RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 IFT74Q96LB3 600 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 PAIP2Q9BPZ3 127 aaKnown RBP17.66■□□□□ 0.42
BRAT1-204ENST00000469750 MTUS1Q9ULD2 1270 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 CETN3O15182 167 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 TFAP4Q01664 338 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 CSGALNACT2Q8N6G5 542 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 MLKLQ8NB16 471 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 SNX29Q8TEQ0 813 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 USP44Q9H0E7 712 aa17.66■□□□□ 0.42
BRAT1-204ENST00000469750 CALUO43852 315 aaPredicted RBP17.65■□□□□ 0.42
BRAT1-204ENST00000469750 NCAPH2Q6IBW4 605 aa17.65■□□□□ 0.42
BRAT1-204ENST00000469750 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.65■□□□□ 0.42
BRAT1-204ENST00000469750 V9GYY5 206 aaPredicted RBP17.65■□□□□ 0.42
BRAT1-204ENST00000469750 KCNQ3O43525 872 aa17.65■□□□□ 0.42
BRAT1-204ENST00000469750 SMAP1Q8IYB5 467 aaPredicted RBP17.65■□□□□ 0.42
BRAT1-204ENST00000469750 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.65■□□□□ 0.42
BRAT1-204ENST00000469750 KIFAP3Q92845 792 aa17.65■□□□□ 0.42
BRAT1-204ENST00000469750 ARPP21Q9UBL0 812 aaPredicted RBP17.65■□□□□ 0.42
BRAT1-204ENST00000469750 EXOC7Q9UPT5 735 aa17.65■□□□□ 0.42
BRAT1-204ENST00000469750 VAV2P52735 878 aa17.65■□□□□ 0.42
BRAT1-204ENST00000469750 SYNRGQ9UMZ2 1314 aa17.65■□□□□ 0.42
BRAT1-204ENST00000469750 ERBB4Q15303 1308 aa17.65■□□□□ 0.42
BRAT1-204ENST00000469750 TUBBP07437 444 aa17.65■□□□□ 0.42
BRAT1-204ENST00000469750 ARID4AP29374 1257 aaPredicted RBP17.65■□□□□ 0.42
BRAT1-204ENST00000469750 PAK1Q13153 545 aa17.65■□□□□ 0.42
BRAT1-204ENST00000469750 OTUD6BQ8N6M0 293 aa17.65■□□□□ 0.42
BRAT1-204ENST00000469750 MTRF1LQ9UGC7 380 aaKnown RBP17.65■□□□□ 0.42
BRAT1-204ENST00000469750 KRT5P13647 590 aa17.64■□□□□ 0.41
BRAT1-204ENST00000469750 TCP10Q12799 353 aa17.64■□□□□ 0.41
BRAT1-204ENST00000469750 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
BRAT1-204ENST00000469750 ZBED4O75132 1171 aa17.64■□□□□ 0.41
BRAT1-204ENST00000469750 MYCLP12524 364 aaPredicted RBP17.64■□□□□ 0.41
BRAT1-204ENST00000469750 ZNF202O95125 648 aa17.64■□□□□ 0.41
BRAT1-204ENST00000469750 PPARAQ07869 468 aa17.64■□□□□ 0.41
BRAT1-204ENST00000469750 MAPK8IP1Q9UQF2 711 aa17.64■□□□□ 0.41
BRAT1-204ENST00000469750 MNAT1P51948 309 aa17.64■□□□□ 0.41
BRAT1-204ENST00000469750 SEL1L2Q5TEA6 688 aa17.64■□□□□ 0.41
BRAT1-204ENST00000469750 BRDTQ58F21 947 aaPredicted RBP17.63■□□□□ 0.41
BRAT1-204ENST00000469750 TTC16Q8NEE8 873 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 TNFAIP3P21580 790 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 PPP1R7Q15435 360 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 STX10O60499 249 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 DLGAP5Q15398 846 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 NIM1KQ8IY84 436 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 ATRIPQ8WXE1 791 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 KCNJ14Q9UNX9 436 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 IVNS1ABPQ9Y6Y0 642 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 APBA3O96018 575 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 STRN3Q13033 797 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 CALCOCO2Q13137 446 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 CDC37L1Q7L3B6 337 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 IFT81Q8WYA0 676 aa17.63■□□□□ 0.41
BRAT1-204ENST00000469750 JAK2O60674 1132 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 CALCRLQ16602 461 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 CPXCR1Q8N123 301 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 ZBTB38Q8NAP3 1195 aaPredicted RBP17.62■□□□□ 0.41
BRAT1-204ENST00000469750 EDC3Q96F86 508 aaKnown RBP17.62■□□□□ 0.41
BRAT1-204ENST00000469750 TTC14Q96N46 770 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 CCDC94Q9BW85 323 aaPredicted RBP17.62■□□□□ 0.41
BRAT1-204ENST00000469750 DNM3Q9UQ16 869 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 RHOXF2BP0C7M4 288 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 FANCCQ00597 558 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 FBF1Q8TES7 1133 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 RHOXF2Q9BQY4 288 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 NOP56O00567 594 aaKnown RBP17.62■□□□□ 0.41
BRAT1-204ENST00000469750 HERC4Q5GLZ8 1057 aaPredicted RBP17.62■□□□□ 0.41
BRAT1-204ENST00000469750 TTLL7Q6ZT98 887 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.62■□□□□ 0.41
BRAT1-204ENST00000469750 USH1GQ495M9 461 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 MFSD14BQ5SR56 506 aa17.62■□□□□ 0.41
BRAT1-204ENST00000469750 KDM5AP29375 1690 aaKnown RBP17.61■□□□□ 0.41
BRAT1-204ENST00000469750 PCCAP05165 728 aaPredicted RBP17.61■□□□□ 0.41
BRAT1-204ENST00000469750 NLRP12P59046 1061 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 FAM47AQ5JRC9 791 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 REXO1Q8N1G1 1221 aaKnown RBP17.61■□□□□ 0.41
BRAT1-204ENST00000469750 CEP63Q96MT8 703 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 RBSNQ9H1K0 784 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 FAM135BQ49AJ0 1406 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 ATP2C2O75185 946 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 ATP2A2P16615 1042 aaKnown RBP17.61■□□□□ 0.41
BRAT1-204ENST00000469750 GTF2IP78347 998 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 CYP26C1Q6V0L0 522 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 NSMFQ6X4W1 530 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 TAF12Q16514 161 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 BEND3Q5T5X7 828 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 EAF2Q96CJ1 260 aaPredicted RBP17.61■□□□□ 0.41
BRAT1-204ENST00000469750 USP40Q9NVE5 1235 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 PPIP5K2O43314 1243 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 ARL1P40616 181 aaPredicted RBP17.61■□□□□ 0.41
BRAT1-204ENST00000469750 NUP58Q9BVL2 599 aa17.61■□□□□ 0.41
BRAT1-204ENST00000469750 TTF2Q9UNY4 1162 aaKnown RBP17.61■□□□□ 0.41
BRAT1-204ENST00000469750 CFBP00751 764 aa17.6■□□□□ 0.41
BRAT1-204ENST00000469750 ZNF654Q8IZM8 581 aa17.6■□□□□ 0.41
BRAT1-204ENST00000469750 CCDC63Q8NA47 563 aa17.6■□□□□ 0.41
BRAT1-204ENST00000469750 TEKT1Q969V4 418 aa17.6■□□□□ 0.41
BRAT1-204ENST00000469750 CCDC114Q96M63 670 aa17.6■□□□□ 0.41
BRAT1-204ENST00000469750 VPS54Q9P1Q0 977 aa17.6■□□□□ 0.41
BRAT1-204ENST00000469750 USP17L12C9JPN9 530 aa17.6■□□□□ 0.41
BRAT1-204ENST00000469750 USP17L21D6R901 530 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms