RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 H2AFB1P0C5Y9 115 aa7.55□□□□□ -1.2
CDHR3-208ENST00000471910 H2AFB2P0C5Z0 115 aa7.55□□□□□ -1.2
CDHR3-208ENST00000471910 HCLS1P14317 486 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-208ENST00000471910 RING1Q06587 406 aa7.55□□□□□ -1.2
CDHR3-208ENST00000471910 PRR23CQ6ZRP0 262 aa7.55□□□□□ -1.2
CDHR3-208ENST00000471910 EZH1Q92800 747 aaPredicted RBP7.55□□□□□ -1.2
CDHR3-208ENST00000471910 FAM83CQ9BQN1 747 aa7.55□□□□□ -1.2
CDHR3-208ENST00000471910 WNT10AQ9GZT5 417 aa7.55□□□□□ -1.2
CDHR3-208ENST00000471910 ACSS3Q9H6R3 686 aa7.55□□□□□ -1.2
CDHR3-208ENST00000471910 INPP5FQ9Y2H2 1132 aa7.55□□□□□ -1.2
CDHR3-208ENST00000471910 DAGLAQ9Y4D2 1042 aa7.55□□□□□ -1.2
CDHR3-208ENST00000471910 NFICP08651 508 aa7.54□□□□□ -1.2
CDHR3-208ENST00000471910 CDK8P49336 464 aa7.54□□□□□ -1.2
CDHR3-208ENST00000471910 RAD51AP2Q09MP3 1159 aa7.54□□□□□ -1.2
CDHR3-208ENST00000471910 PAK2Q13177 524 aa7.54□□□□□ -1.2
CDHR3-208ENST00000471910 ZBTB37Q5TC79 503 aa7.54□□□□□ -1.2
CDHR3-208ENST00000471910 REC114Q7Z4M0 266 aa7.54□□□□□ -1.2
CDHR3-208ENST00000471910 VPS37DQ86XT2 251 aa7.54□□□□□ -1.2
CDHR3-208ENST00000471910 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDHR3-208ENST00000471910 GIMAP7Q8NHV1 300 aa7.54□□□□□ -1.2
CDHR3-208ENST00000471910 EAF1Q96JC9 268 aaPredicted RBP7.54□□□□□ -1.2
CDHR3-208ENST00000471910 LRRC3Q9BY71 257 aa7.54□□□□□ -1.2
CDHR3-208ENST00000471910 UBP1Q9NZI7 540 aa7.54□□□□□ -1.2
CDHR3-208ENST00000471910 MCM4P33991 863 aa7.53□□□□□ -1.2
CDHR3-208ENST00000471910 ZNF165P49910 485 aa7.53□□□□□ -1.2
CDHR3-208ENST00000471910 MLECQ14165 292 aa7.53□□□□□ -1.2
CDHR3-208ENST00000471910 SEZ6Q53EL9 994 aa7.53□□□□□ -1.2
CDHR3-208ENST00000471910 FBXO27Q8NI29 283 aa7.53□□□□□ -1.2
CDHR3-208ENST00000471910 ACBD3Q9H3P7 528 aa7.53□□□□□ -1.2
CDHR3-208ENST00000471910 GSC2O15499 205 aa7.52□□□□□ -1.21
CDHR3-208ENST00000471910 PGRP06401 933 aa7.52□□□□□ -1.21
CDHR3-208ENST00000471910 GRK4P32298 578 aa7.52□□□□□ -1.21
CDHR3-208ENST00000471910 COL9A2Q14055 689 aaPredicted RBP7.52□□□□□ -1.21
CDHR3-208ENST00000471910 HID1Q8IV36 788 aa7.52□□□□□ -1.21
CDHR3-208ENST00000471910 ISL2Q96A47 359 aa7.52□□□□□ -1.21
CDHR3-208ENST00000471910 GPRASP2Q96D09 838 aa7.52□□□□□ -1.21
CDHR3-208ENST00000471910 SEMA6CQ9H3T2 930 aa7.52□□□□□ -1.21
CDHR3-208ENST00000471910 CAPN10Q9HC96 672 aa7.52□□□□□ -1.21
CDHR3-208ENST00000471910 NEFMP07197 916 aa7.51□□□□□ -1.21
CDHR3-208ENST00000471910 PLCG1P19174 1290 aa7.51□□□□□ -1.21
CDHR3-208ENST00000471910 SLC51AQ86UW1 340 aa7.51□□□□□ -1.21
CDHR3-208ENST00000471910 SLITRK4Q8IW52 837 aa7.51□□□□□ -1.21
CDHR3-208ENST00000471910 C7orf69Q9H7B7 122 aa7.51□□□□□ -1.21
CDHR3-208ENST00000471910 LGR6Q9HBX8 967 aa7.51□□□□□ -1.21
CDHR3-208ENST00000471910 BRMS1Q9HCU9 246 aa7.51□□□□□ -1.21
CDHR3-208ENST00000471910 ADAM30Q9UKF2 790 aa7.51□□□□□ -1.21
CDHR3-208ENST00000471910 HMX2A2RU54 273 aa7.5□□□□□ -1.21
CDHR3-208ENST00000471910 GRIN3BO60391 1043 aa7.5□□□□□ -1.21
CDHR3-208ENST00000471910 CRKP46108 304 aa7.5□□□□□ -1.21
CDHR3-208ENST00000471910 NKAPLQ5M9Q1 402 aa7.5□□□□□ -1.21
CDHR3-208ENST00000471910 REXO1Q8N1G1 1221 aaKnown RBP7.5□□□□□ -1.21
CDHR3-208ENST00000471910 GJA8P48165 433 aa7.49□□□□□ -1.21
CDHR3-208ENST00000471910 ZC3H6P61129 1189 aaKnown RBP7.49□□□□□ -1.21
CDHR3-208ENST00000471910 RSPO4Q2I0M5 234 aaPredicted RBP7.49□□□□□ -1.21
CDHR3-208ENST00000471910 RNF43Q68DV7 783 aa7.49□□□□□ -1.21
CDHR3-208ENST00000471910 SLC6A19Q695T7 634 aa7.49□□□□□ -1.21
CDHR3-208ENST00000471910 RASGRP4Q8TDF6 673 aa7.49□□□□□ -1.21
CDHR3-208ENST00000471910 POLR3KQ9Y2Y1 108 aaPredicted RBP7.49□□□□□ -1.21
CDHR3-208ENST00000471910 PCDHB14Q9Y5E9 798 aa7.49□□□□□ -1.21
CDHR3-208ENST00000471910 PRR36Q9H6K5 1346 aa7.49□□□□□ -1.21
CDHR3-208ENST00000471910 FURINP09958 794 aa7.48□□□□□ -1.21
CDHR3-208ENST00000471910 NTF4P34130 210 aa7.48□□□□□ -1.21
CDHR3-208ENST00000471910 TNNI2P48788 182 aa7.48□□□□□ -1.21
CDHR3-208ENST00000471910 YARSP54577 528 aaKnown RBP7.48□□□□□ -1.21
CDHR3-208ENST00000471910 GK5Q6ZS86 529 aa7.48□□□□□ -1.21
CDHR3-208ENST00000471910 TBC1D32Q96NH3 1257 aa7.48□□□□□ -1.21
CDHR3-208ENST00000471910 FERD3LQ96RJ6 166 aa7.48□□□□□ -1.21
CDHR3-208ENST00000471910 FOXQ1Q9C009 403 aa7.48□□□□□ -1.21
CDHR3-208ENST00000471910 PRKAG2Q9UGJ0 569 aa7.48□□□□□ -1.21
CDHR3-208ENST00000471910 CORINQ9Y5Q5 1042 aa7.48□□□□□ -1.21
CDHR3-208ENST00000471910 DYRK3O43781 588 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 LRIG2O94898 1065 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 ATE1O95260 518 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 HTR3BO95264 441 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 IGLV1-40P01703 118 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 IMPDH2P12268 514 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 FSTP19883 344 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 CAP2P40123 477 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 RANGAP1P46060 587 aaPredicted RBP7.47□□□□□ -1.21
CDHR3-208ENST00000471910 CYP27A1Q02318 531 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 NFIAQ12857 509 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 LRRFIP1Q32MZ4 808 aaKnown RBP7.47□□□□□ -1.21
CDHR3-208ENST00000471910 TMEM201Q5SNT2 666 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 SEZ6L2Q6UXD5 910 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 MCATQ8IVS2 390 aaKnown RBP7.47□□□□□ -1.21
CDHR3-208ENST00000471910 MFSD2AQ8NA29 543 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 SEC16BQ96JE7 1060 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 DBNDD2Q9BQY9 259 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 EHMT1Q9H9B1 1298 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 REV1Q9UBZ9 1251 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 EFR3BQ9Y2G0 817 aa7.47□□□□□ -1.21
CDHR3-208ENST00000471910 DUSP27Q5VZP5 1158 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 FBXW10Q5XX13 1052 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 ZAR1Q86SH2 424 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 MRPL41Q8IXM3 137 aaKnown RBP7.46□□□□□ -1.22
CDHR3-208ENST00000471910 SLC43A3Q8NBI5 491 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 FAM13CQ8NE31 585 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 CPLX3Q8WVH0 158 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 TMEM87BQ96K49 555 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 MFSD14AQ96MC6 490 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms