RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 COL15A1P39059 1388 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 SNUPNO95149 360 aaKnown RBP11.34□□□□□ -0.59
NUP50-214ENST00000469163 EIF5P55010 431 aaKnown RBP11.34□□□□□ -0.59
NUP50-214ENST00000469163 PTH1RQ03431 593 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 NAA25Q14CX7 972 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 CAVIN4Q5BKX8 364 aa11.34□□□□□ -0.59
NUP50-214ENST00000469163 FNBP4Q8N3X1 1017 aaPredicted RBP11.34□□□□□ -0.59
NUP50-214ENST00000469163 SKILP12757 684 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 CHRNDQ07001 517 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 R3HDM1Q15032 1099 aaKnown RBP11.33□□□□□ -0.6
NUP50-214ENST00000469163 HHATQ5VTY9 493 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 KAT2BQ92831 832 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 UFL1O94874 794 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 KLRK1P26718 216 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 FOXO4P98177 505 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 PICALMQ13492 652 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 VPS53Q5VIR6 699 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 ZSCAN29Q8IWY8 852 aaPredicted RBP11.33□□□□□ -0.6
NUP50-214ENST00000469163 MICAL1Q8TDZ2 1067 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 ESYT1Q9BSJ8 1104 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 INCENPQ9NQS7 918 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 PARP3Q9Y6F1 533 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 PCNTO95613 3336 aa11.33□□□□□ -0.6
NUP50-214ENST00000469163 A0A1B0GUA9 196 aa11.32□□□□□ -0.6
NUP50-214ENST00000469163 CAPN15O75808 1086 aa11.32□□□□□ -0.6
NUP50-214ENST00000469163 CPP00450 1065 aa11.32□□□□□ -0.6
NUP50-214ENST00000469163 SLC5A1P13866 664 aa11.32□□□□□ -0.6
NUP50-214ENST00000469163 NKX1-1Q15270 411 aaPredicted RBP11.32□□□□□ -0.6
NUP50-214ENST00000469163 ZNF396Q96N95 335 aaPredicted RBP11.32□□□□□ -0.6
NUP50-214ENST00000469163 BAG1Q99933 345 aaPredicted RBP11.32□□□□□ -0.6
NUP50-214ENST00000469163 ENO4A6NNW6 628 aa11.32□□□□□ -0.6
NUP50-214ENST00000469163 RPS8P62241 208 aaKnown RBP11.32□□□□□ -0.6
NUP50-214ENST00000469163 ZNF589Q86UQ0 364 aaPredicted RBP11.32□□□□□ -0.6
NUP50-214ENST00000469163 TACO1Q9BSH4 297 aaKnown RBP11.32□□□□□ -0.6
NUP50-214ENST00000469163 H7C1W4 665 aa11.32□□□□□ -0.6
NUP50-214ENST00000469163 PCCAP05165 728 aaPredicted RBP11.32□□□□□ -0.6
NUP50-214ENST00000469163 GNL2Q13823 731 aaKnown RBP11.32□□□□□ -0.6
NUP50-214ENST00000469163 TBC1D25Q3MII6 688 aa11.32□□□□□ -0.6
NUP50-214ENST00000469163 CCDC83Q8IWF9 413 aa11.32□□□□□ -0.6
NUP50-214ENST00000469163 NRBP1Q9UHY1 535 aa11.32□□□□□ -0.6
NUP50-214ENST00000469163 DLG5Q8TDM6 1919 aa11.32□□□□□ -0.6
NUP50-214ENST00000469163 CAMTA2O94983 1202 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 PDCD2Q16342 344 aaPredicted RBP11.31□□□□□ -0.6
NUP50-214ENST00000469163 BARGINQ6ZT62 677 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 NUP133Q8WUM0 1156 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 AKAP2Q9Y2D5 859 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 EIF3JO75822 258 aaKnown RBP11.31□□□□□ -0.6
NUP50-214ENST00000469163 FAM163BP0C2L3 166 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 RANBP1P43487 201 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 USP4Q13107 963 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 DZIP1Q86YF9 867 aaKnown RBP11.31□□□□□ -0.6
NUP50-214ENST00000469163 STK32BQ9NY57 414 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 MKRN1Q9UHC7 482 aaKnown RBP11.31□□□□□ -0.6
NUP50-214ENST00000469163 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 AP5Z1O43299 807 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 SCNN1DP51172 638 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 RALYLQ86SE5 291 aaKnown RBP11.31□□□□□ -0.6
NUP50-214ENST00000469163 TRIM5Q9C035 493 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 ARMT1Q9H993 441 aa11.31□□□□□ -0.6
NUP50-214ENST00000469163 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
NUP50-214ENST00000469163 RBM8AQ9Y5S9 174 aaKnown RBP11.31□□□□□ -0.6
NUP50-214ENST00000469163 CYP7A1P22680 504 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 CRYMQ14894 314 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 ISM2Q6H9L7 571 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 MSL3Q8N5Y2 521 aaKnown RBP11.3□□□□□ -0.6
NUP50-214ENST00000469163 SDR42E1Q8WUS8 393 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 DBNDD1Q9H9R9 158 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 PSD3Q9NYI0 1048 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 ALS2Q96Q42 1657 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 RGS12O14924 1447 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 GADD45BO75293 160 aaPredicted RBP11.3□□□□□ -0.6
NUP50-214ENST00000469163 RPS6KA4O75676 772 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 CCDC102BQ68D86 513 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 STAG1Q8WVM7 1258 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 EVI5LQ96CN4 794 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 MXD3Q9BW11 206 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 USP27XA6NNY8 438 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
NUP50-214ENST00000469163 KCNV1Q6PIU1 500 aa11.3□□□□□ -0.6
NUP50-214ENST00000469163 SAP30BPQ9UHR5 308 aaKnown RBP11.3□□□□□ -0.6
NUP50-214ENST00000469163 ZRANB2O95218 330 aaKnown RBP eCLIP11.29□□□□□ -0.6
NUP50-214ENST00000469163 ZSCAN25Q6NSZ9 544 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 CEP57Q86XR8 500 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 C3orf20Q8ND61 904 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 LRRN4CLQ8ND94 238 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 CENPHQ9H3R5 247 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 CD248Q9HCU0 757 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 AATFQ9NY61 560 aaKnown RBP eCLIP11.29□□□□□ -0.6
NUP50-214ENST00000469163 BCL9O00512 1426 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 USP54Q70EL1 1684 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 GRIK3Q13003 919 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 CLIP2Q9UDT6 1046 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 KIF1AQ12756 1690 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 RANBP6O60518 1105 aaKnown RBP11.29□□□□□ -0.6
NUP50-214ENST00000469163 SASH3O75995 380 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 BAG6P46379 1132 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 MCM2P49736 904 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 ZNF827Q17R98 1081 aa11.29□□□□□ -0.6
NUP50-214ENST00000469163 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms