RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 SGMS1Q86VZ5 419 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 METTL16Q86W50 562 aaKnown RBP10.49□□□□□ -0.73
LMCD1-207ENST00000470776 AMOTL1Q8IY63 956 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 OGFOD1Q8N543 542 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 ESR2Q92731 530 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 BRF1Q92994 677 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 OSBPL5Q9H0X9 879 aaPredicted RBP10.49□□□□□ -0.73
LMCD1-207ENST00000470776 DDX4Q9NQI0 724 aaKnown RBP10.49□□□□□ -0.73
LMCD1-207ENST00000470776 CHMP5Q9NZZ3 219 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 FAM198AQ9UFP1 575 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 PCDHAC2Q9Y5I4 1007 aa10.49□□□□□ -0.73
LMCD1-207ENST00000470776 COL2A1P02458 1487 aaPredicted RBP10.49□□□□□ -0.73
LMCD1-207ENST00000470776 MYH2Q9UKX2 1941 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 PFKFB2O60825 505 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 KDM4AO75164 1064 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 EVX2Q03828 476 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 NFIAQ12857 509 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 DLGAP5Q15398 846 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 SEC23AQ15436 765 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 CHST3Q7LGC8 479 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 TMTC2Q8N394 836 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 ANKS1AQ92625 1134 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 CHMP4CQ96CF2 233 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 LRRC2Q9BYS8 371 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 EHD4Q9H223 541 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 DHX36Q9H2U1 1008 aaKnown RBP10.48□□□□□ -0.73
LMCD1-207ENST00000470776 TCP11L1Q9NUJ3 509 aa10.48□□□□□ -0.73
LMCD1-207ENST00000470776 ISY1Q9ULR0 285 aaKnown RBP10.48□□□□□ -0.73
LMCD1-207ENST00000470776 ANGEL1Q9UNK9 670 aaKnown RBP10.48□□□□□ -0.73
LMCD1-207ENST00000470776 DDX60LQ5H9U9 1706 aaKnown RBP10.47□□□□□ -0.73
LMCD1-207ENST00000470776 GRIN3BO60391 1043 aa10.47□□□□□ -0.73
LMCD1-207ENST00000470776 PDIA3P30101 505 aaKnown RBP10.47□□□□□ -0.73
LMCD1-207ENST00000470776 NOVP48745 357 aa10.47□□□□□ -0.73
LMCD1-207ENST00000470776 RBM5P52756 815 aaKnown RBP eCLIP10.47□□□□□ -0.73
LMCD1-207ENST00000470776 RCAN1P53805 252 aa10.47□□□□□ -0.73
LMCD1-207ENST00000470776 SPDYE2Q495Y8 402 aa10.47□□□□□ -0.73
LMCD1-207ENST00000470776 FOXP4Q8IVH2 680 aaPredicted RBP10.47□□□□□ -0.73
LMCD1-207ENST00000470776 LARP6Q9BRS8 491 aaKnown RBP10.47□□□□□ -0.73
LMCD1-207ENST00000470776 TDRD3Q9H7E2 651 aaKnown RBP10.47□□□□□ -0.73
LMCD1-207ENST00000470776 LY9Q9HBG7 655 aa10.47□□□□□ -0.73
LMCD1-207ENST00000470776 ZNF287Q9HBT7 754 aa10.47□□□□□ -0.73
LMCD1-207ENST00000470776 GPHNQ9NQX3 736 aaPredicted RBP10.47□□□□□ -0.73
LMCD1-207ENST00000470776 ZNF70Q9UC06 446 aaPredicted RBP10.47□□□□□ -0.73
LMCD1-207ENST00000470776 SAP30BPQ9UHR5 308 aaKnown RBP10.47□□□□□ -0.73
LMCD1-207ENST00000470776 ATRNL1Q5VV63 1379 aa10.47□□□□□ -0.73
LMCD1-207ENST00000470776 DDX11L8A8MPP1 907 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 IFIT3O14879 490 aaKnown RBP10.46□□□□□ -0.73
LMCD1-207ENST00000470776 RASA1P20936 1047 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 CDK8P49336 464 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 GMPSP49915 693 aaPredicted RBP10.46□□□□□ -0.73
LMCD1-207ENST00000470776 FGD1P98174 961 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 APOBRQ0VD83 1088 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 CCDC178Q5BJE1 867 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 RRP12Q5JTH9 1297 aaKnown RBP10.46□□□□□ -0.73
LMCD1-207ENST00000470776 NOL8Q76FK4 1167 aaKnown RBP10.46□□□□□ -0.73
LMCD1-207ENST00000470776 FAM83AQ86UY5 434 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 ZFPM1Q8IX07 1006 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 GPC2Q8N158 579 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 GTF3C6Q969F1 213 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 DYNLL2Q96FJ2 89 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 LLPHQ9BRT6 129 aaKnown RBP10.46□□□□□ -0.73
LMCD1-207ENST00000470776 MYOZ2Q9NPC6 264 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 SWAP70Q9UH65 585 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 BRPF3Q9ULD4 1205 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.46□□□□□ -0.73
LMCD1-207ENST00000470776 ZNF541Q9H0D2 1346 aa10.46□□□□□ -0.73
LMCD1-207ENST00000470776 NID2Q14112 1375 aa10.46□□□□□ -0.74
LMCD1-207ENST00000470776 WNT10BO00744 389 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 RANBP6O60518 1105 aaKnown RBP10.45□□□□□ -0.74
LMCD1-207ENST00000470776 HSP90AA1P07900 732 aaKnown RBP10.45□□□□□ -0.74
LMCD1-207ENST00000470776 SCRN1Q12765 414 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 PICALMQ13492 652 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 SART3Q15020 963 aaKnown RBP10.45□□□□□ -0.74
LMCD1-207ENST00000470776 TMEM67Q5HYA8 995 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 SH3BP5LQ7L8J4 393 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 IQCA1Q86XH1 822 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 DGKHQ86XP1 1220 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 ZNF444Q8N0Y2 327 aaPredicted RBP10.45□□□□□ -0.74
LMCD1-207ENST00000470776 NECAB1Q8N987 351 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 SPRYD3Q8NCJ5 442 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 NEDD1Q8NHV4 660 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 SMARCC2Q8TAQ2 1214 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 FAM151AQ8WW52 585 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 ZSCAN10Q96SZ4 725 aaPredicted RBP10.45□□□□□ -0.74
LMCD1-207ENST00000470776 SLKQ9H2G2 1235 aaPredicted RBP10.45□□□□□ -0.74
LMCD1-207ENST00000470776 MKNK2Q9HBH9 465 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 TOMM22Q9NS69 142 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
LMCD1-207ENST00000470776 TMOD2Q9NZR1 351 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 PI4KBQ9UBF8 816 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 PGAP2Q9UHJ9 254 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 CNOT7Q9UIV1 285 aaKnown RBP10.45□□□□□ -0.74
LMCD1-207ENST00000470776 SERPINB13Q9UIV8 391 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 HPS5Q9UPZ3 1129 aa10.45□□□□□ -0.74
LMCD1-207ENST00000470776 PLIN4Q96Q06 1357 aa10.44□□□□□ -0.74
LMCD1-207ENST00000470776 TNKSO95271 1327 aa10.44□□□□□ -0.74
LMCD1-207ENST00000470776 ZC3H4Q9UPT8 1303 aaKnown RBP10.44□□□□□ -0.74
LMCD1-207ENST00000470776 KLF18A0A0U1RQI7 1052 aa10.44□□□□□ -0.74
LMCD1-207ENST00000470776 ERICH2A1L162 156 aa10.44□□□□□ -0.74
LMCD1-207ENST00000470776 DDTLA6NHG4 134 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms