RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 FOXC1Q12948 553 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 BIRC3Q13489 604 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 SIM2Q14190 667 aaPredicted RBP5.9□□□□□ -1.46
COL3A1-205ENST00000470167 CRYMQ14894 314 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 MYBPC3Q14896 1274 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 WTAPQ15007 396 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 IQCB1Q15051 598 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 AKNAD1Q5T1N1 836 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 ZNF697Q5TEC3 545 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 CYP2U1Q7Z449 544 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 SPATA21Q7Z572 469 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 DAAM2Q86T65 1068 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 CCDC144CPQ8IYA2 1237 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 KRT222Q8N1A0 295 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 THEMISQ8N1K5 641 aaPredicted RBP5.9□□□□□ -1.46
COL3A1-205ENST00000470167 MIPOL1Q8TD10 442 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 USP33Q8TEY7 942 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 TCP11Q8WWU5 503 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 ATRIPQ8WXE1 791 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 JAKMIP2Q96AA8 810 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 ERP27Q96DN0 273 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 SH3GL1Q99961 368 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 ANO2Q9NQ90 1003 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 ZNF446Q9NWS9 450 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 MKL2Q9ULH7 1088 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 G3BP2Q9UN86 482 aaKnown RBP5.9□□□□□ -1.46
COL3A1-205ENST00000470167 GJA3Q9Y6H8 435 aa5.9□□□□□ -1.46
COL3A1-205ENST00000470167 TMEM94Q12767 1356 aa5.9□□□□□ -1.47
COL3A1-205ENST00000470167 TBKBP1A7MCY6 615 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 H3BRB1 525 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 WASLO00401 505 aaPredicted RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 IFRD1O00458 451 aaPredicted RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 RNASEH2AO75792 299 aaKnown RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 RPN1P04843 607 aaKnown RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 BTF3P20290 206 aaKnown RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 ERCC5P28715 1186 aaPredicted RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 EPHA4P54764 986 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 ZBED6P86452 979 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 FAM160A1Q05DH4 1040 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 NNTQ13423 1086 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 SAFB2Q14151 953 aaKnown RBP eCLIP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 ARHGEF6Q15052 776 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 PPP2R5BQ15173 497 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 IFFO2Q5TF58 517 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 C11orf74Q86VG3 221 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 CHPFQ8IZ52 775 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 TXLNBQ8N3L3 684 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 IQUBQ8NA54 791 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 GOLGA5Q8TBA6 731 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 SCG3Q8WXD2 468 aaKnown RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 MAML1Q92585 1016 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 ZNF496Q96IT1 587 aaPredicted RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 TCHPQ9BT92 498 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 LRRCC1Q9C099 1032 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 TANGO6Q9C0B7 1094 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 TSPAN10Q9H1Z9 355 aaPredicted RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 VPS33BQ9H267 617 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 TUT1Q9H6E5 874 aaKnown RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 PGPEP1Q9NXJ5 209 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 CLIC5Q9NZA1 410 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 BIN2Q9UBW5 565 aaPredicted RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 WDR37Q9Y2I8 494 aa5.89□□□□□ -1.47
COL3A1-205ENST00000470167 NOSIPQ9Y314 301 aaKnown RBP5.89□□□□□ -1.47
COL3A1-205ENST00000470167 GTPBP10A4D1E9 387 aaKnown RBP5.88□□□□□ -1.47
COL3A1-205ENST00000470167 C19orf81C9J6K1 198 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 EIF3FO00303 357 aaPredicted RBP5.88□□□□□ -1.47
COL3A1-205ENST00000470167 BACH1O14867 736 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 NEBLO76041 1014 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 LDHAP00338 332 aaKnown RBP5.88□□□□□ -1.47
COL3A1-205ENST00000470167 FOSP01100 380 aaPredicted RBP5.88□□□□□ -1.47
COL3A1-205ENST00000470167 GCFC2P16383 781 aaKnown RBP5.88□□□□□ -1.47
COL3A1-205ENST00000470167 IGFBP4P22692 258 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 VAMP1P23763 118 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 NF2P35240 595 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 RAB27AP51159 221 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 CDR1P51861 262 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 MTMR3Q13615 1198 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 TCEAL1Q15170 157 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 CCDC152Q4G0S7 254 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 TBCELQ5QJ74 424 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 CCDC122Q5T0U0 273 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 ZCCHC8Q6NZY4 707 aaKnown RBP5.88□□□□□ -1.47
COL3A1-205ENST00000470167 SRLQ86TD4 932 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 TMEM110Q86TL2 294 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 RSPH3Q86UC2 560 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 FAM114A1Q8IWE2 563 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 ARL10Q8N8L6 244 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 ATP11CQ8NB49 1132 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 GPT2Q8TD30 523 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 GTF3C2Q8WUA4 911 aaPredicted RBP5.88□□□□□ -1.47
COL3A1-205ENST00000470167 PPM1EQ8WY54 764 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 N4BP2L2Q92802 583 aaPredicted RBP5.88□□□□□ -1.47
COL3A1-205ENST00000470167 TBC1D20Q96BZ9 403 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 UROC1Q96N76 676 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 FAM167BQ9BTA0 163 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 CAPS2Q9BXY5 557 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 PSD3Q9NYI0 1048 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 PKD2L1Q9P0L9 805 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 CFAP45Q9UL16 551 aa5.88□□□□□ -1.47
COL3A1-205ENST00000470167 ZKSCAN5Q9Y2L8 839 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms