RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 IFNL1Q8IU54 200 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 KBTBD3Q8NAB2 608 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 MS4A4AQ96JQ5 239 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.76□□□□□ -0.53
SRRT-208ENST00000469602 SAP30BPQ9UHR5 308 aaKnown RBP11.76□□□□□ -0.53
SRRT-208ENST00000469602 HERC5Q9UII4 1024 aaKnown RBP11.76□□□□□ -0.53
SRRT-208ENST00000469602 PALD1Q9ULE6 856 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 PTPRFP10586 1907 aa11.76□□□□□ -0.53
SRRT-208ENST00000469602 BAZ2AQ9UIF9 1905 aaKnown RBP11.76□□□□□ -0.53
SRRT-208ENST00000469602 TESPA1A2RU30 521 aaPredicted RBP11.75□□□□□ -0.53
SRRT-208ENST00000469602 FAM196BA6NMK8 535 aa11.75□□□□□ -0.53
SRRT-208ENST00000469602 IGF2BP3O00425 579 aaKnown RBP eCLIP11.75□□□□□ -0.53
SRRT-208ENST00000469602 ALDH1A1P00352 501 aa11.75□□□□□ -0.53
SRRT-208ENST00000469602 CHGBP05060 677 aa11.75□□□□□ -0.53
SRRT-208ENST00000469602 GTF2A2P52657 109 aa11.75□□□□□ -0.53
SRRT-208ENST00000469602 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
SRRT-208ENST00000469602 METTL16Q86W50 562 aaKnown RBP11.75□□□□□ -0.53
SRRT-208ENST00000469602 SCYL3Q8IZE3 742 aa11.75□□□□□ -0.53
SRRT-208ENST00000469602 LCORLQ8N3X6 602 aa11.75□□□□□ -0.53
SRRT-208ENST00000469602 CRNKL1Q9BZJ0 848 aaKnown RBP11.75□□□□□ -0.53
SRRT-208ENST00000469602 LNPKQ9C0E8 428 aa11.75□□□□□ -0.53
SRRT-208ENST00000469602 PICK1Q9NRD5 415 aa11.75□□□□□ -0.53
SRRT-208ENST00000469602 STAP2Q9UGK3 403 aa11.75□□□□□ -0.53
SRRT-208ENST00000469602 MBD4O95243 580 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 HLA-DOAP06340 250 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 PTPRAP18433 802 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 PDE1AP54750 535 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 NUCB1Q02818 461 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 SNAPC2Q13487 334 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 OTUD7BQ6GQQ9 843 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 FOXP4Q8IVH2 680 aaPredicted RBP11.74□□□□□ -0.53
SRRT-208ENST00000469602 BRI3BPQ8WY22 251 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 PTPN18Q99952 460 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 CFHR5Q9BXR6 569 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 TRIM34Q9BYJ4 488 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 ARMT1Q9H993 441 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 MYH8P13535 1937 aa11.74□□□□□ -0.53
SRRT-208ENST00000469602 CCL15-CCL14A0A0B4J2E2 113 aa11.73□□□□□ -0.53
SRRT-208ENST00000469602 RNF113AO15541 343 aaKnown RBP11.73□□□□□ -0.53
SRRT-208ENST00000469602 TBC1D8O95759 1140 aa11.73□□□□□ -0.53
SRRT-208ENST00000469602 ZFYP08048 801 aaPredicted RBP11.73□□□□□ -0.53
SRRT-208ENST00000469602 CETPP11597 493 aa11.73□□□□□ -0.53
SRRT-208ENST00000469602 CCL15Q16663 113 aa11.73□□□□□ -0.53
SRRT-208ENST00000469602 LRRFIP1Q32MZ4 808 aaKnown RBP11.73□□□□□ -0.53
SRRT-208ENST00000469602 TTC6Q86TZ1 520 aa11.73□□□□□ -0.53
SRRT-208ENST00000469602 CHD1LQ86WJ1 897 aa11.73□□□□□ -0.53
SRRT-208ENST00000469602 CRACR2BQ8N4Y2 399 aaPredicted RBP11.73□□□□□ -0.53
SRRT-208ENST00000469602 SDR42E1Q8WUS8 393 aa11.73□□□□□ -0.53
SRRT-208ENST00000469602 PUS7LQ9H0K6 701 aaKnown RBP11.73□□□□□ -0.53
SRRT-208ENST00000469602 EHD4Q9H223 541 aa11.73□□□□□ -0.53
SRRT-208ENST00000469602 DNAJC18Q9H819 358 aa11.73□□□□□ -0.53
SRRT-208ENST00000469602 KCNH4Q9UQ05 1017 aa11.73□□□□□ -0.53
SRRT-208ENST00000469602 CAP2P40123 477 aa11.72□□□□□ -0.53
SRRT-208ENST00000469602 RRP1BQ14684 758 aaKnown RBP11.72□□□□□ -0.53
SRRT-208ENST00000469602 SLC4A8Q2Y0W8 1093 aa11.72□□□□□ -0.53
SRRT-208ENST00000469602 APPBP2Q92624 585 aa11.72□□□□□ -0.53
SRRT-208ENST00000469602 FSD1Q9BTV5 496 aa11.72□□□□□ -0.53
SRRT-208ENST00000469602 DCP1AQ9NPI6 582 aaPredicted RBP11.72□□□□□ -0.53
SRRT-208ENST00000469602 MCM9Q9NXL9 1143 aa11.72□□□□□ -0.53
SRRT-208ENST00000469602 SERPINB13Q9UIV8 391 aa11.72□□□□□ -0.53
SRRT-208ENST00000469602 ZHX2Q9Y6X8 837 aa11.72□□□□□ -0.53
SRRT-208ENST00000469602 CXCL11O14625 94 aa11.71□□□□□ -0.53
SRRT-208ENST00000469602 PRKAB2O43741 272 aa11.71□□□□□ -0.53
SRRT-208ENST00000469602 POLR3DP05423 398 aaPredicted RBP11.71□□□□□ -0.53
SRRT-208ENST00000469602 PLCD1P51178 756 aa11.71□□□□□ -0.53
SRRT-208ENST00000469602 NOM1Q5C9Z4 860 aaKnown RBP11.71□□□□□ -0.53
SRRT-208ENST00000469602 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
SRRT-208ENST00000469602 STRBPQ96SI9 672 aaKnown RBP11.71□□□□□ -0.53
SRRT-208ENST00000469602 R3HDMLQ9H3Y0 253 aa11.71□□□□□ -0.53
SRRT-208ENST00000469602 ZCCHC17Q9NP64 241 aaKnown RBP11.71□□□□□ -0.53
SRRT-208ENST00000469602 ATP8A2Q9NTI2 1148 aa11.71□□□□□ -0.53
SRRT-208ENST00000469602 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.71□□□□□ -0.53
SRRT-208ENST00000469602 AFG3L2Q9Y4W6 797 aa11.71□□□□□ -0.53
SRRT-208ENST00000469602 LOC285556D6RIA3 1793 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 BTBD19C9JJ37 291 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 ASNSP08243 561 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 CRHR2Q13324 411 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 MOGSQ13724 837 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 TATDN1Q6P1N9 297 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 PLEKHM2Q8IWE5 1019 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 TNS4Q8IZW8 715 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 FAM43AQ8N2R8 423 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 EVI5LQ96CN4 794 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 DDRGK1Q96HY6 314 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 OSBPL3Q9H4L5 887 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 SLC4A4Q9Y6R1 1079 aa11.7□□□□□ -0.54
SRRT-208ENST00000469602 A0A0G2JLL6 359 aaPredicted RBP11.69□□□□□ -0.54
SRRT-208ENST00000469602 TRIM75PA6NK02 468 aa11.69□□□□□ -0.54
SRRT-208ENST00000469602 GPR25O00155 361 aa11.69□□□□□ -0.54
SRRT-208ENST00000469602 GDF11O95390 407 aa11.69□□□□□ -0.54
SRRT-208ENST00000469602 GABPAQ06546 454 aa11.69□□□□□ -0.54
SRRT-208ENST00000469602 TAF1CQ15572 869 aaPredicted RBP11.69□□□□□ -0.54
SRRT-208ENST00000469602 PRRT2Q7Z6L0 340 aaPredicted RBP11.69□□□□□ -0.54
SRRT-208ENST00000469602 ANKRD23Q86SG2 305 aa11.69□□□□□ -0.54
SRRT-208ENST00000469602 CCDC84Q86UT8 332 aaPredicted RBP11.69□□□□□ -0.54
SRRT-208ENST00000469602 ZNF280CQ8ND82 737 aa11.69□□□□□ -0.54
SRRT-208ENST00000469602 ZNF296Q8WUU4 475 aaPredicted RBP11.69□□□□□ -0.54
SRRT-208ENST00000469602 TBC1D2Q9BYX2 928 aa11.69□□□□□ -0.54
SRRT-208ENST00000469602 GINM1Q9NU53 330 aa11.69□□□□□ -0.54
SRRT-208ENST00000469602 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms