RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 UPF2Q9HAU5 1272 aaKnown RBP13.38□□□□□ -0.27
SREBF1-209ENST00000470247 PI4KBQ9UBF8 816 aa13.38□□□□□ -0.27
SREBF1-209ENST00000470247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.38□□□□□ -0.27
SREBF1-209ENST00000470247 MYH1P12882 1939 aa13.37□□□□□ -0.27
SREBF1-209ENST00000470247 TNNI2P48788 182 aa13.37□□□□□ -0.27
SREBF1-209ENST00000470247 CDK8P49336 464 aa13.37□□□□□ -0.27
SREBF1-209ENST00000470247 TNFAIP1Q13829 316 aa13.37□□□□□ -0.27
SREBF1-209ENST00000470247 EAPPQ56P03 285 aaPredicted RBP13.37□□□□□ -0.27
SREBF1-209ENST00000470247 RNF20Q5VTR2 975 aa13.37□□□□□ -0.27
SREBF1-209ENST00000470247 PRAMEF18Q5VWM3 479 aa13.37□□□□□ -0.27
SREBF1-209ENST00000470247 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
SREBF1-209ENST00000470247 FOXP4Q8IVH2 680 aaPredicted RBP13.37□□□□□ -0.27
SREBF1-209ENST00000470247 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
SREBF1-209ENST00000470247 EHD4Q9H223 541 aa13.37□□□□□ -0.27
SREBF1-209ENST00000470247 NAV1Q8NEY1 1877 aa13.37□□□□□ -0.27
SREBF1-209ENST00000470247 MCCP23508 829 aa13.36□□□□□ -0.27
SREBF1-209ENST00000470247 RRP1BQ14684 758 aaKnown RBP13.36□□□□□ -0.27
SREBF1-209ENST00000470247 NBPF12Q5TAG4 269 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-209ENST00000470247 USP48Q86UV5 1035 aa13.36□□□□□ -0.27
SREBF1-209ENST00000470247 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
SREBF1-209ENST00000470247 DCPSQ96C86 337 aaKnown RBP13.36□□□□□ -0.27
SREBF1-209ENST00000470247 CSRNP1Q96S65 589 aa13.36□□□□□ -0.27
SREBF1-209ENST00000470247 SERPINB13Q9UIV8 391 aa13.36□□□□□ -0.27
SREBF1-209ENST00000470247 SIPA1L1O43166 1804 aa13.36□□□□□ -0.27
SREBF1-209ENST00000470247 NEDD4P46934 1319 aa13.36□□□□□ -0.27
SREBF1-209ENST00000470247 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 ADM5C9JUS6 153 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 ORC4O43929 436 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 TBC1D12O60347 775 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 HLA-DOAP06340 250 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 ZKSCAN1P17029 563 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-209ENST00000470247 SHMT1P34896 483 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 MFSD6Q6ZSS7 791 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 KRT26Q7Z3Y9 468 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 LDHDQ86WU2 507 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 MB21D2Q8IYB1 491 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-209ENST00000470247 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
SREBF1-209ENST00000470247 TM6SF1Q9BZW5 370 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 PPP2R3BQ9Y5P8 575 aa13.35□□□□□ -0.27
SREBF1-209ENST00000470247 B4E1Z4 1266 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 KIF3CO14782 793 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 PRDM1O75626 825 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 PCP11498 1178 aaKnown RBP13.34□□□□□ -0.27
SREBF1-209ENST00000470247 RASA1P20936 1047 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
SREBF1-209ENST00000470247 KRT32Q14532 448 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 MAP1SQ66K74 1059 aaPredicted RBP13.34□□□□□ -0.27
SREBF1-209ENST00000470247 TATDN1Q6P1N9 297 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 CYB5R4Q7L1T6 521 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 MIGA2Q7L4E1 593 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 SULF1Q8IWU6 871 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 AMOTL1Q8IY63 956 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 JAKMIP1Q96N16 626 aaKnown RBP13.34□□□□□ -0.27
SREBF1-209ENST00000470247 NEK1Q96PY6 1258 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 RNF41Q9H4P4 317 aaPredicted RBP13.34□□□□□ -0.27
SREBF1-209ENST00000470247 TAOK2Q9UL54 1235 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 LAMA4Q16363 1823 aa13.34□□□□□ -0.27
SREBF1-209ENST00000470247 PHF20L1A8MW92 1017 aa13.33□□□□□ -0.28
SREBF1-209ENST00000470247 SLC3A2P08195 630 aaKnown RBP13.33□□□□□ -0.28
SREBF1-209ENST00000470247 CPA1P15085 419 aa13.33□□□□□ -0.28
SREBF1-209ENST00000470247 ANTXR2P58335 489 aa13.33□□□□□ -0.28
SREBF1-209ENST00000470247 JAG1P78504 1218 aa13.33□□□□□ -0.28
SREBF1-209ENST00000470247 PDE4BQ07343 736 aa13.33□□□□□ -0.28
SREBF1-209ENST00000470247 CDC37L1Q7L3B6 337 aa13.33□□□□□ -0.28
SREBF1-209ENST00000470247 NCOA7Q8NI08 942 aa13.33□□□□□ -0.28
SREBF1-209ENST00000470247 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
SREBF1-209ENST00000470247 ZSWIM5Q9P217 1185 aa13.33□□□□□ -0.28
SREBF1-209ENST00000470247 SWAP70Q9UH65 585 aa13.33□□□□□ -0.28
SREBF1-209ENST00000470247 HERC5Q9UII4 1024 aaKnown RBP13.33□□□□□ -0.28
SREBF1-209ENST00000470247 CLEC11AQ9Y240 323 aa13.33□□□□□ -0.28
SREBF1-209ENST00000470247 SSC5DA1L4H1 1573 aa13.32□□□□□ -0.28
SREBF1-209ENST00000470247 PSMA5P28066 241 aa13.32□□□□□ -0.28
SREBF1-209ENST00000470247 FMR1Q06787 632 aaKnown RBP eCLIP13.32□□□□□ -0.28
SREBF1-209ENST00000470247 SHROOM1Q2M3G4 852 aaPredicted RBP13.32□□□□□ -0.28
SREBF1-209ENST00000470247 UPF3BQ9BZI7 483 aaKnown RBP13.32□□□□□ -0.28
SREBF1-209ENST00000470247 KRT23Q9C075 422 aa13.32□□□□□ -0.28
SREBF1-209ENST00000470247 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
SREBF1-209ENST00000470247 ZNF112Q9UJU3 913 aa13.32□□□□□ -0.28
SREBF1-209ENST00000470247 LAMB1P07942 1786 aa13.32□□□□□ -0.28
SREBF1-209ENST00000470247 KDM4AO75164 1064 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 ITGBL1O95965 494 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-209ENST00000470247 AKR1B1P15121 316 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 CASTP20810 708 aaKnown RBP13.31□□□□□ -0.28
SREBF1-209ENST00000470247 RPS6KB1P23443 525 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 FAM47AQ5JRC9 791 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 RRP12Q5JTH9 1297 aaKnown RBP13.31□□□□□ -0.28
SREBF1-209ENST00000470247 RUFY3Q7L099 469 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 DHX32Q7L7V1 743 aaKnown RBP13.31□□□□□ -0.28
SREBF1-209ENST00000470247 CHST3Q7LGC8 479 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 CRACR2BQ8N4Y2 399 aaPredicted RBP13.31□□□□□ -0.28
SREBF1-209ENST00000470247 CDCA5Q96FF9 252 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 TCEANC2Q96MN5 208 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 TTC14Q96N46 770 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 CNNM2Q9H8M5 875 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.31□□□□□ -0.28
SREBF1-209ENST00000470247 MKNK2Q9HBH9 465 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 IL17RBQ9NRM6 502 aa13.31□□□□□ -0.28
SREBF1-209ENST00000470247 FZD1Q9UP38 647 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms