RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 FLT3LGP49771 235 aa23.33■■□□□ 1.33
RHBDF1-207ENST00000472390 JAG1P78504 1218 aa23.33■■□□□ 1.33
RHBDF1-207ENST00000472390 G3BP1Q13283 466 aaKnown RBP eCLIP23.33■■□□□ 1.33
RHBDF1-207ENST00000472390 TEX11Q8IYF3 940 aa23.33■■□□□ 1.33
RHBDF1-207ENST00000472390 ANKRD13CQ8N6S4 541 aa23.33■■□□□ 1.33
RHBDF1-207ENST00000472390 TLR7Q9NYK1 1049 aaKnown RBP23.33■■□□□ 1.33
RHBDF1-207ENST00000472390 TAOK2Q9UL54 1235 aa23.33■■□□□ 1.33
RHBDF1-207ENST00000472390 FOCADQ5VW36 1801 aa23.33■■□□□ 1.32
RHBDF1-207ENST00000472390 SPP2Q13103 211 aa23.32■■□□□ 1.32
RHBDF1-207ENST00000472390 SMCR8Q8TEV9 937 aaPredicted RBP23.32■■□□□ 1.32
RHBDF1-207ENST00000472390 AATFQ9NY61 560 aaKnown RBP eCLIP23.32■■□□□ 1.32
RHBDF1-207ENST00000472390 AGTPBP1Q9UPW5 1226 aa23.32■■□□□ 1.32
RHBDF1-207ENST00000472390 ADCY3O60266 1144 aa23.31■■□□□ 1.32
RHBDF1-207ENST00000472390 HMGCS2P54868 508 aa23.31■■□□□ 1.32
RHBDF1-207ENST00000472390 LRP2BPQ9P2M1 347 aa23.31■■□□□ 1.32
RHBDF1-207ENST00000472390 COL2A1P02458 1487 aaPredicted RBP23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 ALPK3Q96L96 1907 aa23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 TNPO2O14787 897 aaKnown RBP23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 INHAP05111 366 aa23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 GJA8P48165 433 aa23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 POLA2Q14181 598 aa23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 TNNI3KQ59H18 835 aa23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 CHRDL2Q6WN34 429 aa23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 UBE2Q1Q7Z7E8 422 aa23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 MAPKAPK5Q8IW41 473 aa23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 DNAJC18Q9H819 358 aa23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 FPGT-TNNI3KV9GXZ4 949 aa23.3■■□□□ 1.32
RHBDF1-207ENST00000472390 PLXNB2O15031 1838 aa23.29■■□□□ 1.32
RHBDF1-207ENST00000472390 IPO8O15397 1037 aaKnown RBP23.29■■□□□ 1.32
RHBDF1-207ENST00000472390 TBC1D12O60347 775 aa23.29■■□□□ 1.32
RHBDF1-207ENST00000472390 GJB1P08034 283 aa23.29■■□□□ 1.32
RHBDF1-207ENST00000472390 RLBP1P12271 317 aa23.29■■□□□ 1.32
RHBDF1-207ENST00000472390 GSTO1P78417 241 aa23.29■■□□□ 1.32
RHBDF1-207ENST00000472390 U2AF1L4Q8WU68 220 aaKnown RBP23.29■■□□□ 1.32
RHBDF1-207ENST00000472390 PIH1D3Q9NQM4 214 aaKnown RBP23.29■■□□□ 1.32
RHBDF1-207ENST00000472390 NDUFB9Q9Y6M9 179 aa23.29■■□□□ 1.32
RHBDF1-207ENST00000472390 RANBP2P49792 3224 aaKnown RBP23.28■■□□□ 1.32
RHBDF1-207ENST00000472390 LDHCP07864 332 aa23.28■■□□□ 1.32
RHBDF1-207ENST00000472390 DYNLL1P63167 89 aaKnown RBP23.28■■□□□ 1.32
RHBDF1-207ENST00000472390 TTC39AQ5SRH9 613 aa23.28■■□□□ 1.32
RHBDF1-207ENST00000472390 SLAIN1Q8ND83 568 aa23.28■■□□□ 1.32
RHBDF1-207ENST00000472390 DPF3Q92784 378 aa23.28■■□□□ 1.32
RHBDF1-207ENST00000472390 SLC45A1Q9Y2W3 748 aa23.28■■□□□ 1.32
RHBDF1-207ENST00000472390 NPM3O75607 178 aaKnown RBP23.27■■□□□ 1.32
RHBDF1-207ENST00000472390 CYP2E1P05181 493 aaPredicted RBP23.27■■□□□ 1.32
RHBDF1-207ENST00000472390 CAP2P40123 477 aa23.27■■□□□ 1.32
RHBDF1-207ENST00000472390 ZAP70P43403 619 aa23.27■■□□□ 1.32
RHBDF1-207ENST00000472390 UBXN2AP68543 259 aa23.27■■□□□ 1.32
RHBDF1-207ENST00000472390 OS9Q13438 667 aaPredicted RBP23.27■■□□□ 1.32
RHBDF1-207ENST00000472390 NAA16Q6N069 864 aaPredicted RBP23.27■■□□□ 1.32
RHBDF1-207ENST00000472390 SAP30BPQ9UHR5 308 aaKnown RBP23.27■■□□□ 1.32
RHBDF1-207ENST00000472390 FARP2O94887 1054 aaPredicted RBP23.26■■□□□ 1.31
RHBDF1-207ENST00000472390 GDF11O95390 407 aa23.26■■□□□ 1.31
RHBDF1-207ENST00000472390 UQCRFS1P1P0C7P4 283 aa23.26■■□□□ 1.31
RHBDF1-207ENST00000472390 ZKSCAN2Q63HK3 967 aa23.26■■□□□ 1.31
RHBDF1-207ENST00000472390 ZNF280CQ8ND82 737 aa23.26■■□□□ 1.31
RHBDF1-207ENST00000472390 TGFBRAP1Q8WUH2 860 aa23.26■■□□□ 1.31
RHBDF1-207ENST00000472390 FLT1P17948 1338 aa23.26■■□□□ 1.31
RHBDF1-207ENST00000472390 TRIM32Q13049 653 aa23.25■■□□□ 1.31
RHBDF1-207ENST00000472390 SSH3Q8TE77 659 aa23.25■■□□□ 1.31
RHBDF1-207ENST00000472390 DEFB118Q96PH6 123 aa23.25■■□□□ 1.31
RHBDF1-207ENST00000472390 CCDC8Q9H0W5 538 aaPredicted RBP23.25■■□□□ 1.31
RHBDF1-207ENST00000472390 ASCC2Q9H1I8 757 aaPredicted RBP23.25■■□□□ 1.31
RHBDF1-207ENST00000472390 DBNLQ9UJU6 430 aaKnown RBP23.25■■□□□ 1.31
RHBDF1-207ENST00000472390 SZT2Q5T011 3432 aa23.24■■□□□ 1.31
RHBDF1-207ENST00000472390 SURF6O75683 361 aaKnown RBP23.24■■□□□ 1.31
RHBDF1-207ENST00000472390 MTMR2Q13614 643 aa23.24■■□□□ 1.31
RHBDF1-207ENST00000472390 PALD1Q9ULE6 856 aa23.24■■□□□ 1.31
RHBDF1-207ENST00000472390 MYH1P12882 1939 aa23.23■■□□□ 1.31
RHBDF1-207ENST00000472390 USP17L5A8MUK1 530 aa23.23■■□□□ 1.31
RHBDF1-207ENST00000472390 ATP8B2P98198 1209 aa23.23■■□□□ 1.31
RHBDF1-207ENST00000472390 FAM110CQ1W6H9 321 aa23.23■■□□□ 1.31
RHBDF1-207ENST00000472390 PROCA1Q8NCQ7 364 aaPredicted RBP23.23■■□□□ 1.31
RHBDF1-207ENST00000472390 DIS3LQ8TF46 1054 aaKnown RBP23.23■■□□□ 1.31
RHBDF1-207ENST00000472390 RBM27Q9P2N5 1060 aaKnown RBP23.23■■□□□ 1.31
RHBDF1-207ENST00000472390 SGPL1O95470 568 aa23.22■■□□□ 1.31
RHBDF1-207ENST00000472390 ITPRIPQ8IWB1 547 aa23.22■■□□□ 1.31
RHBDF1-207ENST00000472390 NKX2-3Q8TAU0 364 aa23.22■■□□□ 1.31
RHBDF1-207ENST00000472390 NOL10Q9BSC4 688 aaKnown RBP23.22■■□□□ 1.31
RHBDF1-207ENST00000472390 HNRNPUQ00839 825 aaKnown RBP eCLIP23.21■■□□□ 1.31
RHBDF1-207ENST00000472390 IRF5Q13568 498 aa23.21■■□□□ 1.31
RHBDF1-207ENST00000472390 MIGA1Q8NAN2 632 aa23.21■■□□□ 1.31
RHBDF1-207ENST00000472390 EAF2Q96CJ1 260 aaPredicted RBP23.21■■□□□ 1.31
RHBDF1-207ENST00000472390 GPR108Q9NPR9 543 aa23.21■■□□□ 1.31
RHBDF1-207ENST00000472390 PNMA3Q9UL41 463 aa23.21■■□□□ 1.31
RHBDF1-207ENST00000472390 CCDC158Q5M9N0 1113 aa23.2■■□□□ 1.3
RHBDF1-207ENST00000472390 COA7Q96BR5 231 aa23.2■■□□□ 1.3
RHBDF1-207ENST00000472390 TXNRD2Q9NNW7 524 aa23.2■■□□□ 1.3
RHBDF1-207ENST00000472390 HERC5Q9UII4 1024 aaKnown RBP23.2■■□□□ 1.3
RHBDF1-207ENST00000472390 MAP4K4O95819 1239 aaPredicted RBP23.19■■□□□ 1.3
RHBDF1-207ENST00000472390 SH3D19Q5HYK7 790 aa23.19■■□□□ 1.3
RHBDF1-207ENST00000472390 PXYLP1Q8TE99 480 aa23.19■■□□□ 1.3
RHBDF1-207ENST00000472390 ANTXR1Q9H6X2 564 aa23.19■■□□□ 1.3
RHBDF1-207ENST00000472390 PAK6Q9NQU5 681 aaPredicted RBP23.19■■□□□ 1.3
RHBDF1-207ENST00000472390 PI4KBQ9UBF8 816 aa23.19■■□□□ 1.3
RHBDF1-207ENST00000472390 DDX60LQ5H9U9 1706 aaKnown RBP23.19■■□□□ 1.3
RHBDF1-207ENST00000472390 TFRCP02786 760 aaKnown RBP23.18■■□□□ 1.3
RHBDF1-207ENST00000472390 CYP7A1P22680 504 aa23.18■■□□□ 1.3
RHBDF1-207ENST00000472390 PPP4CP60510 307 aa23.18■■□□□ 1.3
RHBDF1-207ENST00000472390 POTEEQ6S8J3 1075 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms