RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 CYP2E1P05181 493 aaPredicted RBP17.14■□□□□ 0.33
CCHCR1-211ENST00000467553 RHBDL3P58872 404 aa17.14■□□□□ 0.33
CCHCR1-211ENST00000467553 SH3BP5LQ7L8J4 393 aa17.14■□□□□ 0.33
CCHCR1-211ENST00000467553 NOL10Q9BSC4 688 aaKnown RBP17.14■□□□□ 0.33
CCHCR1-211ENST00000467553 OSBPL5Q9H0X9 879 aaPredicted RBP17.14■□□□□ 0.33
CCHCR1-211ENST00000467553 SRRDQ9UH36 339 aa17.14■□□□□ 0.33
CCHCR1-211ENST00000467553 PCDHB15Q9Y5E8 787 aa17.14■□□□□ 0.33
CCHCR1-211ENST00000467553 DDTLA6NHG4 134 aaPredicted RBP17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 SMARCA5O60264 1052 aaPredicted RBP17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 PLCG2P16885 1265 aa17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 CAPN2P17655 700 aa17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 PSMC4P43686 418 aa17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 PICALMQ13492 652 aa17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 SLC4A8Q2Y0W8 1093 aa17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 GPAT2Q6NUI2 795 aa17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 ZNF384Q8TF68 577 aa17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 DDX4Q9NQI0 724 aaKnown RBP17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 CPA4Q9UI42 421 aa17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 NDUFB9Q9Y6M9 179 aa17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 DOCK1Q14185 1865 aa17.13■□□□□ 0.33
CCHCR1-211ENST00000467553 FMNL1O95466 1100 aaPredicted RBP17.12■□□□□ 0.33
CCHCR1-211ENST00000467553 BAG3O95817 575 aa17.12■□□□□ 0.33
CCHCR1-211ENST00000467553 BCRP11274 1271 aa17.12■□□□□ 0.33
CCHCR1-211ENST00000467553 EN2P19622 333 aaPredicted RBP17.12■□□□□ 0.33
CCHCR1-211ENST00000467553 FCGRTP55899 365 aa17.12■□□□□ 0.33
CCHCR1-211ENST00000467553 LRRCC1Q9C099 1032 aa17.12■□□□□ 0.33
CCHCR1-211ENST00000467553 ARHGAP39Q9C0H5 1083 aa17.12■□□□□ 0.33
CCHCR1-211ENST00000467553 DHX36Q9H2U1 1008 aaKnown RBP17.12■□□□□ 0.33
CCHCR1-211ENST00000467553 DCTPP1Q9H773 170 aa17.12■□□□□ 0.33
CCHCR1-211ENST00000467553 NAA16Q6N069 864 aaPredicted RBP17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 TMED8Q6PL24 325 aaPredicted RBP17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 NKX2-3Q8TAU0 364 aa17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 RAET1EQ8TD07 263 aa17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 TRIM47Q96LD4 638 aa17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 PIH1D3Q9NQM4 214 aaKnown RBP17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 HERC5Q9UII4 1024 aaKnown RBP17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 PHIPQ8WWQ0 1821 aa17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 MYO5AQ9Y4I1 1855 aaKnown RBP17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 PTPRFP10586 1907 aa17.11■□□□□ 0.33
CCHCR1-211ENST00000467553 MGAMO43451 1857 aa17.1■□□□□ 0.33
CCHCR1-211ENST00000467553 OSBPP22059 807 aa17.1■□□□□ 0.33
CCHCR1-211ENST00000467553 PPP4CP60510 307 aa17.1■□□□□ 0.33
CCHCR1-211ENST00000467553 CERS3Q8IU89 383 aa17.1■□□□□ 0.33
CCHCR1-211ENST00000467553 PROCA1Q8NCQ7 364 aaPredicted RBP17.1■□□□□ 0.33
CCHCR1-211ENST00000467553 ANTXR1Q9H6X2 564 aa17.1■□□□□ 0.33
CCHCR1-211ENST00000467553 PI4KBQ9UBF8 816 aa17.1■□□□□ 0.33
CCHCR1-211ENST00000467553 PNMA3Q9UL41 463 aa17.1■□□□□ 0.33
CCHCR1-211ENST00000467553 IDH1O75874 414 aaKnown RBP17.09■□□□□ 0.33
CCHCR1-211ENST00000467553 GRK4P32298 578 aa17.09■□□□□ 0.33
CCHCR1-211ENST00000467553 PABPC4Q13310 644 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCHCR1-211ENST00000467553 GADL1Q6ZQY3 521 aa17.09■□□□□ 0.33
CCHCR1-211ENST00000467553 TEX11Q8IYF3 940 aa17.09■□□□□ 0.33
CCHCR1-211ENST00000467553 GINM1Q9NU53 330 aa17.09■□□□□ 0.33
CCHCR1-211ENST00000467553 AGTPBP1Q9UPW5 1226 aa17.09■□□□□ 0.33
CCHCR1-211ENST00000467553 MYPNQ86TC9 1320 aa17.09■□□□□ 0.33
CCHCR1-211ENST00000467553 UBXN2AP68543 259 aa17.08■□□□□ 0.32
CCHCR1-211ENST00000467553 SLAIN1Q8ND83 568 aa17.08■□□□□ 0.32
CCHCR1-211ENST00000467553 SH3TC2Q8TF17 1288 aa17.08■□□□□ 0.32
CCHCR1-211ENST00000467553 DNAJC2Q99543 621 aaKnown RBP17.08■□□□□ 0.32
CCHCR1-211ENST00000467553 ZSWIM8A7E2V4 1837 aa17.07■□□□□ 0.32
CCHCR1-211ENST00000467553 MAST2Q6P0Q8 1798 aa17.07■□□□□ 0.32
CCHCR1-211ENST00000467553 CYP2C8P10632 490 aa17.07■□□□□ 0.32
CCHCR1-211ENST00000467553 CYP7A1P22680 504 aa17.07■□□□□ 0.32
CCHCR1-211ENST00000467553 CTGFP29279 349 aa17.07■□□□□ 0.32
CCHCR1-211ENST00000467553 CAP2P40123 477 aa17.07■□□□□ 0.32
CCHCR1-211ENST00000467553 ZNF280CQ8ND82 737 aa17.07■□□□□ 0.32
CCHCR1-211ENST00000467553 SMCR8Q8TEV9 937 aaPredicted RBP17.07■□□□□ 0.32
CCHCR1-211ENST00000467553 BOLA2Q9H3K6 86 aa17.07■□□□□ 0.32
CCHCR1-211ENST00000467553 AS3MTQ9HBK9 375 aa17.07■□□□□ 0.32
CCHCR1-211ENST00000467553 AATFQ9NY61 560 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCHCR1-211ENST00000467553 TRIM75PA6NK02 468 aa17.06■□□□□ 0.32
CCHCR1-211ENST00000467553 USP17L5A8MUK1 530 aa17.06■□□□□ 0.32
CCHCR1-211ENST00000467553 MAP3K12Q12852 859 aa17.06■□□□□ 0.32
CCHCR1-211ENST00000467553 TTF1Q15361 905 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-211ENST00000467553 METTL16Q86W50 562 aaKnown RBP17.06■□□□□ 0.32
CCHCR1-211ENST00000467553 FOXP4Q8IVH2 680 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-211ENST00000467553 MAGEB6Q8N7X4 407 aa17.06■□□□□ 0.32
CCHCR1-211ENST00000467553 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCHCR1-211ENST00000467553 ATAD5Q96QE3 1844 aa17.05■□□□□ 0.32
CCHCR1-211ENST00000467553 GOLIM4O00461 696 aa17.05■□□□□ 0.32
CCHCR1-211ENST00000467553 GJB1P08034 283 aa17.05■□□□□ 0.32
CCHCR1-211ENST00000467553 GCLCP48506 637 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-211ENST00000467553 IRF5Q13568 498 aa17.05■□□□□ 0.32
CCHCR1-211ENST00000467553 SH3D19Q5HYK7 790 aa17.05■□□□□ 0.32
CCHCR1-211ENST00000467553 ADGRA1Q86SQ6 560 aa17.05■□□□□ 0.32
CCHCR1-211ENST00000467553 EXOC6Q8TAG9 804 aa17.05■□□□□ 0.32
CCHCR1-211ENST00000467553 PXYLP1Q8TE99 480 aa17.05■□□□□ 0.32
CCHCR1-211ENST00000467553 SH3RF3Q8TEJ3 882 aaPredicted RBP17.05■□□□□ 0.32
CCHCR1-211ENST00000467553 FOCADQ5VW36 1801 aa17.05■□□□□ 0.32
CCHCR1-211ENST00000467553 ASNSP08243 561 aa17.04■□□□□ 0.32
CCHCR1-211ENST00000467553 ATP5JP18859 108 aa17.04■□□□□ 0.32
CCHCR1-211ENST00000467553 GJA8P48165 433 aa17.04■□□□□ 0.32
CCHCR1-211ENST00000467553 DYNLL1P63167 89 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-211ENST00000467553 PRKCZQ05513 592 aa17.04■□□□□ 0.32
CCHCR1-211ENST00000467553 FAM110CQ1W6H9 321 aa17.04■□□□□ 0.32
CCHCR1-211ENST00000467553 EDC3Q96F86 508 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-211ENST00000467553 WDR18Q9BV38 432 aa17.04■□□□□ 0.32
CCHCR1-211ENST00000467553 LOC285556D6RIA3 1793 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms