RNA–Protein interactions for RNA: ENST00000472221.5

SEC61A2-212, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2

Gene SEC61A2, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-212ENST00000472221 SMCR8Q8TEV9 937 aaPredicted RBP20.55■□□□□ 0.88
SEC61A2-212ENST00000472221 BIN2Q9UBW5 565 aaPredicted RBP20.55■□□□□ 0.88
SEC61A2-212ENST00000472221 FPGT-TNNI3KV9GXZ4 949 aa20.55■□□□□ 0.88
SEC61A2-212ENST00000472221 CAP2P40123 477 aa20.54■□□□□ 0.88
SEC61A2-212ENST00000472221 FLT3LGP49771 235 aa20.54■□□□□ 0.88
SEC61A2-212ENST00000472221 UBXN2AP68543 259 aa20.54■□□□□ 0.88
SEC61A2-212ENST00000472221 ATP8B2P98198 1209 aa20.54■□□□□ 0.88
SEC61A2-212ENST00000472221 SPP2Q13103 211 aa20.54■□□□□ 0.88
SEC61A2-212ENST00000472221 UBE2Q1Q7Z7E8 422 aa20.54■□□□□ 0.88
SEC61A2-212ENST00000472221 PROCA1Q8NCQ7 364 aaPredicted RBP20.54■□□□□ 0.88
SEC61A2-212ENST00000472221 DBNDD2Q9BQY9 259 aa20.54■□□□□ 0.88
SEC61A2-212ENST00000472221 RNF208Q9H0X6 261 aa20.54■□□□□ 0.88
SEC61A2-212ENST00000472221 SNRKQ9NRH2 765 aa20.54■□□□□ 0.88
SEC61A2-212ENST00000472221 H0YGN5 161 aa20.53■□□□□ 0.88
SEC61A2-212ENST00000472221 ADCY3O60266 1144 aa20.53■□□□□ 0.88
SEC61A2-212ENST00000472221 TTC39AQ5SRH9 613 aa20.53■□□□□ 0.88
SEC61A2-212ENST00000472221 ZNF280CQ8ND82 737 aa20.53■□□□□ 0.88
SEC61A2-212ENST00000472221 TBC1D2Q9BYX2 928 aa20.53■□□□□ 0.88
SEC61A2-212ENST00000472221 HERC5Q9UII4 1024 aaKnown RBP20.53■□□□□ 0.88
SEC61A2-212ENST00000472221 COLQQ9Y215 455 aaPredicted RBP20.53■□□□□ 0.88
SEC61A2-212ENST00000472221 LOC285556D6RIA3 1793 aa20.53■□□□□ 0.88
SEC61A2-212ENST00000472221 CEP290O15078 2479 aa20.53■□□□□ 0.88
SEC61A2-212ENST00000472221 ATAD5Q96QE3 1844 aa20.53■□□□□ 0.88
SEC61A2-212ENST00000472221 MAST2Q6P0Q8 1798 aa20.52■□□□□ 0.88
SEC61A2-212ENST00000472221 TNPO2O14787 897 aaKnown RBP20.52■□□□□ 0.88
SEC61A2-212ENST00000472221 CCDC158Q5M9N0 1113 aa20.52■□□□□ 0.88
SEC61A2-212ENST00000472221 NAA16Q6N069 864 aaPredicted RBP20.52■□□□□ 0.88
SEC61A2-212ENST00000472221 ANKRD13CQ8N6S4 541 aa20.52■□□□□ 0.88
SEC61A2-212ENST00000472221 UNC93B1Q9H1C4 597 aa20.52■□□□□ 0.88
SEC61A2-212ENST00000472221 AATFQ9NY61 560 aaKnown RBP eCLIP20.52■□□□□ 0.88
SEC61A2-212ENST00000472221 PNMA3Q9UL41 463 aa20.52■□□□□ 0.88
SEC61A2-212ENST00000472221 SIPA1L1O43166 1804 aa20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 BAG3O95817 575 aa20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 CYP2E1P05181 493 aaPredicted RBP20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 ELNP15502 786 aa20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 PPP4CP60510 307 aa20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 OS9Q13438 667 aaPredicted RBP20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 IRF5Q13568 498 aa20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 FAM110CQ1W6H9 321 aa20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 ADGRA1Q86SQ6 560 aa20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 PXYLP1Q8TE99 480 aa20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 ZNF512BQ96KM6 892 aaPredicted RBP20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 NOL10Q9BSC4 688 aaKnown RBP20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 DHX36Q9H2U1 1008 aaKnown RBP20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 C1orf115Q9H7X2 142 aa20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 PI4KBQ9UBF8 816 aa20.51■□□□□ 0.87
SEC61A2-212ENST00000472221 USP17L5A8MUK1 530 aa20.5■□□□□ 0.87
SEC61A2-212ENST00000472221 SURF6O75683 361 aaKnown RBP20.5■□□□□ 0.87
SEC61A2-212ENST00000472221 FXR1P51114 621 aaKnown RBP eCLIP20.5■□□□□ 0.87
SEC61A2-212ENST00000472221 HMGCS2P54868 508 aa20.5■□□□□ 0.87
SEC61A2-212ENST00000472221 SH3D19Q5HYK7 790 aa20.5■□□□□ 0.87
SEC61A2-212ENST00000472221 U2AF1L4Q8WU68 220 aaKnown RBP20.5■□□□□ 0.87
SEC61A2-212ENST00000472221 NOP58Q9Y2X3 529 aaKnown RBP20.5■□□□□ 0.87
SEC61A2-212ENST00000472221 INHAP05111 366 aa20.49■□□□□ 0.87
SEC61A2-212ENST00000472221 PLCG2P16885 1265 aa20.49■□□□□ 0.87
SEC61A2-212ENST00000472221 TGFBRAP1Q8WUH2 860 aa20.49■□□□□ 0.87
SEC61A2-212ENST00000472221 FLT1P17948 1338 aa20.49■□□□□ 0.87
SEC61A2-212ENST00000472221 CDK5RAP2Q96SN8 1893 aa20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 ZBTB7BO15156 539 aaPredicted RBP20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 IGSF3O75054 1194 aa20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 SGPL1O95470 568 aa20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 ZAP70P43403 619 aa20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 GCLCP48506 637 aaPredicted RBP20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 PABPC4Q13310 644 aaKnown RBP eCLIP20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 METTL16Q86W50 562 aaKnown RBP20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 MAPKAPK5Q8IW41 473 aa20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 DPF3Q92784 378 aa20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 COA7Q96BR5 231 aa20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 DNAJC18Q9H819 358 aa20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 AS3MTQ9HBK9 375 aa20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 PIH1D3Q9NQM4 214 aaKnown RBP20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 DBNLQ9UJU6 430 aaKnown RBP20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 DOCK3Q8IZD9 2030 aa20.48■□□□□ 0.87
SEC61A2-212ENST00000472221 MYO5AQ9Y4I1 1855 aaKnown RBP20.47■□□□□ 0.87
SEC61A2-212ENST00000472221 RLBP1P12271 317 aa20.47■□□□□ 0.87
SEC61A2-212ENST00000472221 JAG1P78504 1218 aa20.47■□□□□ 0.87
SEC61A2-212ENST00000472221 FTSJ3Q8IY81 847 aaKnown RBP20.47■□□□□ 0.87
SEC61A2-212ENST00000472221 WDR18Q9BV38 432 aa20.47■□□□□ 0.87
SEC61A2-212ENST00000472221 ASCC2Q9H1I8 757 aaPredicted RBP20.47■□□□□ 0.87
SEC61A2-212ENST00000472221 TLR7Q9NYK1 1049 aaKnown RBP20.47■□□□□ 0.87
SEC61A2-212ENST00000472221 FOCADQ5VW36 1801 aa20.47■□□□□ 0.87
SEC61A2-212ENST00000472221 FOXP4Q8IVH2 680 aaPredicted RBP20.46■□□□□ 0.87
SEC61A2-212ENST00000472221 ITPRIPQ8IWB1 547 aa20.46■□□□□ 0.87
SEC61A2-212ENST00000472221 HTATIP2Q9BUP3 242 aa20.46■□□□□ 0.87
SEC61A2-212ENST00000472221 PALD1Q9ULE6 856 aa20.46■□□□□ 0.87
SEC61A2-212ENST00000472221 FARP2O94887 1054 aaPredicted RBP20.45■□□□□ 0.86
SEC61A2-212ENST00000472221 ASNSP08243 561 aa20.45■□□□□ 0.86
SEC61A2-212ENST00000472221 BACE1P56817 501 aa20.45■□□□□ 0.86
SEC61A2-212ENST00000472221 HNRNPUQ00839 825 aaKnown RBP eCLIP20.45■□□□□ 0.86
SEC61A2-212ENST00000472221 MTMR2Q13614 643 aa20.45■□□□□ 0.86
SEC61A2-212ENST00000472221 EAF2Q96CJ1 260 aaPredicted RBP20.45■□□□□ 0.86
SEC61A2-212ENST00000472221 CCDC8Q9H0W5 538 aaPredicted RBP20.45■□□□□ 0.86
SEC61A2-212ENST00000472221 PAK6Q9NQU5 681 aaPredicted RBP20.45■□□□□ 0.86
SEC61A2-212ENST00000472221 TAOK2Q9UL54 1235 aa20.45■□□□□ 0.86
SEC61A2-212ENST00000472221 RANBP2P49792 3224 aaKnown RBP20.45■□□□□ 0.86
SEC61A2-212ENST00000472221 CAPN2P17655 700 aa20.44■□□□□ 0.86
SEC61A2-212ENST00000472221 DYNLL1P63167 89 aaKnown RBP20.44■□□□□ 0.86
SEC61A2-212ENST00000472221 SHROOM1Q2M3G4 852 aaPredicted RBP20.44■□□□□ 0.86
SEC61A2-212ENST00000472221 CHRDL2Q6WN34 429 aa20.44■□□□□ 0.86
SEC61A2-212ENST00000472221 DEFB118Q96PH6 123 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms