RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 RBBP6Q7Z6E9 1792 aaKnown RBP25.58■■□□□ 1.69
CSPG5-204ENST00000465441 RAET1EQ8TD07 263 aa25.57■■□□□ 1.68
CSPG5-204ENST00000465441 EAF2Q96CJ1 260 aaPredicted RBP25.57■■□□□ 1.68
CSPG5-204ENST00000465441 DBNLQ9UJU6 430 aaKnown RBP25.57■■□□□ 1.68
CSPG5-204ENST00000465441 CAP2P40123 477 aa25.56■■□□□ 1.68
CSPG5-204ENST00000465441 ADGRA1Q86SQ6 560 aa25.56■■□□□ 1.68
CSPG5-204ENST00000465441 MYPNQ86TC9 1320 aa25.56■■□□□ 1.68
CSPG5-204ENST00000465441 COL2A1P02458 1487 aaPredicted RBP25.55■■□□□ 1.68
CSPG5-204ENST00000465441 FCGRTP55899 365 aa25.55■■□□□ 1.68
CSPG5-204ENST00000465441 SPP2Q13103 211 aa25.55■■□□□ 1.68
CSPG5-204ENST00000465441 MTFR1Q15390 333 aa25.55■■□□□ 1.68
CSPG5-204ENST00000465441 CEP85Q6P2H3 762 aa25.55■■□□□ 1.68
CSPG5-204ENST00000465441 TGFBRAP1Q8WUH2 860 aa25.55■■□□□ 1.68
CSPG5-204ENST00000465441 PIH1D3Q9NQM4 214 aaKnown RBP25.55■■□□□ 1.68
CSPG5-204ENST00000465441 TLR7Q9NYK1 1049 aaKnown RBP25.55■■□□□ 1.68
CSPG5-204ENST00000465441 PI4KBQ9UBF8 816 aa25.55■■□□□ 1.68
CSPG5-204ENST00000465441 PHIPQ8WWQ0 1821 aa25.55■■□□□ 1.68
CSPG5-204ENST00000465441 DOCK1Q14185 1865 aa25.54■■□□□ 1.68
CSPG5-204ENST00000465441 PLCG2P16885 1265 aa25.54■■□□□ 1.68
CSPG5-204ENST00000465441 GRK4P32298 578 aa25.54■■□□□ 1.68
CSPG5-204ENST00000465441 ZNF280CQ8ND82 737 aa25.54■■□□□ 1.68
CSPG5-204ENST00000465441 PANK1Q8TE04 598 aa25.54■■□□□ 1.68
CSPG5-204ENST00000465441 DHX36Q9H2U1 1008 aaKnown RBP25.54■■□□□ 1.68
CSPG5-204ENST00000465441 HERC5Q9UII4 1024 aaKnown RBP25.54■■□□□ 1.68
CSPG5-204ENST00000465441 GABRQQ9UN88 632 aa25.54■■□□□ 1.68
CSPG5-204ENST00000465441 AGTPBP1Q9UPW5 1226 aa25.54■■□□□ 1.68
CSPG5-204ENST00000465441 ZBED9Q6R2W3 1325 aa25.54■■□□□ 1.68
CSPG5-204ENST00000465441 PRKCZQ05513 592 aa25.53■■□□□ 1.68
CSPG5-204ENST00000465441 TREML2Q5T2D2 321 aa25.53■■□□□ 1.68
CSPG5-204ENST00000465441 MAPKAPK5Q8IW41 473 aa25.53■■□□□ 1.68
CSPG5-204ENST00000465441 IGSF3O75054 1194 aa25.52■■□□□ 1.68
CSPG5-204ENST00000465441 SMCR8Q8TEV9 937 aaPredicted RBP25.52■■□□□ 1.68
CSPG5-204ENST00000465441 TBC1D2Q9BYX2 928 aa25.52■■□□□ 1.68
CSPG5-204ENST00000465441 MKI67P46013 3256 aaKnown RBP25.51■■□□□ 1.67
CSPG5-204ENST00000465441 BRCA2P51587 3418 aa25.51■■□□□ 1.67
CSPG5-204ENST00000465441 USP17L5A8MUK1 530 aa25.51■■□□□ 1.67
CSPG5-204ENST00000465441 DYNLL1P63167 89 aaKnown RBP25.51■■□□□ 1.67
CSPG5-204ENST00000465441 FOXP4Q8IVH2 680 aaPredicted RBP25.51■■□□□ 1.67
CSPG5-204ENST00000465441 PROCA1Q8NCQ7 364 aaPredicted RBP25.51■■□□□ 1.67
CSPG5-204ENST00000465441 EXOC6BQ9Y2D4 811 aa25.51■■□□□ 1.67
CSPG5-204ENST00000465441 PTPRFP10586 1907 aa25.51■■□□□ 1.67
CSPG5-204ENST00000465441 CYP7A1P22680 504 aa25.5■■□□□ 1.67
CSPG5-204ENST00000465441 FLT1P17948 1338 aa25.49■■□□□ 1.67
CSPG5-204ENST00000465441 HMGCS2P54868 508 aa25.49■■□□□ 1.67
CSPG5-204ENST00000465441 METTL16Q86W50 562 aaKnown RBP25.49■■□□□ 1.67
CSPG5-204ENST00000465441 ANKRD13CQ8N6S4 541 aa25.49■■□□□ 1.67
CSPG5-204ENST00000465441 BIN2Q9UBW5 565 aaPredicted RBP25.49■■□□□ 1.67
CSPG5-204ENST00000465441 PALD1Q9ULE6 856 aa25.49■■□□□ 1.67
CSPG5-204ENST00000465441 NDUFB9Q9Y6M9 179 aa25.49■■□□□ 1.67
CSPG5-204ENST00000465441 MYO5AQ9Y4I1 1855 aaKnown RBP25.49■■□□□ 1.67
CSPG5-204ENST00000465441 JAG1P78504 1218 aa25.48■■□□□ 1.67
CSPG5-204ENST00000465441 SH3D19Q5HYK7 790 aa25.48■■□□□ 1.67
CSPG5-204ENST00000465441 DNAJC18Q9H819 358 aa25.48■■□□□ 1.67
CSPG5-204ENST00000465441 AS3MTQ9HBK9 375 aa25.48■■□□□ 1.67
CSPG5-204ENST00000465441 PNMA3Q9UL41 463 aa25.48■■□□□ 1.67
CSPG5-204ENST00000465441 IDH1O75874 414 aaKnown RBP25.47■■□□□ 1.67
CSPG5-204ENST00000465441 CCL5P13501 91 aa25.47■■□□□ 1.67
CSPG5-204ENST00000465441 FLT3LGP49771 235 aa25.47■■□□□ 1.67
CSPG5-204ENST00000465441 UBXN2AP68543 259 aa25.47■■□□□ 1.67
CSPG5-204ENST00000465441 ERC1Q8IUD2 1116 aa25.47■■□□□ 1.67
CSPG5-204ENST00000465441 GCC1Q96CN9 775 aa25.47■■□□□ 1.67
CSPG5-204ENST00000465441 ANTXR1Q9H6X2 564 aa25.47■■□□□ 1.67
CSPG5-204ENST00000465441 MGAMO43451 1857 aa25.47■■□□□ 1.67
CSPG5-204ENST00000465441 TNPO2O14787 897 aaKnown RBP25.46■■□□□ 1.67
CSPG5-204ENST00000465441 AACSQ86V21 672 aa25.46■■□□□ 1.67
CSPG5-204ENST00000465441 CRACR2BQ8N4Y2 399 aaPredicted RBP25.46■■□□□ 1.67
CSPG5-204ENST00000465441 SLAIN1Q8ND83 568 aa25.46■■□□□ 1.67
CSPG5-204ENST00000465441 WDR18Q9BV38 432 aa25.46■■□□□ 1.67
CSPG5-204ENST00000465441 SAP30BPQ9UHR5 308 aaKnown RBP25.46■■□□□ 1.67
CSPG5-204ENST00000465441 ADCY3O60266 1144 aa25.45■■□□□ 1.66
CSPG5-204ENST00000465441 GJB1P08034 283 aa25.45■■□□□ 1.66
CSPG5-204ENST00000465441 ASNSP08243 561 aa25.45■■□□□ 1.66
CSPG5-204ENST00000465441 PABPC4Q13310 644 aaKnown RBP eCLIP25.45■■□□□ 1.66
CSPG5-204ENST00000465441 MAGEB6Q8N7X4 407 aa25.45■■□□□ 1.66
CSPG5-204ENST00000465441 MIGA1Q8NAN2 632 aa25.45■■□□□ 1.66
CSPG5-204ENST00000465441 SHISA4Q96DD7 197 aa25.45■■□□□ 1.66
CSPG5-204ENST00000465441 RNF208Q9H0X6 261 aa25.45■■□□□ 1.66
CSPG5-204ENST00000465441 MS4A1P11836 297 aa25.44■■□□□ 1.66
CSPG5-204ENST00000465441 FAM110CQ1W6H9 321 aa25.44■■□□□ 1.66
CSPG5-204ENST00000465441 SHROOM1Q2M3G4 852 aaPredicted RBP25.44■■□□□ 1.66
CSPG5-204ENST00000465441 NKX2-3Q8TAU0 364 aa25.44■■□□□ 1.66
CSPG5-204ENST00000465441 RHPN1Q8TCX5 695 aa25.44■■□□□ 1.66
CSPG5-204ENST00000465441 TRIM34Q9BYJ4 488 aa25.44■■□□□ 1.66
CSPG5-204ENST00000465441 ASCC2Q9H1I8 757 aaPredicted RBP25.44■■□□□ 1.66
CSPG5-204ENST00000465441 IL1RAPL2Q9NP60 686 aa25.44■■□□□ 1.66
CSPG5-204ENST00000465441 SIPA1L1O43166 1804 aa25.43■■□□□ 1.66
CSPG5-204ENST00000465441 ATAD5Q96QE3 1844 aa25.43■■□□□ 1.66
CSPG5-204ENST00000465441 GDF11O95390 407 aa25.43■■□□□ 1.66
CSPG5-204ENST00000465441 HLA-DOAP06340 250 aa25.43■■□□□ 1.66
CSPG5-204ENST00000465441 GJA8P48165 433 aa25.43■■□□□ 1.66
CSPG5-204ENST00000465441 GCLCP48506 637 aaPredicted RBP25.43■■□□□ 1.66
CSPG5-204ENST00000465441 BACE1P56817 501 aa25.43■■□□□ 1.66
CSPG5-204ENST00000465441 IRF5Q13568 498 aa25.43■■□□□ 1.66
CSPG5-204ENST00000465441 HSP90AB4PQ58FF6 505 aa25.43■■□□□ 1.66
CSPG5-204ENST00000465441 PXYLP1Q8TE99 480 aa25.43■■□□□ 1.66
CSPG5-204ENST00000465441 COA7Q96BR5 231 aa25.43■■□□□ 1.66
CSPG5-204ENST00000465441 MAST2Q6P0Q8 1798 aa25.43■■□□□ 1.66
CSPG5-204ENST00000465441 ELNP15502 786 aa25.42■■□□□ 1.66
CSPG5-204ENST00000465441 USP5P45974 858 aa25.42■■□□□ 1.66
CSPG5-204ENST00000465441 MAP3K12Q12852 859 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms