RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 MARCKSP29966 332 aaPredicted RBP16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 CTSWP56202 376 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 TRIM29Q14134 588 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 NFIXQ14938 502 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 TTLL11Q8NHH1 800 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 PIH1D3Q9NQM4 214 aaKnown RBP16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 ZNF215Q9UL58 517 aaPredicted RBP16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 CCP110O43303 1012 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 MYO1BO43795 1136 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 SLU7O95391 586 aaKnown RBP16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 FANCCQ00597 558 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 PTPAQ15257 358 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 SLC15A2Q16348 729 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 E4F1Q66K89 784 aaPredicted RBP16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 NBPF5PQ86XG9 351 aaPredicted RBP16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 VGLL2Q8N8G2 317 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 PPP1R13BQ96KQ4 1090 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 GREM2Q9H772 168 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 STK36Q9NRP7 1315 aa16.36■□□□□ 0.21
SMARCD3-205ENST00000469154 PNPLA7Q6ZV29 1317 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 ZNF532Q9HCE3 1301 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 ZBTB43O43298 467 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 PDE8AO60658 829 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 APPP05067 770 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 ARID4AP29374 1257 aaPredicted RBP16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 NAA30Q147X3 362 aaPredicted RBP16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 ALX1Q15699 326 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 ERFEQ4G0M1 354 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 RESP18Q5W5W9 173 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 CCDC125Q86Z20 511 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 CUTAO60888 179 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 IDH1O75874 414 aaKnown RBP16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 PDE6AP16499 860 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 IARSP41252 1262 aaKnown RBP16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 AIFM3Q96NN9 605 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 STK32BQ9NY57 414 aa16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 DDX41Q9UJV9 622 aaKnown RBP16.35■□□□□ 0.21
SMARCD3-205ENST00000469154 GOLGA8AA7E2F4 631 aa16.34■□□□□ 0.21
SMARCD3-205ENST00000469154 B4E1Z4 1266 aa16.34■□□□□ 0.21
SMARCD3-205ENST00000469154 MYL5Q02045 173 aa16.34■□□□□ 0.21
SMARCD3-205ENST00000469154 SHC4Q6S5L8 630 aa16.34■□□□□ 0.21
SMARCD3-205ENST00000469154 NFXL1Q6ZNB6 911 aa16.34■□□□□ 0.21
SMARCD3-205ENST00000469154 CCDC24Q8N4L8 307 aa16.34■□□□□ 0.21
SMARCD3-205ENST00000469154 FLAD1Q8NFF5 587 aa16.34■□□□□ 0.21
SMARCD3-205ENST00000469154 MAP3K14Q99558 947 aa16.34■□□□□ 0.21
SMARCD3-205ENST00000469154 NPHP1O15259 732 aa16.34■□□□□ 0.21
SMARCD3-205ENST00000469154 CDC27P30260 824 aa16.34■□□□□ 0.21
SMARCD3-205ENST00000469154 MICU3Q86XE3 530 aa16.34■□□□□ 0.21
SMARCD3-205ENST00000469154 PDE8BO95263 885 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 LMOD1P29536 600 aaPredicted RBP16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 OLFM4Q6UX06 510 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 TPTE2Q6XPS3 522 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 IGDCC4Q8TDY8 1250 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 WASF1Q92558 559 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 NYXQ9GZU5 481 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 L2HGDHQ9H9P8 463 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 LY9Q9HBG7 655 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 DENND2AQ9ULE3 1009 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 NID2Q14112 1375 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 TCRBV5S4A2TA0A5A2 114 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 LIFRP42702 1097 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 NTRK3Q16288 839 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 TMEM67Q5HYA8 995 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 CCDC102BQ68D86 513 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 PHKBQ93100 1093 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 AIDAQ96BJ3 306 aa16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.33■□□□□ 0.2
SMARCD3-205ENST00000469154 RXRAP19793 462 aa16.32■□□□□ 0.2
SMARCD3-205ENST00000469154 ELOA2Q8IYF1 753 aaPredicted RBP16.32■□□□□ 0.2
SMARCD3-205ENST00000469154 STRBPQ96SI9 672 aaKnown RBP16.32■□□□□ 0.2
SMARCD3-205ENST00000469154 HSD3B7Q9H2F3 369 aa16.32■□□□□ 0.2
SMARCD3-205ENST00000469154 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
SMARCD3-205ENST00000469154 MORC2Q9Y6X9 1032 aaPredicted RBP16.32■□□□□ 0.2
SMARCD3-205ENST00000469154 PHKA1P46020 1223 aa16.31■□□□□ 0.2
SMARCD3-205ENST00000469154 SSRP1Q08945 709 aaKnown RBP16.31■□□□□ 0.2
SMARCD3-205ENST00000469154 CNNM2Q9H8M5 875 aa16.31■□□□□ 0.2
SMARCD3-205ENST00000469154 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
SMARCD3-205ENST00000469154 UBASH3AP57075 661 aa16.31■□□□□ 0.2
SMARCD3-205ENST00000469154 PNOCQ13519 176 aa16.31■□□□□ 0.2
SMARCD3-205ENST00000469154 PUM3Q15397 648 aaKnown RBP16.31■□□□□ 0.2
SMARCD3-205ENST00000469154 KRBA2Q6ZNG9 492 aa16.31■□□□□ 0.2
SMARCD3-205ENST00000469154 NKX2-3Q8TAU0 364 aa16.31■□□□□ 0.2
SMARCD3-205ENST00000469154 FMNL1O95466 1100 aaPredicted RBP16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 SERPINC1P01008 464 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 TM4SF1P30408 202 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 GABPB1Q06547 395 aaPredicted RBP16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 ISM2Q6H9L7 571 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 LPIN2Q92539 896 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 SENP2Q9HC62 589 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 FAM217BQ9NTX9 383 aaPredicted RBP16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 PODXL2Q9NZ53 605 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 HOOK1Q9UJC3 728 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 MROH5Q6ZUA9 1318 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 PATL2C9JE40 543 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 ATP1A3P13637 1013 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 ELF2Q15723 593 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 MSL1Q68DK7 614 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms