RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 FAM163AQ96GL9 167 aaPredicted RBP10.91□□□□□ -0.66
SMC1A-205ENST00000469129 SCAND2PQ9GZW5 306 aaPredicted RBP10.91□□□□□ -0.66
SMC1A-205ENST00000469129 MCM9Q9NXL9 1143 aa10.91□□□□□ -0.66
SMC1A-205ENST00000469129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.91□□□□□ -0.66
SMC1A-205ENST00000469129 TNKSO95271 1327 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 GREB1LQ9C091 1923 aaPredicted RBP10.9□□□□□ -0.66
SMC1A-205ENST00000469129 MYH4Q9Y623 1939 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 FER1L6Q2WGJ9 1857 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 GOLGA6L3A6NEY3 463 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 RIMBP2O15034 1052 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 FIBPO43427 364 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 UBE2HP62256 183 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 FKBP1AP62942 108 aaKnown RBP10.9□□□□□ -0.66
SMC1A-205ENST00000469129 RESTQ13127 1097 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 DIXDC1Q155Q3 683 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 RTN1Q16799 776 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 PODNQ7Z5L7 613 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 SLC51AQ86UW1 340 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 TEX11Q8IYF3 940 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 TRIM22Q8IYM9 498 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 SH3RF3Q8TEJ3 882 aaPredicted RBP10.9□□□□□ -0.66
SMC1A-205ENST00000469129 C8orf76Q96K31 380 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 SYT17Q9BSW7 474 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 GPHNQ9NQX3 736 aaPredicted RBP10.9□□□□□ -0.66
SMC1A-205ENST00000469129 ORC3Q9UBD5 711 aaPredicted RBP10.9□□□□□ -0.66
SMC1A-205ENST00000469129 CNPY2Q9Y2B0 182 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 SNED1Q8TER0 1413 aa10.9□□□□□ -0.66
SMC1A-205ENST00000469129 ARFGEF1Q9Y6D6 1849 aa10.89□□□□□ -0.67
SMC1A-205ENST00000469129 RANBP6O60518 1105 aaKnown RBP10.89□□□□□ -0.67
SMC1A-205ENST00000469129 DDAH1O94760 285 aa10.89□□□□□ -0.67
SMC1A-205ENST00000469129 IARSP41252 1262 aaKnown RBP10.89□□□□□ -0.67
SMC1A-205ENST00000469129 GTF2IP78347 998 aa10.89□□□□□ -0.67
SMC1A-205ENST00000469129 IFIT1BQ5T764 474 aaKnown RBP10.89□□□□□ -0.67
SMC1A-205ENST00000469129 CAVIN1Q6NZI2 390 aaKnown RBP10.89□□□□□ -0.67
SMC1A-205ENST00000469129 BRAPQ7Z569 592 aa10.89□□□□□ -0.67
SMC1A-205ENST00000469129 USP48Q86UV5 1035 aa10.89□□□□□ -0.67
SMC1A-205ENST00000469129 FERMT3Q86UX7 667 aa10.89□□□□□ -0.67
SMC1A-205ENST00000469129 ZNF654Q8IZM8 581 aa10.89□□□□□ -0.67
SMC1A-205ENST00000469129 FBXW7Q969H0 707 aa10.89□□□□□ -0.67
SMC1A-205ENST00000469129 ZNF396Q96N95 335 aaPredicted RBP10.89□□□□□ -0.67
SMC1A-205ENST00000469129 ZSCAN10Q96SZ4 725 aaPredicted RBP10.89□□□□□ -0.67
SMC1A-205ENST00000469129 GZF1Q9H116 711 aaPredicted RBP10.89□□□□□ -0.67
SMC1A-205ENST00000469129 RBM28Q9NW13 759 aaKnown RBP10.89□□□□□ -0.67
SMC1A-205ENST00000469129 CFAP45Q9UL16 551 aa10.89□□□□□ -0.67
SMC1A-205ENST00000469129 SIPA1L1O43166 1804 aa10.88□□□□□ -0.67
SMC1A-205ENST00000469129 POLR3DP05423 398 aaPredicted RBP10.88□□□□□ -0.67
SMC1A-205ENST00000469129 IFNAR1P17181 557 aa10.88□□□□□ -0.67
SMC1A-205ENST00000469129 DNM1Q05193 864 aaKnown RBP10.88□□□□□ -0.67
SMC1A-205ENST00000469129 SSRP1Q08945 709 aaKnown RBP10.88□□□□□ -0.67
SMC1A-205ENST00000469129 TRIM29Q14134 588 aa10.88□□□□□ -0.67
SMC1A-205ENST00000469129 SEC23AQ15436 765 aa10.88□□□□□ -0.67
SMC1A-205ENST00000469129 FOXD4L6Q3SYB3 417 aaPredicted RBP10.88□□□□□ -0.67
SMC1A-205ENST00000469129 SOGA3Q5TF21 947 aa10.88□□□□□ -0.67
SMC1A-205ENST00000469129 C12orf60Q5U649 245 aa10.88□□□□□ -0.67
SMC1A-205ENST00000469129 FOXD4L3Q6VB84 417 aaPredicted RBP10.88□□□□□ -0.67
SMC1A-205ENST00000469129 CATIPQ7Z7H3 387 aa10.88□□□□□ -0.67
SMC1A-205ENST00000469129 GPT2Q8TD30 523 aa10.88□□□□□ -0.67
SMC1A-205ENST00000469129 SPATA32Q96LK8 384 aa10.88□□□□□ -0.67
SMC1A-205ENST00000469129 MKRN1Q9UHC7 482 aaKnown RBP10.88□□□□□ -0.67
SMC1A-205ENST00000469129 TACC3Q9Y6A5 838 aa10.88□□□□□ -0.67
SMC1A-205ENST00000469129 FLT1P17948 1338 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 CYP2D7A0A087X1C5 515 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 DCAF8L1A6NGE4 600 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 TSPY2A6NKD2 308 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 FMNL1O95466 1100 aaPredicted RBP10.87□□□□□ -0.67
SMC1A-205ENST00000469129 ZNF445P59923 1031 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 GRIK5Q16478 980 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 CCDC93Q567U6 631 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 STRIP1Q5VSL9 837 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 HHIPL2Q6UWX4 724 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 STK11IPQ8N1F8 1099 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 ENAHQ8N8S7 591 aaPredicted RBP10.87□□□□□ -0.67
SMC1A-205ENST00000469129 TGFBRAP1Q8WUH2 860 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 TEKT1Q969V4 418 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 ZKSCAN3Q9BRR0 538 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 TAOK2Q9UL54 1235 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 TTF2Q9UNY4 1162 aaKnown RBP10.87□□□□□ -0.67
SMC1A-205ENST00000469129 DAGLAQ9Y4D2 1042 aa10.87□□□□□ -0.67
SMC1A-205ENST00000469129 FSD2A1L4K1 749 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 GOLGA6L4A6NEF3 574 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 ECE2O60344 883 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 LETM1O95202 739 aaPredicted RBP10.86□□□□□ -0.67
SMC1A-205ENST00000469129 DEXIO95424 95 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 USP17L8P0C7I0 530 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 FDPSP14324 419 aaKnown RBP10.86□□□□□ -0.67
SMC1A-205ENST00000469129 CDC27P30260 824 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 CHRNA5P30532 468 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 MRE11P49959 708 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 HDLBPQ00341 1268 aaKnown RBP10.86□□□□□ -0.67
SMC1A-205ENST00000469129 KIAA2012Q0VF49 1180 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 ZSCAN23Q3MJ62 389 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 RAB11FIP4Q86YS3 637 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 MAPKAPK5Q8IW41 473 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 RTKN2Q8IZC4 609 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 FBXO18Q8NFZ0 1043 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 CTCFLQ8NI51 663 aaPredicted RBP10.86□□□□□ -0.67
SMC1A-205ENST00000469129 CHAMP1Q96JM3 812 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 ALG1Q9BT22 464 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 MKNK2Q9HBH9 465 aa10.86□□□□□ -0.67
SMC1A-205ENST00000469129 GDPD2Q9HCC8 539 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms