RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 LGR6Q9HBX8 967 aa7.97□□□□□ -1.13
VPS8-219ENST00000469479 FAM53CQ9NYF3 392 aa7.97□□□□□ -1.13
VPS8-219ENST00000469479 PDE3AQ14432 1141 aa7.96□□□□□ -1.14
VPS8-219ENST00000469479 IFI16Q16666 785 aaKnown RBP7.96□□□□□ -1.14
VPS8-219ENST00000469479 GALNT12Q8IXK2 581 aa7.96□□□□□ -1.14
VPS8-219ENST00000469479 LRRN4CLQ8ND94 238 aa7.96□□□□□ -1.14
VPS8-219ENST00000469479 WDR18Q9BV38 432 aa7.96□□□□□ -1.14
VPS8-219ENST00000469479 ADAMTS6Q9UKP5 1117 aa7.96□□□□□ -1.14
VPS8-219ENST00000469479 SETD1BQ9UPS6 1966 aaKnown RBP7.96□□□□□ -1.14
VPS8-219ENST00000469479 RAPGEF6Q8TEU7 1601 aa7.96□□□□□ -1.14
VPS8-219ENST00000469479 NCOA1Q15788 1441 aa7.95□□□□□ -1.14
VPS8-219ENST00000469479 ARID3CA6NKF2 412 aa7.95□□□□□ -1.14
VPS8-219ENST00000469479 POLR3DP05423 398 aaPredicted RBP7.95□□□□□ -1.14
VPS8-219ENST00000469479 FAM87AP0C7U9 286 aa7.95□□□□□ -1.14
VPS8-219ENST00000469479 MESP2Q0VG99 397 aa7.95□□□□□ -1.14
VPS8-219ENST00000469479 AP3B2Q13367 1082 aa7.95□□□□□ -1.14
VPS8-219ENST00000469479 PIDD1Q9HB75 910 aa7.95□□□□□ -1.14
VPS8-219ENST00000469479 PPP1R9AQ9ULJ8 1098 aa7.95□□□□□ -1.14
VPS8-219ENST00000469479 TRAPPC8Q9Y2L5 1435 aa7.95□□□□□ -1.14
VPS8-219ENST00000469479 HECW1Q76N89 1606 aa7.94□□□□□ -1.14
VPS8-219ENST00000469479 ECEL1O95672 775 aa7.94□□□□□ -1.14
VPS8-219ENST00000469479 GJD3Q8N144 294 aa7.94□□□□□ -1.14
VPS8-219ENST00000469479 FAM181AQ8N9Y4 354 aa7.94□□□□□ -1.14
VPS8-219ENST00000469479 TOX2Q96NM4 488 aa7.94□□□□□ -1.14
VPS8-219ENST00000469479 ATXN3LQ9H3M9 355 aa7.94□□□□□ -1.14
VPS8-219ENST00000469479 SCAPERQ9BY12 1400 aa7.94□□□□□ -1.14
VPS8-219ENST00000469479 CNTLNQ9NXG0 1405 aa7.94□□□□□ -1.14
VPS8-219ENST00000469479 TMEM265A0A087WTH1 108 aa7.93□□□□□ -1.14
VPS8-219ENST00000469479 FZD6O60353 706 aa7.93□□□□□ -1.14
VPS8-219ENST00000469479 SLFN14P0C7P3 912 aa7.93□□□□□ -1.14
VPS8-219ENST00000469479 HNRNPUQ00839 825 aaKnown RBP eCLIP7.93□□□□□ -1.14
VPS8-219ENST00000469479 CDK5R2Q13319 367 aa7.93□□□□□ -1.14
VPS8-219ENST00000469479 AOC3Q16853 763 aa7.93□□□□□ -1.14
VPS8-219ENST00000469479 ANGEL2Q5VTE6 544 aaKnown RBP7.93□□□□□ -1.14
VPS8-219ENST00000469479 ARHGAP27Q6ZUM4 889 aa7.93□□□□□ -1.14
VPS8-219ENST00000469479 HRASLS5Q96KN8 279 aa7.93□□□□□ -1.14
VPS8-219ENST00000469479 NUP153P49790 1475 aaKnown RBP7.93□□□□□ -1.14
VPS8-219ENST00000469479 ZNF518AQ6AHZ1 1483 aa7.93□□□□□ -1.14
VPS8-219ENST00000469479 PRXQ9BXM0 1461 aa7.93□□□□□ -1.14
VPS8-219ENST00000469479 MED1Q15648 1581 aaPredicted RBP7.93□□□□□ -1.14
VPS8-219ENST00000469479 LRRC10BA6NIK2 292 aa7.92□□□□□ -1.14
VPS8-219ENST00000469479 CEBPAP49715 358 aaPredicted RBP7.92□□□□□ -1.14
VPS8-219ENST00000469479 SF3B2Q13435 895 aaKnown RBP7.92□□□□□ -1.14
VPS8-219ENST00000469479 MTMR3Q13615 1198 aa7.92□□□□□ -1.14
VPS8-219ENST00000469479 KIAA0319Q5VV43 1072 aa7.92□□□□□ -1.14
VPS8-219ENST00000469479 SLC23A3Q6PIS1 610 aa7.92□□□□□ -1.14
VPS8-219ENST00000469479 FLAD1Q8NFF5 587 aa7.92□□□□□ -1.14
VPS8-219ENST00000469479 ZSCAN18Q8TBC5 510 aaPredicted RBP7.92□□□□□ -1.14
VPS8-219ENST00000469479 ZNF576Q9H609 170 aa7.92□□□□□ -1.14
VPS8-219ENST00000469479 CRIM1Q9NZV1 1036 aa7.92□□□□□ -1.14
VPS8-219ENST00000469479 MTMR7Q9Y216 660 aa7.92□□□□□ -1.14
VPS8-219ENST00000469479 NPATQ14207 1427 aa7.92□□□□□ -1.14
VPS8-219ENST00000469479 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.92□□□□□ -1.14
VPS8-219ENST00000469479 REREQ9P2R6 1566 aa7.92□□□□□ -1.14
VPS8-219ENST00000469479 TMPRSS2O15393 492 aa7.91□□□□□ -1.14
VPS8-219ENST00000469479 ITPKAP23677 461 aa7.91□□□□□ -1.14
VPS8-219ENST00000469479 BUD31P41223 144 aaPredicted RBP7.91□□□□□ -1.14
VPS8-219ENST00000469479 SMYD4Q8IYR2 804 aaPredicted RBP7.91□□□□□ -1.14
VPS8-219ENST00000469479 KRTAP9-3Q9BYQ3 159 aa7.91□□□□□ -1.14
VPS8-219ENST00000469479 PLCH2O75038 1416 aa7.91□□□□□ -1.14
VPS8-219ENST00000469479 AGLP35573 1532 aa7.91□□□□□ -1.14
VPS8-219ENST00000469479 SAMD9Q5K651 1589 aa7.91□□□□□ -1.14
VPS8-219ENST00000469479 SIGLEC1Q9BZZ2 1709 aa7.91□□□□□ -1.14
VPS8-219ENST00000469479 PLA2R1Q13018 1463 aa7.9□□□□□ -1.14
VPS8-219ENST00000469479 TOM1O60784 492 aa7.9□□□□□ -1.14
VPS8-219ENST00000469479 NEFLP07196 543 aa7.9□□□□□ -1.14
VPS8-219ENST00000469479 CD96P40200 585 aa7.9□□□□□ -1.14
VPS8-219ENST00000469479 RAP1GAPP47736 663 aa7.9□□□□□ -1.14
VPS8-219ENST00000469479 PTPN12Q05209 780 aaKnown RBP7.9□□□□□ -1.14
VPS8-219ENST00000469479 EFCAB2Q5VUJ9 269 aa7.9□□□□□ -1.14
VPS8-219ENST00000469479 ZSWIM9Q86XI8 627 aa7.9□□□□□ -1.14
VPS8-219ENST00000469479 CEACAM5P06731 702 aa7.89□□□□□ -1.15
VPS8-219ENST00000469479 SSFA2P28290 1259 aa7.89□□□□□ -1.15
VPS8-219ENST00000469479 OXCT1P55809 520 aa7.89□□□□□ -1.15
VPS8-219ENST00000469479 ID3Q02535 119 aa7.89□□□□□ -1.15
VPS8-219ENST00000469479 FKBP4Q02790 459 aaKnown RBP eCLIP7.89□□□□□ -1.15
VPS8-219ENST00000469479 FANCD2OSQ96PS1 177 aa7.89□□□□□ -1.15
VPS8-219ENST00000469479 SNX11Q9Y5W9 270 aa7.89□□□□□ -1.15
VPS8-219ENST00000469479 LIG1P18858 919 aa7.88□□□□□ -1.15
VPS8-219ENST00000469479 CFPP27918 469 aa7.88□□□□□ -1.15
VPS8-219ENST00000469479 RPS26P11Q5JNZ5 115 aaPredicted RBP7.88□□□□□ -1.15
VPS8-219ENST00000469479 CILP2Q8IUL8 1156 aa7.88□□□□□ -1.15
VPS8-219ENST00000469479 PPP1R16BQ96T49 567 aa7.88□□□□□ -1.15
VPS8-219ENST00000469479 CCDC87Q9NVE4 849 aa7.88□□□□□ -1.15
VPS8-219ENST00000469479 PCOLCE2Q9UKZ9 415 aa7.88□□□□□ -1.15
VPS8-219ENST00000469479 CAMSAP1Q5T5Y3 1602 aa7.88□□□□□ -1.15
VPS8-219ENST00000469479 ZNF335Q9H4Z2 1342 aaPredicted RBP7.87□□□□□ -1.15
VPS8-219ENST00000469479 KCNMB1Q16558 191 aa7.87□□□□□ -1.15
VPS8-219ENST00000469479 SIAH1Q8IUQ4 282 aa7.87□□□□□ -1.15
VPS8-219ENST00000469479 DUSP23Q9BVJ7 150 aa7.87□□□□□ -1.15
VPS8-219ENST00000469479 CCDC86Q9H6F5 360 aaKnown RBP7.87□□□□□ -1.15
VPS8-219ENST00000469479 DISC1Q9NRI5 854 aa7.87□□□□□ -1.15
VPS8-219ENST00000469479 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.87□□□□□ -1.15
VPS8-219ENST00000469479 PLAGL2Q9UPG8 496 aa7.87□□□□□ -1.15
VPS8-219ENST00000469479 KDM5CP41229 1560 aa7.87□□□□□ -1.15
VPS8-219ENST00000469479 C3P01024 1663 aa7.86□□□□□ -1.15
VPS8-219ENST00000469479 RNGTTO60942 597 aaKnown RBP7.86□□□□□ -1.15
VPS8-219ENST00000469479 TSPAN15O95858 294 aa7.86□□□□□ -1.15
VPS8-219ENST00000469479 HSPA1LP34931 641 aa7.86□□□□□ -1.15
VPS8-219ENST00000469479 MLANAQ16655 118 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms