RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 LAMB1P07942 1786 aa15.13■□□□□ 0.01
SUPT20H-204ENST00000464572 PRDM1O75626 825 aa15.13■□□□□ 0.01
SUPT20H-204ENST00000464572 CPA1P15085 419 aa15.13■□□□□ 0.01
SUPT20H-204ENST00000464572 TRDNQ13061 729 aa15.13■□□□□ 0.01
SUPT20H-204ENST00000464572 APOBEC3FQ8IUX4 373 aaKnown RBP15.13■□□□□ 0.01
SUPT20H-204ENST00000464572 CSRNP1Q96S65 589 aa15.13■□□□□ 0.01
SUPT20H-204ENST00000464572 RNF41Q9H4P4 317 aaPredicted RBP15.13■□□□□ 0.01
SUPT20H-204ENST00000464572 PI4KBQ9UBF8 816 aa15.13■□□□□ 0.01
SUPT20H-204ENST00000464572 NEDD4P46934 1319 aa15.13■□□□□ 0.01
SUPT20H-204ENST00000464572 ATRNL1Q5VV63 1379 aa15.13■□□□□ 0.01
SUPT20H-204ENST00000464572 VEGFAP15692 232 aaPredicted RBP15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 RRP12Q5JTH9 1297 aaKnown RBP15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 PNMA8AQ86V59 439 aaPredicted RBP15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 CDAN1Q8IWY9 1227 aa15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 SLC44A5Q8NCS7 719 aa15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 NCOA7Q8NI08 942 aa15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 SERPINB13Q9UIV8 391 aa15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 RBM19Q9Y4C8 960 aaKnown RBP15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 SLURP2P0DP57 97 aa15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 PDE4BQ07343 736 aa15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 RALYLQ86SE5 291 aaKnown RBP15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 DCPSQ96C86 337 aaKnown RBP15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 TM6SF1Q9BZW5 370 aa15.12■□□□□ 0.01
SUPT20H-204ENST00000464572 ROBO3Q96MS0 1386 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 NKX2-3Q8TAU0 364 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 ZSWIM6Q9HCJ5 1215 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 COL2A1P02458 1487 aaPredicted RBP15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 PITPNM2Q9BZ72 1349 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 B4E1Z4 1266 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 FGRP09769 529 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 GABPAQ06546 454 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 RABEP1Q15276 862 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 BLOC1S2Q6QNY1 142 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 C16orf86Q6ZW13 317 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 CRACR2BQ8N4Y2 399 aaPredicted RBP15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 CNNM2Q9H8M5 875 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 MKNK2Q9HBH9 465 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 NMRK2Q9NPI5 230 aa15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 POLR2AP24928 1970 aaKnown RBP15.11■□□□□ 0.01
SUPT20H-204ENST00000464572 CDK8P49336 464 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 NEK4P51957 841 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 ZC3H15Q8WU90 426 aaKnown RBP15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 KRT23Q9C075 422 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 EHD4Q9H223 541 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 PGAP2Q9UHJ9 254 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 CYP46A1Q9Y6A2 500 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 FAM196BA6NMK8 535 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 PCP11498 1178 aaKnown RBP15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 PRAMEF18Q5VWM3 479 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 RUFY3Q7L099 469 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 FOXP4Q8IVH2 680 aaPredicted RBP15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 TEPSINQ96N21 525 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 KDM4AO75164 1064 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 HMGB1P09429 215 aaKnown RBP15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 CHST3Q7LGC8 479 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 TCEANC2Q96MN5 208 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 TRIM34Q9BYJ4 488 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 ZNF287Q9HBT7 754 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
SUPT20H-204ENST00000464572 ORC4O43929 436 aa15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 RANBP6O60518 1105 aaKnown RBP15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 POTEIP0CG38 1075 aa15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 POTEJP0CG39 1038 aa15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 SULF1Q8IWU6 871 aa15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 MB21D2Q8IYB1 491 aaPredicted RBP15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 DNAJC18Q9H819 358 aa15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 RPS6KB1P23443 525 aa15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 DHX32Q7L7V1 743 aaKnown RBP15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 ESR2Q92731 530 aa15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 ZSWIM5Q9P217 1185 aa15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 SWAP70Q9UH65 585 aa15.09■□□□□ 0.01
SUPT20H-204ENST00000464572 NBPF12Q5TAG4 269 aaPredicted RBP15.08■□□□□ 0
SUPT20H-204ENST00000464572 MIGA2Q7L4E1 593 aa15.08■□□□□ 0
SUPT20H-204ENST00000464572 KRT26Q7Z3Y9 468 aa15.08■□□□□ 0
SUPT20H-204ENST00000464572 SIPA1L1O43166 1804 aa15.08■□□□□ 0
SUPT20H-204ENST00000464572 MCM5P33992 734 aa15.08■□□□□ 0
SUPT20H-204ENST00000464572 FAM47AQ5JRC9 791 aa15.08■□□□□ 0
SUPT20H-204ENST00000464572 DLK2Q6UY11 383 aa15.08■□□□□ 0
SUPT20H-204ENST00000464572 CYB5R4Q7L1T6 521 aa15.08■□□□□ 0
SUPT20H-204ENST00000464572 METTL16Q86W50 562 aaKnown RBP15.08■□□□□ 0
SUPT20H-204ENST00000464572 ZNF444Q8N0Y2 327 aaPredicted RBP15.08■□□□□ 0
SUPT20H-204ENST00000464572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.08■□□□□ 0
SUPT20H-204ENST00000464572 ADM5C9JUS6 153 aa15.07■□□□□ 0
SUPT20H-204ENST00000464572 RASA1P20936 1047 aa15.07■□□□□ 0
SUPT20H-204ENST00000464572 SHMT1P34896 483 aa15.07■□□□□ 0
SUPT20H-204ENST00000464572 LRRC2Q9BYS8 371 aa15.07■□□□□ 0
SUPT20H-204ENST00000464572 PDRG1Q9NUG6 133 aa15.07■□□□□ 0
SUPT20H-204ENST00000464572 HERC5Q9UII4 1024 aaKnown RBP15.07■□□□□ 0
SUPT20H-204ENST00000464572 PPP2R3BQ9Y5P8 575 aa15.07■□□□□ 0
SUPT20H-204ENST00000464572 TSPY2A6NKD2 308 aa15.07■□□□□ 0
SUPT20H-204ENST00000464572 ANTXR2P58335 489 aa15.07■□□□□ 0
SUPT20H-204ENST00000464572 EXOSC10Q01780 885 aaKnown RBP15.07■□□□□ 0
SUPT20H-204ENST00000464572 PRC1O43663 620 aa15.06■□□□□ 0
SUPT20H-204ENST00000464572 USP48Q86UV5 1035 aa15.06■□□□□ 0
SUPT20H-204ENST00000464572 TFAP4Q01664 338 aa15.06■□□□□ 0
SUPT20H-204ENST00000464572 TTC14Q96N46 770 aa15.06■□□□□ 0
SUPT20H-204ENST00000464572 ZKSCAN3Q9BRR0 538 aa15.06■□□□□ 0
SUPT20H-204ENST00000464572 ST18O60284 1047 aa15.06■□□□□ 0
SUPT20H-204ENST00000464572 TSPY3P0CV98 308 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms