RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 KRTAP4-7Q9BYR0 210 aa8.42□□□□□ -1.06
UBR4-209ENST00000465036 CYP8B1Q9UNU6 501 aa8.42□□□□□ -1.06
UBR4-209ENST00000465036 ITIH2P19823 946 aa8.41□□□□□ -1.06
UBR4-209ENST00000465036 MAPK1P28482 360 aa8.41□□□□□ -1.06
UBR4-209ENST00000465036 NKPD1Q17RQ9 610 aa8.41□□□□□ -1.06
UBR4-209ENST00000465036 LLGL2Q6P1M3 1020 aa8.41□□□□□ -1.06
UBR4-209ENST00000465036 MPRIPQ6WCQ1 1025 aa8.41□□□□□ -1.06
UBR4-209ENST00000465036 TPTE2Q6XPS3 522 aa8.41□□□□□ -1.06
UBR4-209ENST00000465036 GRIN3AQ8TCU5 1115 aa8.41□□□□□ -1.06
UBR4-209ENST00000465036 FAM53CQ9NYF3 392 aa8.41□□□□□ -1.06
UBR4-209ENST00000465036 LMCD1Q9NZU5 365 aa8.41□□□□□ -1.06
UBR4-209ENST00000465036 FMR1Q06787 632 aaKnown RBP eCLIP8.4□□□□□ -1.061e-6■■□□□ 13.9
UBR4-209ENST00000465036 ALG1LQ6GMV1 187 aa8.4□□□□□ -1.06
UBR4-209ENST00000465036 C22orf34Q6ZV56 151 aa8.4□□□□□ -1.06
UBR4-209ENST00000465036 MAPK8IP1Q9UQF2 711 aa8.4□□□□□ -1.06
UBR4-209ENST00000465036 PAGE1O75459 146 aa8.39□□□□□ -1.07
UBR4-209ENST00000465036 LRIG2O94898 1065 aa8.39□□□□□ -1.07
UBR4-209ENST00000465036 EOMESO95936 686 aa8.39□□□□□ -1.07
UBR4-209ENST00000465036 ERICH6Q7L0X2 663 aa8.39□□□□□ -1.07
UBR4-209ENST00000465036 CDC37L1Q7L3B6 337 aa8.39□□□□□ -1.07
UBR4-209ENST00000465036 ZNF507Q8TCN5 953 aa8.39□□□□□ -1.07
UBR4-209ENST00000465036 OSBPL7Q9BZF2 842 aa8.39□□□□□ -1.07
UBR4-209ENST00000465036 PITPNM2Q9BZ72 1349 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 GNAT3A8MTJ3 354 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 DCDC2CA8MYV0 355 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 CAP2P40123 477 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 ZP2Q05996 745 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 IKZF1Q13422 519 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 PKN1Q16512 942 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 UBE3DQ7Z6J8 389 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 C12orf40Q86WS4 652 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 ZSWIM9Q86XI8 627 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 ZSCAN29Q8IWY8 852 aaPredicted RBP8.38□□□□□ -1.07
UBR4-209ENST00000465036 FAM84AQ96KN4 292 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 PRDM5Q9NQX1 630 aaPredicted RBP8.38□□□□□ -1.07
UBR4-209ENST00000465036 PICK1Q9NRD5 415 aa8.38□□□□□ -1.07
UBR4-209ENST00000465036 MESP2Q0VG99 397 aa8.37□□□□□ -1.07
UBR4-209ENST00000465036 ARMCX6Q7L4S7 300 aa8.37□□□□□ -1.07
UBR4-209ENST00000465036 KSR1Q8IVT5 923 aa8.37□□□□□ -1.07
UBR4-209ENST00000465036 FOXQ1Q9C009 403 aa8.37□□□□□ -1.07
UBR4-209ENST00000465036 PCDHA4Q9UN74 947 aa8.37□□□□□ -1.07
UBR4-209ENST00000465036 CSADQ9Y600 493 aa8.37□□□□□ -1.07
UBR4-209ENST00000465036 RASIP1Q5U651 963 aa8.36□□□□□ -1.07
UBR4-209ENST00000465036 CYFIP1Q7L576 1253 aa8.36□□□□□ -1.07
UBR4-209ENST00000465036 SLC38A3Q99624 504 aa8.36□□□□□ -1.07
UBR4-209ENST00000465036 ARID3AQ99856 593 aa8.36□□□□□ -1.07
UBR4-209ENST00000465036 CTNND2Q9UQB3 1225 aa8.36□□□□□ -1.07
UBR4-209ENST00000465036 ZNF865P0CJ78 1059 aaPredicted RBP8.35□□□□□ -1.07
UBR4-209ENST00000465036 AFMP43652 599 aa8.35□□□□□ -1.07
UBR4-209ENST00000465036 ZNF124Q15973 351 aa8.35□□□□□ -1.07
UBR4-209ENST00000465036 KRTAP19-4Q3LI73 84 aa8.35□□□□□ -1.07
UBR4-209ENST00000465036 ELMO3Q96BJ8 720 aa8.35□□□□□ -1.07
UBR4-209ENST00000465036 ASB16Q96NS5 453 aa8.35□□□□□ -1.07
UBR4-209ENST00000465036 FAM8A1Q9UBU6 413 aa8.35□□□□□ -1.07
UBR4-209ENST00000465036 SPG7Q9UQ90 795 aa8.35□□□□□ -1.07
UBR4-209ENST00000465036 ZNF503-AS2A6NEH8 195 aa8.34□□□□□ -1.07
UBR4-209ENST00000465036 MAPK8P45983 427 aa8.34□□□□□ -1.07
UBR4-209ENST00000465036 KCNMB1Q16558 191 aa8.34□□□□□ -1.07
UBR4-209ENST00000465036 PCNX4Q63HM2 1172 aa8.34□□□□□ -1.07
UBR4-209ENST00000465036 FRMD6Q96NE9 622 aa8.34□□□□□ -1.07
UBR4-209ENST00000465036 C12orf49Q9H741 205 aa8.34□□□□□ -1.07
UBR4-209ENST00000465036 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.34□□□□□ -1.07
UBR4-209ENST00000465036 LRRC10BA6NIK2 292 aa8.33□□□□□ -1.08
UBR4-209ENST00000465036 SLITRK5O94991 958 aa8.33□□□□□ -1.08
UBR4-209ENST00000465036 SV2BQ7L1I2 683 aa8.33□□□□□ -1.08
UBR4-209ENST00000465036 HDXQ7Z353 690 aa8.33□□□□□ -1.08
UBR4-209ENST00000465036 MFSD2AQ8NA29 543 aa8.33□□□□□ -1.08
UBR4-209ENST00000465036 WNT10AQ9GZT5 417 aa8.33□□□□□ -1.08
UBR4-209ENST00000465036 PRDM7Q9NQW5 492 aa8.33□□□□□ -1.08
UBR4-209ENST00000465036 SEMA3GQ9NS98 782 aa8.33□□□□□ -1.08
UBR4-209ENST00000465036 SNCAIPQ9Y6H5 919 aa8.33□□□□□ -1.08
UBR4-209ENST00000465036 FBXO24O75426 580 aa8.32□□□□□ -1.08
UBR4-209ENST00000465036 ATP2B2Q01814 1243 aa8.32□□□□□ -1.08
UBR4-209ENST00000465036 SLBPQ14493 270 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBR4-209ENST00000465036 FBLN7Q53RD9 439 aa8.32□□□□□ -1.08
UBR4-209ENST00000465036 LRFN4Q6PJG9 635 aa8.32□□□□□ -1.08
UBR4-209ENST00000465036 COX4I2Q96KJ9 171 aa8.32□□□□□ -1.08
UBR4-209ENST00000465036 CELA3AP09093 270 aa8.31□□□□□ -1.08
UBR4-209ENST00000465036 INPP5AQ14642 412 aa8.31□□□□□ -1.08
UBR4-209ENST00000465036 SFRP5Q5T4F7 317 aa8.31□□□□□ -1.08
UBR4-209ENST00000465036 ZNF746Q6NUN9 644 aaPredicted RBP8.31□□□□□ -1.08
UBR4-209ENST00000465036 SPOCD1Q6ZMY3 1216 aa8.31□□□□□ -1.08
UBR4-209ENST00000465036 NPAS4Q8IUM7 802 aa8.31□□□□□ -1.08
UBR4-209ENST00000465036 TACC3Q9Y6A5 838 aa8.31□□□□□ -1.08
UBR4-209ENST00000465036 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.3□□□□□ -1.08
UBR4-209ENST00000465036 THAP5Q7Z6K1 395 aa8.3□□□□□ -1.08
UBR4-209ENST00000465036 MFSD4AQ8N468 514 aa8.3□□□□□ -1.08
UBR4-209ENST00000465036 GAL3ST3Q96A11 431 aa8.3□□□□□ -1.08
UBR4-209ENST00000465036 CCDC120Q96HB5 630 aa8.3□□□□□ -1.08
UBR4-209ENST00000465036 GLI1P08151 1106 aa8.29□□□□□ -1.08
UBR4-209ENST00000465036 GDNFP39905 211 aa8.29□□□□□ -1.08
UBR4-209ENST00000465036 PTPN11Q06124 597 aaPredicted RBP8.29□□□□□ -1.08
UBR4-209ENST00000465036 CILP2Q8IUL8 1156 aa8.29□□□□□ -1.08
UBR4-209ENST00000465036 HID1Q8IV36 788 aa8.29□□□□□ -1.08
UBR4-209ENST00000465036 PLPPR2Q96GM1 343 aa8.29□□□□□ -1.08
UBR4-209ENST00000465036 HSPA12BQ96MM6 686 aa8.29□□□□□ -1.08
UBR4-209ENST00000465036 PPP1R16BQ96T49 567 aa8.29□□□□□ -1.08
UBR4-209ENST00000465036 SETDB2Q96T68 719 aa8.29□□□□□ -1.08
UBR4-209ENST00000465036 FBRSQ9HAH7 460 aa8.29□□□□□ -1.08
UBR4-209ENST00000465036 WWC3Q9ULE0 1092 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms