RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 TRAF5O00463 557 aa17.5■□□□□ 0.39
HLA-F-223ENST00000465459 PCP11498 1178 aaKnown RBP17.5■□□□□ 0.39
HLA-F-223ENST00000465459 NT5C2P49902 561 aa17.5■□□□□ 0.39
HLA-F-223ENST00000465459 GABPAQ06546 454 aa17.5■□□□□ 0.39
HLA-F-223ENST00000465459 PPARAQ07869 468 aa17.5■□□□□ 0.39
HLA-F-223ENST00000465459 IMMTQ16891 758 aaKnown RBP17.5■□□□□ 0.39
HLA-F-223ENST00000465459 PRAMEF18Q5VWM3 479 aa17.5■□□□□ 0.39
HLA-F-223ENST00000465459 CDAN1Q8IWY9 1227 aa17.5■□□□□ 0.39
HLA-F-223ENST00000465459 CRACR2BQ8N4Y2 399 aaPredicted RBP17.5■□□□□ 0.39
HLA-F-223ENST00000465459 TRIM34Q9BYJ4 488 aa17.5■□□□□ 0.39
HLA-F-223ENST00000465459 UNCXA6NJT0 531 aa17.49■□□□□ 0.39
HLA-F-223ENST00000465459 ZNF213O14771 459 aa17.49■□□□□ 0.39
HLA-F-223ENST00000465459 CYP2D6P10635 497 aa17.49■□□□□ 0.39
HLA-F-223ENST00000465459 MAP3K11Q16584 847 aa17.49■□□□□ 0.39
HLA-F-223ENST00000465459 C16orf86Q6ZW13 317 aa17.49■□□□□ 0.39
HLA-F-223ENST00000465459 ZNF341Q9BYN7 854 aa17.49■□□□□ 0.39
HLA-F-223ENST00000465459 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
HLA-F-223ENST00000465459 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
HLA-F-223ENST00000465459 RNF20Q5VTR2 975 aa17.48■□□□□ 0.39
HLA-F-223ENST00000465459 DLK2Q6UY11 383 aa17.48■□□□□ 0.39
HLA-F-223ENST00000465459 ARMC9Q7Z3E5 817 aa17.48■□□□□ 0.39
HLA-F-223ENST00000465459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.48■□□□□ 0.39
HLA-F-223ENST00000465459 ZNF112Q9UJU3 913 aa17.48■□□□□ 0.39
HLA-F-223ENST00000465459 SSC5DA1L4H1 1573 aa17.48■□□□□ 0.39
HLA-F-223ENST00000465459 CYP2D7A0A087X1C5 515 aa17.47■□□□□ 0.39
HLA-F-223ENST00000465459 CELF2O95319 508 aaKnown RBP17.47■□□□□ 0.39
HLA-F-223ENST00000465459 FGRP09769 529 aa17.47■□□□□ 0.39
HLA-F-223ENST00000465459 IREB2P48200 963 aaKnown RBP17.47■□□□□ 0.39
HLA-F-223ENST00000465459 PDE4BQ07343 736 aa17.47■□□□□ 0.39
HLA-F-223ENST00000465459 TATDN1Q6P1N9 297 aa17.47■□□□□ 0.39
HLA-F-223ENST00000465459 MIGA2Q7L4E1 593 aa17.47■□□□□ 0.39
HLA-F-223ENST00000465459 C2orf69Q8N8R5 385 aa17.47■□□□□ 0.39
HLA-F-223ENST00000465459 USP26Q9BXU7 913 aa17.47■□□□□ 0.39
HLA-F-223ENST00000465459 RNF41Q9H4P4 317 aaPredicted RBP17.47■□□□□ 0.39
HLA-F-223ENST00000465459 GBA2Q9HCG7 927 aaPredicted RBP17.47■□□□□ 0.39
HLA-F-223ENST00000465459 GINM1Q9NU53 330 aa17.47■□□□□ 0.39
HLA-F-223ENST00000465459 PHF20L1A8MW92 1017 aa17.46■□□□□ 0.39
HLA-F-223ENST00000465459 USP2O75604 605 aaPredicted RBP17.46■□□□□ 0.39
HLA-F-223ENST00000465459 CDK8P49336 464 aa17.46■□□□□ 0.39
HLA-F-223ENST00000465459 SLC4A8Q2Y0W8 1093 aa17.46■□□□□ 0.39
HLA-F-223ENST00000465459 CST9Q5W186 159 aa17.46■□□□□ 0.39
HLA-F-223ENST00000465459 STAG1Q8WVM7 1258 aa17.46■□□□□ 0.39
HLA-F-223ENST00000465459 KLRG1Q96E93 195 aa17.46■□□□□ 0.39
HLA-F-223ENST00000465459 DNAJC18Q9H819 358 aa17.46■□□□□ 0.39
HLA-F-223ENST00000465459 TRPM7Q96QT4 1865 aa17.46■□□□□ 0.38
HLA-F-223ENST00000465459 LAMB1P07942 1786 aa17.45■□□□□ 0.38
HLA-F-223ENST00000465459 SIPA1L1O43166 1804 aa17.45■□□□□ 0.38
HLA-F-223ENST00000465459 ORC4O43929 436 aa17.45■□□□□ 0.38
HLA-F-223ENST00000465459 CYP21A2P08686 494 aa17.45■□□□□ 0.38
HLA-F-223ENST00000465459 MCCP23508 829 aa17.45■□□□□ 0.38
HLA-F-223ENST00000465459 FMR1Q06787 632 aaKnown RBP eCLIP17.45■□□□□ 0.38
HLA-F-223ENST00000465459 AKNAD1Q5T1N1 836 aa17.45■□□□□ 0.38
HLA-F-223ENST00000465459 DYNLL2Q96FJ2 89 aa17.45■□□□□ 0.38
HLA-F-223ENST00000465459 CCDC17Q96LX7 622 aa17.45■□□□□ 0.38
HLA-F-223ENST00000465459 ZNF408Q9H9D4 720 aa17.45■□□□□ 0.38
HLA-F-223ENST00000465459 MKNK2Q9HBH9 465 aa17.45■□□□□ 0.38
HLA-F-223ENST00000465459 PAPPA2Q9BXP8 1791 aa17.45■□□□□ 0.38
HLA-F-223ENST00000465459 SLC27A2O14975 620 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 CTNND1O60716 968 aaKnown RBP17.44■□□□□ 0.38
HLA-F-223ENST00000465459 ZKSCAN1P17029 563 aaPredicted RBP17.44■□□□□ 0.38
HLA-F-223ENST00000465459 SHMT1P34896 483 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 HSPA4P34932 840 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 HAND2P61296 217 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 MAP3K9P80192 1104 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 EVX2Q03828 476 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 CTDSPL2Q05D32 466 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 TTLL12Q14166 644 aaPredicted RBP17.44■□□□□ 0.38
HLA-F-223ENST00000465459 TSGA10IPQ3SY00 556 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 LDLRAD1Q5T700 205 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 CREB3L3Q68CJ9 461 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 MFSD6Q6ZSS7 791 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.44■□□□□ 0.387e-9■■□□□ 12.7
HLA-F-223ENST00000465459 KCNB2Q92953 911 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 WRNIP1Q96S55 665 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 NBPF3Q9H094 633 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 CNNM2Q9H8M5 875 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 ANGEL1Q9UNK9 670 aaKnown RBP17.44■□□□□ 0.38
HLA-F-223ENST00000465459 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.44■□□□□ 0.38
HLA-F-223ENST00000465459 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
HLA-F-223ENST00000465459 TMEM88BA6NKF7 163 aa17.43■□□□□ 0.38
HLA-F-223ENST00000465459 CAP2P40123 477 aa17.43■□□□□ 0.38
HLA-F-223ENST00000465459 CERKLQ49MI3 558 aaPredicted RBP17.43■□□□□ 0.38
HLA-F-223ENST00000465459 NOL9Q5SY16 702 aaKnown RBP17.43■□□□□ 0.38
HLA-F-223ENST00000465459 ANKRD13AQ8IZ07 590 aa17.43■□□□□ 0.38
HLA-F-223ENST00000465459 BACH2Q9BYV9 841 aa17.43■□□□□ 0.38
HLA-F-223ENST00000465459 FAM196BA6NMK8 535 aa17.42■□□□□ 0.38
HLA-F-223ENST00000465459 SMIM22K7EJ46 135 aa17.42■□□□□ 0.38
HLA-F-223ENST00000465459 SEC24BO95487 1268 aa17.42■□□□□ 0.38
HLA-F-223ENST00000465459 KRT32Q14532 448 aa17.42■□□□□ 0.38
HLA-F-223ENST00000465459 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
HLA-F-223ENST00000465459 ZNF444Q8N0Y2 327 aaPredicted RBP17.42■□□□□ 0.38
HLA-F-223ENST00000465459 SLC44A5Q8NCS7 719 aa17.42■□□□□ 0.38
HLA-F-223ENST00000465459 KRT23Q9C075 422 aa17.42■□□□□ 0.38
HLA-F-223ENST00000465459 UPF2Q9HAU5 1272 aaKnown RBP17.42■□□□□ 0.38
HLA-F-223ENST00000465459 CSADQ9Y600 493 aa17.42■□□□□ 0.38
HLA-F-223ENST00000465459 ASNSP08243 561 aa17.41■□□□□ 0.38
HLA-F-223ENST00000465459 RASA1P20936 1047 aa17.41■□□□□ 0.38
HLA-F-223ENST00000465459 APLP1P51693 650 aa17.41■□□□□ 0.38
HLA-F-223ENST00000465459 TRDNQ13061 729 aa17.41■□□□□ 0.38
HLA-F-223ENST00000465459 PRKG1Q13976 671 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms