RNA–Protein interactions for RNA: ENST00000465007.1

ATP1A3-203, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 3

Gene ATP1A3, Length 255 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-203ENST00000465007 CRACR2BQ8N4Y2 399 aaPredicted RBP18.52■□□□□ 0.56
ATP1A3-203ENST00000465007 NSUN4Q96CB9 384 aaKnown RBP18.52■□□□□ 0.56
ATP1A3-203ENST00000465007 UNC93B1Q9H1C4 597 aa18.52■□□□□ 0.56
ATP1A3-203ENST00000465007 DHX36Q9H2U1 1008 aaKnown RBP18.52■□□□□ 0.56
ATP1A3-203ENST00000465007 TMOD4Q9NZQ9 345 aa18.52■□□□□ 0.56
ATP1A3-203ENST00000465007 PI4KBQ9UBF8 816 aa18.52■□□□□ 0.56
ATP1A3-203ENST00000465007 HERC5Q9UII4 1024 aaKnown RBP18.52■□□□□ 0.56
ATP1A3-203ENST00000465007 MYH13Q9UKX3 1938 aa18.52■□□□□ 0.56
ATP1A3-203ENST00000465007 CCER2I3L3R5 266 aa18.51■□□□□ 0.55
ATP1A3-203ENST00000465007 EVI5O60447 810 aa18.51■□□□□ 0.55
ATP1A3-203ENST00000465007 INHAP05111 366 aa18.51■□□□□ 0.55
ATP1A3-203ENST00000465007 ELNP15502 786 aa18.51■□□□□ 0.55
ATP1A3-203ENST00000465007 CLUAP1Q96AJ1 413 aa18.51■□□□□ 0.55
ATP1A3-203ENST00000465007 ATRNL1Q5VV63 1379 aa18.51■□□□□ 0.55
ATP1A3-203ENST00000465007 CAP2P40123 477 aa18.5■□□□□ 0.55
ATP1A3-203ENST00000465007 RHBDL3P58872 404 aa18.5■□□□□ 0.55
ATP1A3-203ENST00000465007 IRX3P78415 501 aaPredicted RBP18.5■□□□□ 0.55
ATP1A3-203ENST00000465007 FAM110CQ1W6H9 321 aa18.5■□□□□ 0.55
ATP1A3-203ENST00000465007 SHISA4Q96DD7 197 aa18.5■□□□□ 0.55
ATP1A3-203ENST00000465007 DEFB118Q96PH6 123 aa18.5■□□□□ 0.55
ATP1A3-203ENST00000465007 HTTP42858 3142 aa18.49■□□□□ 0.55
ATP1A3-203ENST00000465007 FAM196BA6NMK8 535 aa18.49■□□□□ 0.55
ATP1A3-203ENST00000465007 ARID4AP29374 1257 aaPredicted RBP18.49■□□□□ 0.55
ATP1A3-203ENST00000465007 HMGCS2P54868 508 aa18.49■□□□□ 0.55
ATP1A3-203ENST00000465007 CCDC84Q86UT8 332 aaPredicted RBP18.49■□□□□ 0.55
ATP1A3-203ENST00000465007 HLA-DOAP06340 250 aa18.48■□□□□ 0.55
ATP1A3-203ENST00000465007 ASNSP08243 561 aa18.48■□□□□ 0.55
ATP1A3-203ENST00000465007 TRIM27P14373 513 aa18.48■□□□□ 0.55
ATP1A3-203ENST00000465007 TREML2Q5T2D2 321 aa18.48■□□□□ 0.55
ATP1A3-203ENST00000465007 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
ATP1A3-203ENST00000465007 PI16Q6UXB8 463 aa18.48■□□□□ 0.55
ATP1A3-203ENST00000465007 FOXP4Q8IVH2 680 aaPredicted RBP18.48■□□□□ 0.55
ATP1A3-203ENST00000465007 FTSJ3Q8IY81 847 aaKnown RBP18.48■□□□□ 0.55
ATP1A3-203ENST00000465007 CWC22Q9HCG8 908 aaKnown RBP18.48■□□□□ 0.55
ATP1A3-203ENST00000465007 AATFQ9NY61 560 aaKnown RBP eCLIP18.48■□□□□ 0.55
ATP1A3-203ENST00000465007 RFX7Q2KHR2 1363 aa18.47■□□□□ 0.55
ATP1A3-203ENST00000465007 SURF6O75683 361 aaKnown RBP18.47■□□□□ 0.55
ATP1A3-203ENST00000465007 SH3RF3Q8TEJ3 882 aaPredicted RBP18.47■□□□□ 0.55
ATP1A3-203ENST00000465007 SNRKQ9NRH2 765 aa18.47■□□□□ 0.55
ATP1A3-203ENST00000465007 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.47■□□□□ 0.55
ATP1A3-203ENST00000465007 IGSF3O75054 1194 aa18.46■□□□□ 0.55
ATP1A3-203ENST00000465007 SLURP2P0DP57 97 aa18.46■□□□□ 0.55
ATP1A3-203ENST00000465007 MCAMP43121 646 aa18.46■□□□□ 0.55
ATP1A3-203ENST00000465007 NECAB2Q7Z6G3 386 aa18.46■□□□□ 0.55
ATP1A3-203ENST00000465007 TGFBRAP1Q8WUH2 860 aa18.46■□□□□ 0.55
ATP1A3-203ENST00000465007 ASCC2Q9H1I8 757 aaPredicted RBP18.46■□□□□ 0.55
ATP1A3-203ENST00000465007 GPR108Q9NPR9 543 aa18.46■□□□□ 0.55
ATP1A3-203ENST00000465007 MYH2Q9UKX2 1941 aa18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 PNMA6EA0A0J9YXQ4 647 aa18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 C19orf81C9J6K1 198 aa18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 BCAR3O75815 825 aa18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 HMGCRP04035 888 aa18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 PDE3AQ14432 1141 aa18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 TNNI3KQ59H18 835 aa18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 CERS3Q8IU89 383 aa18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 MAPKAPK5Q8IW41 473 aa18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 HMX1Q9NP08 348 aaPredicted RBP18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 GINM1Q9NU53 330 aa18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 RBM27Q9P2N5 1060 aaKnown RBP18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 FPGT-TNNI3KV9GXZ4 949 aa18.45■□□□□ 0.54
ATP1A3-203ENST00000465007 CENPFP49454 3210 aa18.44■□□□□ 0.54
ATP1A3-203ENST00000465007 BACE1P56817 501 aa18.44■□□□□ 0.54
ATP1A3-203ENST00000465007 MTMR2Q13614 643 aa18.44■□□□□ 0.54
ATP1A3-203ENST00000465007 GPRC5AQ8NFJ5 357 aa18.44■□□□□ 0.54
ATP1A3-203ENST00000465007 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.44■□□□□ 0.54
ATP1A3-203ENST00000465007 USP17L10C9JJH3 530 aa18.43■□□□□ 0.54
ATP1A3-203ENST00000465007 USP5P45974 858 aa18.43■□□□□ 0.54
ATP1A3-203ENST00000465007 PPP4CP60510 307 aa18.43■□□□□ 0.54
ATP1A3-203ENST00000465007 SH3D19Q5HYK7 790 aa18.43■□□□□ 0.54
ATP1A3-203ENST00000465007 ZNF384Q8TF68 577 aa18.43■□□□□ 0.54
ATP1A3-203ENST00000465007 WDR18Q9BV38 432 aa18.43■□□□□ 0.54
ATP1A3-203ENST00000465007 ZSWIM8A7E2V4 1837 aa18.43■□□□□ 0.54
ATP1A3-203ENST00000465007 DOCK2Q92608 1830 aa18.43■□□□□ 0.54
ATP1A3-203ENST00000465007 COL2A1P02458 1487 aaPredicted RBP18.43■□□□□ 0.54
ATP1A3-203ENST00000465007 ZBTB7BO15156 539 aaPredicted RBP18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 ATP8B2P98198 1209 aa18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 UBE2Q1Q7Z7E8 422 aa18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 TRMT44Q8IYL2 757 aaKnown RBP18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 TMEM57Q8N5G2 664 aa18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 ANKLE1Q8NAG6 615 aa18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 GTF3C2Q8WUA4 911 aaPredicted RBP18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 PAWRQ96IZ0 340 aaKnown RBP18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 NUDT12Q9BQG2 462 aa18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 PAK6Q9NQU5 681 aaPredicted RBP18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 PALD1Q9ULE6 856 aa18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 RPTORQ8N122 1335 aa18.42■□□□□ 0.54
ATP1A3-203ENST00000465007 IDH1O75874 414 aaKnown RBP18.41■□□□□ 0.54
ATP1A3-203ENST00000465007 CYP7A1P22680 504 aa18.41■□□□□ 0.54
ATP1A3-203ENST00000465007 ITPRIPQ8IWB1 547 aa18.41■□□□□ 0.54
ATP1A3-203ENST00000465007 SOCS4Q8WXH5 440 aa18.41■□□□□ 0.54
ATP1A3-203ENST00000465007 FEZ1Q99689 392 aa18.41■□□□□ 0.54
ATP1A3-203ENST00000465007 DBNDD2Q9BQY9 259 aa18.41■□□□□ 0.54
ATP1A3-203ENST00000465007 NBPF3Q9H094 633 aa18.41■□□□□ 0.54
ATP1A3-203ENST00000465007 SAP30BPQ9UHR5 308 aaKnown RBP18.41■□□□□ 0.54
ATP1A3-203ENST00000465007 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.41■□□□□ 0.54
ATP1A3-203ENST00000465007 MKI67P46013 3256 aaKnown RBP18.4■□□□□ 0.54
ATP1A3-203ENST00000465007 GLRX3O76003 335 aaKnown RBP18.4■□□□□ 0.54
ATP1A3-203ENST00000465007 CYP2B6P20813 491 aa18.4■□□□□ 0.54
ATP1A3-203ENST00000465007 MAPK4P31152 587 aa18.4■□□□□ 0.54
ATP1A3-203ENST00000465007 HOXA7P31268 230 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms