ENST00000472880 GRK4P32298 578 aa24.19■■□□□ 1.46
COL9A3-210ENST00000472880 GCC1Q96CN9 775 aa24.19■■□□□ 1.46
COL9A3-210ENST00000472880 TBC1D2Q9BYX2 928 aa24.19■■□□□ 1.46
COL9A3-210ENST00000472880 DHX36Q9H2U1 1008 aaKnown RBP24.19■■□□□ 1.46
COL9A3-210ENST00000472880 DBNLQ9UJU6 430 aaKnown RBP24.19■■□□□ 1.46
COL9A3-210ENST00000472880 BRCA2P51587 3418 aa24.19■■□□□ 1.46
COL9A3-210ENST00000472880 ZAP70P43403 619 aa24.18■■□□□ 1.46
COL9A3-210ENST00000472880 PRKCZQ05513 592 aa24.18■■□□□ 1.46
COL9A3-210ENST00000472880 PROCA1Q8NCQ7 364 aaPredicted RBP24.18■■□□□ 1.46
COL9A3-210ENST00000472880 PNMA3Q9UL41 463 aa24.18■■□□□ 1.46
COL9A3-210ENST00000472880 LOC285556D6RIA3 1793 aa24.18■■□□□ 1.46
COL9A3-210ENST00000472880 FOCADQ5VW36 1801 aa24.17■■□□□ 1.46
COL9A3-210ENST00000472880 IGSF3O75054 1194 aa24.17■■□□□ 1.46
COL9A3-210ENST00000472880 CAP2P40123 477 aa24.17■■□□□ 1.46
COL9A3-210ENST00000472880 ZNF280CQ8ND82 737 aa24.17■■□□□ 1.46
COL9A3-210ENST00000472880 TLR7Q9NYK1 1049 aaKnown RBP24.17■■□□□ 1.46
COL9A3-210ENST00000472880 PI4KBQ9UBF8 816 aa24.17■■□□□ 1.46
COL9A3-210ENST00000472880 BIN2Q9UBW5 565 aaPredicted RBP24.17■■□□□ 1.46
COL9A3-210ENST00000472880 MKI67P46013 3256 aaKnown RBP24.17■■□□□ 1.46
COL9A3-210ENST00000472880 SIPA1L1O43166 1804 aa24.17■■□□□ 1.46
COL9A3-210ENST00000472880 FLT1P17948 1338 aa24.16■■□□□ 1.46
COL9A3-210ENST00000472880 CDK5RAP2Q96SN8 1893 aa24.16■■□□□ 1.46
COL9A3-210ENST00000472880 PPP4CP60510 307 aa24.16■■□□□ 1.46
COL9A3-210ENST00000472880 SPP2Q13103 211 aa24.16■■□□□ 1.46
COL9A3-210ENST00000472880 MTFR1Q15390 333 aa24.16■■□□□ 1.46
COL9A3-210ENST00000472880 CEP85Q6P2H3 762 aa24.16■■□□□ 1.46
COL9A3-210ENST00000472880 ADGRA1Q86SQ6 560 aa24.16■■□□□ 1.46
COL9A3-210ENST00000472880 MAPKAPK5Q8IW41 473 aa24.16■■□□□ 1.46
COL9A3-210ENST00000472880 TGFBRAP1Q8WUH2 860 aa24.16■■□□□ 1.46
COL9A3-210ENST00000472880 CCDC8Q9H0W5 538 aaPredicted RBP24.16■■□□□ 1.46
COL9A3-210ENST00000472880 PIH1D3Q9NQM4 214 aaKnown RBP24.16■■□□□ 1.46
COL9A3-210ENST00000472880 MYO5AQ9Y4I1 1855 aaKnown RBP24.15■■□□□ 1.46
COL9A3-210ENST00000472880 USP17L5A8MUK1 530 aa24.15■■□□□ 1.46
COL9A3-210ENST00000472880 TREML2Q5T2D2 321 aa24.15■■□□□ 1.46
COL9A3-210ENST00000472880 SLAIN1Q8ND83 568 aa24.15■■□□□ 1.46
COL9A3-210ENST00000472880 EAF2Q96CJ1 260 aaPredicted RBP24.15■■□□□ 1.46
COL9A3-210ENST00000472880 TRIM34Q9BYJ4 488 aa24.15■■□□□ 1.46
COL9A3-210ENST00000472880 AS3MTQ9HBK9 375 aa24.15■■□□□ 1.46
COL9A3-210ENST00000472880 TNPO2O14787 897 aaKnown RBP24.14■■□□□ 1.45
COL9A3-210ENST00000472880 HMGCS2P54868 508 aa24.14■■□□□ 1.45
COL9A3-210ENST00000472880 UBXN2AP68543 259 aa24.14■■□□□ 1.45
COL9A3-210ENST00000472880 PABPC4Q13310 644 aaKnown RBP eCLIP24.14■■□□□ 1.45
COL9A3-210ENST00000472880 ERC1Q8IUD2 1116 aa24.14■■□□□ 1.45
COL9A3-210ENST00000472880 CRACR2BQ8N4Y2 399 aaPredicted RBP24.14■■□□□ 1.45
COL9A3-210ENST00000472880 GABRQQ9UN88 632 aa24.14■■□□□ 1.45
COL9A3-210ENST00000472880 IDH1O75874 414 aaKnown RBP24.13■■□□□ 1.45
COL9A3-210ENST00000472880 RRP1BQ14684 758 aaKnown RBP24.13■■□□□ 1.45
COL9A3-210ENST00000472880 ANKRD13CQ8N6S4 541 aa24.13■■□□□ 1.45
COL9A3-210ENST00000472880 NKX2-3Q8TAU0 364 aa24.13■■□□□ 1.45
COL9A3-210ENST00000472880 PANK1Q8TE04 598 aa24.13■■□□□ 1.45
COL9A3-210ENST00000472880 CCL5P13501 91 aa24.12■■□□□ 1.45
COL9A3-210ENST00000472880 CYP7A1P22680 504 aa24.12■■□□□ 1.45
COL9A3-210ENST00000472880 EXOC6BQ9Y2D4 811 aa24.12■■□□□ 1.45
COL9A3-210ENST00000472880 HLA-DOAP06340 250 aa24.11■■□□□ 1.45
COL9A3-210ENST00000472880 ASNSP08243 561 aa24.11■■□□□ 1.45
COL9A3-210ENST00000472880 FLT3LGP49771 235 aa24.11■■□□□ 1.45
COL9A3-210ENST00000472880 FAM110CQ1W6H9 321 aa24.11■■□□□ 1.45
COL9A3-210ENST00000472880 AACSQ86V21 672 aa24.11■■□□□ 1.45
COL9A3-210ENST00000472880 SHISA4Q96DD7 197 aa24.11■■□□□ 1.45
COL9A3-210ENST00000472880 RNF208Q9H0X6 261 aa24.11■■□□□ 1.45
COL9A3-210ENST00000472880 PALD1Q9ULE6 856 aa24.11■■□□□ 1.45
COL9A3-210ENST00000472880 ADCY3O60266 1144 aa24.1■■□□□ 1.45
COL9A3-210ENST00000472880 MS4A1P11836 297 aa24.1■■□□□ 1.45
COL9A3-210ENST00000472880 GCLCP48506 637 aaPredicted RBP24.1■■□□□ 1.45
COL9A3-210ENST00000472880 DYNLL1P63167 89 aaKnown RBP24.1■■□□□ 1.45
COL9A3-210ENST00000472880 HSP90AB4PQ58FF6 505 aa24.1■■□□□ 1.45
COL9A3-210ENST00000472880 SH3D19Q5HYK7 790 aa24.1■■□□□ 1.45
COL9A3-210ENST00000472880 CERS3Q8IU89 383 aa24.1■■□□□ 1.45
COL9A3-210ENST00000472880 FOXP4Q8IVH2 680 aaPredicted RBP24.1■■□□□ 1.45
COL9A3-210ENST00000472880 COA7Q96BR5 231 aa24.1■■□□□ 1.45
COL9A3-210ENST00000472880 DNAJC18Q9H819 358 aa24.1■■□□□ 1.45
COL9A3-210ENST00000472880 SAP30BPQ9UHR5 308 aaKnown RBP24.1■■□□□ 1.45
COL9A3-210ENST00000472880 GJB1P08034 283 aa24.09■■□□□ 1.45
COL9A3-210ENST00000472880 MTMR2Q13614 643 aa24.09■■□□□ 1.45
COL9A3-210ENST00000472880 WDR18Q9BV38 432 aa24.09■■□□□ 1.45
COL9A3-210ENST00000472880 GJA8P48165 433 aa24.08■■□□□ 1.45
COL9A3-210ENST00000472880 MAP3K12Q12852 859 aa24.08■■□□□ 1.45
COL9A3-210ENST00000472880 IRF5Q13568 498 aa24.08■■□□□ 1.45
COL9A3-210ENST00000472880 METTL16Q86W50 562 aaKnown RBP24.08■■□□□ 1.45
COL9A3-210ENST00000472880 MAGEB6Q8N7X4 407 aa24.08■■□□□ 1.45
COL9A3-210ENST00000472880 MIGA1Q8NAN2 632 aa24.08■■□□□ 1.45
COL9A3-210ENST00000472880 ASCC2Q9H1I8 757 aaPredicted RBP24.08■■□□□ 1.45
COL9A3-210ENST00000472880 GINM1Q9NU53 330 aa24.08■■□□□ 1.45
COL9A3-210ENST00000472880 TMOD4Q9NZQ9 345 aa24.08■■□□□ 1.45
COL9A3-210ENST00000472880 TAOK2Q9UL54 1235 aa24.08■■□□□ 1.45
COL9A3-210ENST00000472880 NDUFB9Q9Y6M9 179 aa24.08■■□□□ 1.45
COL9A3-210ENST00000472880 GDF11O95390 407 aa24.07■■□□□ 1.44
COL9A3-210ENST00000472880 ELNP15502 786 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms