RNA–Protein interactions for RNA: ENST00000466982.1

SFXN3-204, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-204ENST00000466982 TRMT44Q8IYL2 757 aaKnown RBP12.54□□□□□ -0.4
SFXN3-204ENST00000466982 CCDC97Q96F63 343 aaPredicted RBP12.54□□□□□ -0.4
SFXN3-204ENST00000466982 SUCLG2Q96I99 432 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 CDC5LQ99459 802 aaKnown RBP12.54□□□□□ -0.4
SFXN3-204ENST00000466982 FAM107BQ9H098 131 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.54□□□□□ -0.4
SFXN3-204ENST00000466982 AMOTL2Q9Y2J4 779 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 MAP3K2Q9Y2U5 619 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 ZNF609O15014 1411 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 ITSN1Q15811 1721 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 N4BP2Q86UW6 1770 aaPredicted RBP12.54□□□□□ -0.4
SFXN3-204ENST00000466982 SYKP43405 635 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 SLC5A9Q2M3M2 681 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 SPECC1LQ69YQ0 1117 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 CEP112Q8N8E3 955 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 AFAP1L1Q8TED9 768 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 ACEP12821 1306 aa12.54□□□□□ -0.4
SFXN3-204ENST00000466982 MON2Q7Z3U7 1717 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 AP1G2O75843 785 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 PRPF6O94906 941 aaKnown RBP12.53□□□□□ -0.4
SFXN3-204ENST00000466982 CCDC175P0C221 793 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 CMA1P23946 247 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 IGSF22Q8N9C0 903 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 POLR3EQ9NVU0 708 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 U3KPZ7 1027 aaPredicted RBP12.53□□□□□ -0.4
SFXN3-204ENST00000466982 LMTK3Q96Q04 1460 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 MAGEA8P43361 318 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 FMR1Q06787 632 aaKnown RBP eCLIP12.53□□□□□ -0.4
SFXN3-204ENST00000466982 DDR1Q08345 913 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 RBBP5Q15291 538 aaKnown RBP12.53□□□□□ -0.4
SFXN3-204ENST00000466982 PROSER3Q2NL68 480 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 DDX46Q7L014 1031 aaKnown RBP12.53□□□□□ -0.4
SFXN3-204ENST00000466982 SLC35F6Q8N357 371 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 ZNF232Q9UNY5 417 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 PCDHA5Q9Y5H7 936 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 ADGRG1Q9Y653 693 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 KDRP35968 1356 aa12.53□□□□□ -0.4
SFXN3-204ENST00000466982 SNUPNO95149 360 aaKnown RBP12.52□□□□□ -0.4
SFXN3-204ENST00000466982 YEATS4O95619 227 aa12.52□□□□□ -0.4
SFXN3-204ENST00000466982 NF2P35240 595 aa12.52□□□□□ -0.4
SFXN3-204ENST00000466982 EXOSC10Q01780 885 aaKnown RBP12.52□□□□□ -0.4
SFXN3-204ENST00000466982 PDCD2Q16342 344 aaPredicted RBP12.52□□□□□ -0.4
SFXN3-204ENST00000466982 ZNF827Q17R98 1081 aa12.52□□□□□ -0.4
SFXN3-204ENST00000466982 ANO1Q5XXA6 986 aa12.52□□□□□ -0.4
SFXN3-204ENST00000466982 NCAPH2Q6IBW4 605 aa12.52□□□□□ -0.4
SFXN3-204ENST00000466982 SHC4Q6S5L8 630 aa12.52□□□□□ -0.4
SFXN3-204ENST00000466982 METTL16Q86W50 562 aaKnown RBP12.52□□□□□ -0.4
SFXN3-204ENST00000466982 MICAL1Q8TDZ2 1067 aa12.52□□□□□ -0.4
SFXN3-204ENST00000466982 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.4
SFXN3-204ENST00000466982 C8orf76Q96K31 380 aa12.52□□□□□ -0.4
SFXN3-204ENST00000466982 C19orf44Q9H6X5 657 aa12.52□□□□□ -0.4
SFXN3-204ENST00000466982 IGSF1Q8N6C5 1336 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 ZMYND10O75800 440 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 ECEL1O95672 775 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 POLD1P28340 1107 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 AMPHP49418 695 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 MRPL12P52815 198 aaKnown RBP12.52□□□□□ -0.41
SFXN3-204ENST00000466982 LONRF3Q496Y0 759 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 SYNE3Q6ZMZ3 975 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 MSL3Q8N5Y2 521 aaKnown RBP12.52□□□□□ -0.41
SFXN3-204ENST00000466982 DRAXINQ8NBI3 349 aaPredicted RBP12.52□□□□□ -0.41
SFXN3-204ENST00000466982 NFE2L3Q9Y4A8 694 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 OVOS2A0A0J9YW53 1432 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 OVOS2Q6IE36 1432 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 TEX33O43247 280 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 KIF5CO60282 957 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 SPECC1Q5M775 1068 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 OLFM4Q6UX06 510 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 USHBP1Q8N6Y0 703 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 SAMSN1Q9NSI8 373 aaKnown RBP12.52□□□□□ -0.41
SFXN3-204ENST00000466982 FAM169AQ9Y6X4 670 aa12.52□□□□□ -0.41
SFXN3-204ENST00000466982 PTPRUQ92729 1446 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 TMCO5BA8MYB1 307 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 KCNA4P22459 653 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 EIF4A1P60842 406 aaKnown RBP12.51□□□□□ -0.41
SFXN3-204ENST00000466982 RPUSD2Q8IZ73 545 aaKnown RBP12.51□□□□□ -0.41
SFXN3-204ENST00000466982 AIFM3Q96NN9 605 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 HINFPQ9BQA5 517 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 KAT14Q9H8E8 782 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 LGR6Q9HBX8 967 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 DBNLQ9UJU6 430 aaKnown RBP12.51□□□□□ -0.41
SFXN3-204ENST00000466982 CTAGE15A4D2H0 777 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 CTAGE8P0CG41 777 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 KCNA6P17658 529 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 CD151P48509 253 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 AKAP17AQ02040 695 aaKnown RBP12.51□□□□□ -0.41
SFXN3-204ENST00000466982 MCMDC2Q4G0Z9 681 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 CTAGE6Q86UF2 777 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 CTAGE4Q8IX94 777 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 ACRBPQ8NEB7 543 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 RBM33Q96EV2 1170 aaKnown RBP12.51□□□□□ -0.41
SFXN3-204ENST00000466982 MED15Q96RN5 788 aa12.51□□□□□ -0.41
SFXN3-204ENST00000466982 CDHR2Q9BYE9 1310 aa12.5□□□□□ -0.41
SFXN3-204ENST00000466982 E7EWF7 191 aa12.5□□□□□ -0.41
SFXN3-204ENST00000466982 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
SFXN3-204ENST00000466982 NFXL1Q6ZNB6 911 aa12.5□□□□□ -0.41
SFXN3-204ENST00000466982 ANKRD18AQ8IVF6 992 aa12.5□□□□□ -0.41
SFXN3-204ENST00000466982 GSPT2Q8IYD1 628 aaKnown RBP12.5□□□□□ -0.41
SFXN3-204ENST00000466982 ROBO2Q9HCK4 1378 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms