RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 PHKA1P46020 1223 aa17.48■□□□□ 0.39
ABCF3-209ENST00000472608 NECAB2Q7Z6G3 386 aa17.48■□□□□ 0.39
ABCF3-209ENST00000472608 WDR66Q8TBY9 1149 aa17.48■□□□□ 0.39
ABCF3-209ENST00000472608 COL25A1Q9BXS0 654 aaPredicted RBP17.48■□□□□ 0.39
ABCF3-209ENST00000472608 DENND2AQ9ULE3 1009 aa17.48■□□□□ 0.39
ABCF3-209ENST00000472608 VCANP13611 3396 aa17.48■□□□□ 0.39
ABCF3-209ENST00000472608 ALPK3Q96L96 1907 aa17.48■□□□□ 0.39
ABCF3-209ENST00000472608 PDS5AQ29RF7 1337 aaKnown RBP17.47■□□□□ 0.39
ABCF3-209ENST00000472608 ELNP15502 786 aa17.47■□□□□ 0.39
ABCF3-209ENST00000472608 Q7L0L9 218 aa17.47■□□□□ 0.39
ABCF3-209ENST00000472608 ANKLE1Q8NAG6 615 aa17.47■□□□□ 0.39
ABCF3-209ENST00000472608 SLC45A1Q9Y2W3 748 aa17.47■□□□□ 0.39
ABCF3-209ENST00000472608 MAST3O60307 1309 aa17.47■□□□□ 0.39
ABCF3-209ENST00000472608 GORABQ5T7V8 394 aa17.46■□□□□ 0.39
ABCF3-209ENST00000472608 CLASRPQ8N2M8 674 aaKnown RBP17.46■□□□□ 0.39
ABCF3-209ENST00000472608 EAF2Q96CJ1 260 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-209ENST00000472608 ZNF512BQ96KM6 892 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-209ENST00000472608 IQSEC3Q9UPP2 1182 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-209ENST00000472608 A0A0G2JLL6 359 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-209ENST00000472608 UQCRFS1P1P0C7P4 283 aa17.45■□□□□ 0.38
ABCF3-209ENST00000472608 ARID4AP29374 1257 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-209ENST00000472608 CHAF1AQ13111 956 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-209ENST00000472608 HDAC1Q13547 482 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-209ENST00000472608 CCDC158Q5M9N0 1113 aa17.45■□□□□ 0.38
ABCF3-209ENST00000472608 FASTKD5Q7L8L6 764 aaKnown RBP17.45■□□□□ 0.38
ABCF3-209ENST00000472608 PRRT2Q7Z6L0 340 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-209ENST00000472608 EXOC6Q8TAG9 804 aa17.45■□□□□ 0.38
ABCF3-209ENST00000472608 DIS3LQ8TF46 1054 aaKnown RBP17.45■□□□□ 0.38
ABCF3-209ENST00000472608 SALL1Q9NSC2 1324 aa17.45■□□□□ 0.38
ABCF3-209ENST00000472608 SPTBN5Q9NRC6 3674 aaKnown RBP17.44■□□□□ 0.38
ABCF3-209ENST00000472608 TDHQ8IZJ6 230 aa17.44■□□□□ 0.38
ABCF3-209ENST00000472608 ZGPATQ8N5A5 531 aaKnown RBP17.44■□□□□ 0.38
ABCF3-209ENST00000472608 DBNDD2Q9BQY9 259 aa17.44■□□□□ 0.38
ABCF3-209ENST00000472608 LRRCC1Q9C099 1032 aa17.44■□□□□ 0.38
ABCF3-209ENST00000472608 TNPO2O14787 897 aaKnown RBP17.43■□□□□ 0.38
ABCF3-209ENST00000472608 RASGRF1Q13972 1273 aa17.43■□□□□ 0.38
ABCF3-209ENST00000472608 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.43■□□□□ 0.389e-6■■■■■ 32.4
ABCF3-209ENST00000472608 DBNLQ9UJU6 430 aaKnown RBP17.43■□□□□ 0.38
ABCF3-209ENST00000472608 ATRNL1Q5VV63 1379 aa17.42■□□□□ 0.38
ABCF3-209ENST00000472608 PHF20L1A8MW92 1017 aa17.42■□□□□ 0.38
ABCF3-209ENST00000472608 IGSF3O75054 1194 aa17.42■□□□□ 0.38
ABCF3-209ENST00000472608 AACSQ86V21 672 aa17.42■□□□□ 0.38
ABCF3-209ENST00000472608 C7orf61Q8IZ16 206 aa17.42■□□□□ 0.38
ABCF3-209ENST00000472608 CCDC8Q9H0W5 538 aaPredicted RBP17.42■□□□□ 0.38
ABCF3-209ENST00000472608 IL1RAPL2Q9NP60 686 aa17.42■□□□□ 0.38
ABCF3-209ENST00000472608 ZMYND8Q9ULU4 1186 aaPredicted RBP17.42■□□□□ 0.38
ABCF3-209ENST00000472608 AFG3L2Q9Y4W6 797 aa17.42■□□□□ 0.38
ABCF3-209ENST00000472608 MAGEA10P43363 369 aaPredicted RBP17.41■□□□□ 0.38
ABCF3-209ENST00000472608 NFIAQ12857 509 aa17.41■□□□□ 0.38
ABCF3-209ENST00000472608 TTC39AQ5SRH9 613 aa17.41■□□□□ 0.38
ABCF3-209ENST00000472608 NBPF3Q9H094 633 aa17.41■□□□□ 0.38
ABCF3-209ENST00000472608 HMG20BQ9P0W2 317 aa17.41■□□□□ 0.38
ABCF3-209ENST00000472608 DOCK3Q8IZD9 2030 aa17.41■□□□□ 0.38
ABCF3-209ENST00000472608 MYH13Q9UKX3 1938 aa17.41■□□□□ 0.38
ABCF3-209ENST00000472608 PTPRAP18433 802 aa17.4■□□□□ 0.38
ABCF3-209ENST00000472608 MAP3K10Q02779 954 aa17.4■□□□□ 0.38
ABCF3-209ENST00000472608 TCP10Q12799 353 aa17.4■□□□□ 0.38
ABCF3-209ENST00000472608 SPTY2D1Q68D10 685 aaPredicted RBP17.4■□□□□ 0.38
ABCF3-209ENST00000472608 CDC42EP5Q6NZY7 148 aa17.4■□□□□ 0.38
ABCF3-209ENST00000472608 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.4■□□□□ 0.38
ABCF3-209ENST00000472608 SCYL3Q8IZE3 742 aa17.4■□□□□ 0.38
ABCF3-209ENST00000472608 SPATA5Q8NB90 893 aa17.4■□□□□ 0.38
ABCF3-209ENST00000472608 COA7Q96BR5 231 aa17.4■□□□□ 0.38
ABCF3-209ENST00000472608 RWDD1Q9H446 243 aaPredicted RBP17.4■□□□□ 0.38
ABCF3-209ENST00000472608 FAM198AQ9UFP1 575 aa17.4■□□□□ 0.38
ABCF3-209ENST00000472608 ZHX2Q9Y6X8 837 aa17.4■□□□□ 0.38
ABCF3-209ENST00000472608 APBB1O00213 710 aa17.39■□□□□ 0.37
ABCF3-209ENST00000472608 IFIT2P09913 472 aaKnown RBP17.39■□□□□ 0.37
ABCF3-209ENST00000472608 MCAMP43121 646 aa17.39■□□□□ 0.37
ABCF3-209ENST00000472608 FAM109BQ6ICB4 259 aaPredicted RBP17.39■□□□□ 0.37
ABCF3-209ENST00000472608 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.39■□□□□ 0.37
ABCF3-209ENST00000472608 TLR7Q9NYK1 1049 aaKnown RBP17.39■□□□□ 0.37
ABCF3-209ENST00000472608 DAGLAQ9Y4D2 1042 aa17.39■□□□□ 0.37
ABCF3-209ENST00000472608 POTEB2H3BUK9 544 aa17.38■□□□□ 0.37
ABCF3-209ENST00000472608 LDHBP07195 334 aaKnown RBP17.38■□□□□ 0.37
ABCF3-209ENST00000472608 FAM110CQ1W6H9 321 aa17.38■□□□□ 0.37
ABCF3-209ENST00000472608 OGDHLQ9ULD0 1010 aa17.38■□□□□ 0.37
ABCF3-209ENST00000472608 RPTORQ8N122 1335 aa17.38■□□□□ 0.37
ABCF3-209ENST00000472608 LAMA2P24043 3122 aaKnown RBP17.38■□□□□ 0.37
ABCF3-209ENST00000472608 HMGCRP04035 888 aa17.37■□□□□ 0.37
ABCF3-209ENST00000472608 SYN1P17600 705 aa17.37■□□□□ 0.37
ABCF3-209ENST00000472608 ZFPM1Q8IX07 1006 aa17.37■□□□□ 0.37
ABCF3-209ENST00000472608 SMCR8Q8TEV9 937 aaPredicted RBP17.37■□□□□ 0.37
ABCF3-209ENST00000472608 C11orf49Q9H6J7 331 aa17.37■□□□□ 0.37
ABCF3-209ENST00000472608 GJD2Q9UKL4 321 aa17.37■□□□□ 0.37
ABCF3-209ENST00000472608 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
ABCF3-209ENST00000472608 PRDX5P30044 214 aa17.36■□□□□ 0.37
ABCF3-209ENST00000472608 GADL1Q6ZQY3 521 aa17.36■□□□□ 0.37
ABCF3-209ENST00000472608 SLF2Q8IX21 1173 aa17.36■□□□□ 0.37
ABCF3-209ENST00000472608 SMC5Q8IY18 1101 aa17.36■□□□□ 0.37
ABCF3-209ENST00000472608 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
ABCF3-209ENST00000472608 UBE2OQ9C0C9 1292 aaKnown RBP17.36■□□□□ 0.37
ABCF3-209ENST00000472608 HMX1Q9NP08 348 aaPredicted RBP17.36■□□□□ 0.37
ABCF3-209ENST00000472608 PICK1Q9NRD5 415 aa17.36■□□□□ 0.37
ABCF3-209ENST00000472608 AGTPBP1Q9UPW5 1226 aa17.36■□□□□ 0.37
ABCF3-209ENST00000472608 PTPRFP10586 1907 aa17.35■□□□□ 0.37
ABCF3-209ENST00000472608 DIXDC1Q155Q3 683 aa17.35■□□□□ 0.37
ABCF3-209ENST00000472608 TMED8Q6PL24 325 aaPredicted RBP17.35■□□□□ 0.37
ABCF3-209ENST00000472608 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
ABCF3-209ENST00000472608 ANKRD13CQ8N6S4 541 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms