RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PTPRAP18433 802 aa15.74■□□□□ 0.11
XRN1-203ENST00000463916 MOGSQ13724 837 aa15.74■□□□□ 0.11
XRN1-203ENST00000463916 OTUD7BQ6GQQ9 843 aa15.74■□□□□ 0.11
XRN1-203ENST00000463916 OTUD7AQ8TE49 926 aaPredicted RBP15.74■□□□□ 0.11
XRN1-203ENST00000463916 ABHD8Q96I13 439 aa15.74■□□□□ 0.11
XRN1-203ENST00000463916 ECHDC1Q9NTX5 307 aa15.74■□□□□ 0.11
XRN1-203ENST00000463916 PI4KBQ9UBF8 816 aa15.74■□□□□ 0.11
XRN1-203ENST00000463916 KCNH4Q9UQ05 1017 aa15.74■□□□□ 0.11
XRN1-203ENST00000463916 BTBD19C9JJ37 291 aa15.74■□□□□ 0.11
XRN1-203ENST00000463916 CETPP11597 493 aa15.74■□□□□ 0.11
XRN1-203ENST00000463916 DHX36Q9H2U1 1008 aaKnown RBP15.74■□□□□ 0.11
XRN1-203ENST00000463916 DNAJC18Q9H819 358 aa15.74■□□□□ 0.11
XRN1-203ENST00000463916 SUPT16HQ9Y5B9 1047 aaKnown RBP15.74■□□□□ 0.11
XRN1-203ENST00000463916 TMED8Q6PL24 325 aaPredicted RBP15.73■□□□□ 0.11
XRN1-203ENST00000463916 MAGEB6P1A0A0J9YX57 407 aa15.72■□□□□ 0.11
XRN1-203ENST00000463916 JAG1P78504 1218 aa15.72■□□□□ 0.11
XRN1-203ENST00000463916 METTL16Q86W50 562 aaKnown RBP15.72■□□□□ 0.11
XRN1-203ENST00000463916 EXOC6Q8TAG9 804 aa15.72■□□□□ 0.11
XRN1-203ENST00000463916 PICK1Q9NRD5 415 aa15.72■□□□□ 0.11
XRN1-203ENST00000463916 AFG3L2Q9Y4W6 797 aa15.72■□□□□ 0.11
XRN1-203ENST00000463916 FKTNO75072 461 aa15.72■□□□□ 0.11
XRN1-203ENST00000463916 ADD2P35612 726 aa15.72■□□□□ 0.11
XRN1-203ENST00000463916 USP5P45974 858 aa15.72■□□□□ 0.11
XRN1-203ENST00000463916 CAP1Q01518 475 aa15.72■□□□□ 0.11
XRN1-203ENST00000463916 SHROOM1Q2M3G4 852 aaPredicted RBP15.72■□□□□ 0.11
XRN1-203ENST00000463916 HERC5Q9UII4 1024 aaKnown RBP15.72■□□□□ 0.11
XRN1-203ENST00000463916 CAP2P40123 477 aa15.71■□□□□ 0.11
XRN1-203ENST00000463916 HDAC1Q13547 482 aaPredicted RBP15.71■□□□□ 0.11
XRN1-203ENST00000463916 TAF1CQ15572 869 aaPredicted RBP15.71■□□□□ 0.11
XRN1-203ENST00000463916 CTU1Q7Z7A3 348 aaKnown RBP15.71■□□□□ 0.11
XRN1-203ENST00000463916 LCORLQ8N3X6 602 aa15.71■□□□□ 0.11
XRN1-203ENST00000463916 DOCK1Q14185 1865 aa15.71■□□□□ 0.11
XRN1-203ENST00000463916 PHIPQ8WWQ0 1821 aa15.71■□□□□ 0.11
XRN1-203ENST00000463916 CXCL11O14625 94 aa15.71■□□□□ 0.1
XRN1-203ENST00000463916 EVX2Q03828 476 aa15.71■□□□□ 0.1
XRN1-203ENST00000463916 CERS3Q8IU89 383 aa15.71■□□□□ 0.1
XRN1-203ENST00000463916 FOXP4Q8IVH2 680 aaPredicted RBP15.71■□□□□ 0.1
XRN1-203ENST00000463916 GPAT2Q6NUI2 795 aa15.7■□□□□ 0.1
XRN1-203ENST00000463916 SDR42E1Q8WUS8 393 aa15.7■□□□□ 0.1
XRN1-203ENST00000463916 ARMT1Q9H993 441 aa15.7■□□□□ 0.1
XRN1-203ENST00000463916 TRIM75PA6NK02 468 aa15.69■□□□□ 0.1
XRN1-203ENST00000463916 PLCD1P51178 756 aa15.69■□□□□ 0.1
XRN1-203ENST00000463916 ANKRD45Q5TZF3 282 aa15.69■□□□□ 0.1
XRN1-203ENST00000463916 MYH1P12882 1939 aa15.69■□□□□ 0.1
XRN1-203ENST00000463916 A0A0G2JLL6 359 aaPredicted RBP15.69■□□□□ 0.1
XRN1-203ENST00000463916 PRKAB2O43741 272 aa15.69■□□□□ 0.1
XRN1-203ENST00000463916 PRRT2Q7Z6L0 340 aaPredicted RBP15.69■□□□□ 0.1
XRN1-203ENST00000463916 CRACR2BQ8N4Y2 399 aaPredicted RBP15.69■□□□□ 0.1
XRN1-203ENST00000463916 PI4K2BQ8TCG2 481 aa15.69■□□□□ 0.1
XRN1-203ENST00000463916 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.69■□□□□ 0.14e-7■■■□□ 17.6
XRN1-203ENST00000463916 ZFYVE28Q9HCC9 887 aa15.69■□□□□ 0.1
XRN1-203ENST00000463916 PDHXO00330 501 aa15.68■□□□□ 0.1
XRN1-203ENST00000463916 MBD4O95243 580 aa15.68■□□□□ 0.1
XRN1-203ENST00000463916 ANKRD23Q86SG2 305 aa15.68■□□□□ 0.1
XRN1-203ENST00000463916 GPATCH3Q96I76 525 aa15.68■□□□□ 0.1
XRN1-203ENST00000463916 CRNKL1Q9BZJ0 848 aaKnown RBP15.68■□□□□ 0.1
XRN1-203ENST00000463916 PUS7LQ9H0K6 701 aaKnown RBP15.68■□□□□ 0.1
XRN1-203ENST00000463916 ZCCHC17Q9NP64 241 aaKnown RBP15.68■□□□□ 0.1
XRN1-203ENST00000463916 SALL3Q9BXA9 1300 aa15.68■□□□□ 0.1
XRN1-203ENST00000463916 ATAD5Q96QE3 1844 aa15.68■□□□□ 0.1
XRN1-203ENST00000463916 TLR2O60603 784 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 GDF11O95390 407 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 IGHDP01880 384 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 HLA-DOAP06340 250 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 SP3Q02447 781 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 SPP2Q13103 211 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 UBE3CQ15386 1083 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 KBTBD3Q8NAB2 608 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 CD99L2Q8TCZ2 262 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 DCP1AQ9NPI6 582 aaPredicted RBP15.67■□□□□ 0.1
XRN1-203ENST00000463916 BRCA2P51587 3418 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 PTPRFP10586 1907 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 AAMPQ13685 434 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 DDX60LQ5H9U9 1706 aaKnown RBP15.67■□□□□ 0.1
XRN1-203ENST00000463916 TTC41PQ6P2S7 1318 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 GCC1Q96CN9 775 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 SERPINB13Q9UIV8 391 aa15.67■□□□□ 0.1
XRN1-203ENST00000463916 MYH7P12883 1935 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 CCDC85CA6NKD9 419 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 ZNF280CQ8ND82 737 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 SMIM22K7EJ46 135 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 CYP2C8P10632 490 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 CYP2D6P10635 497 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 MX1P20591 662 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 TATDN1Q6P1N9 297 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 GADL1Q6ZQY3 521 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 OTOP1Q7RTM1 612 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 TRIM34Q9BYJ4 488 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 EHD4Q9H223 541 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 MCM9Q9NXL9 1143 aa15.66■□□□□ 0.1
XRN1-203ENST00000463916 USP17L5A8MUK1 530 aa15.65■□□□□ 0.1
XRN1-203ENST00000463916 IRX6P78412 446 aaPredicted RBP15.65■□□□□ 0.1
XRN1-203ENST00000463916 C17orf99Q6UX52 265 aa15.65■□□□□ 0.1
XRN1-203ENST00000463916 FASTKD5Q7L8L6 764 aaKnown RBP15.65■□□□□ 0.1
XRN1-203ENST00000463916 TTC6Q86TZ1 520 aa15.65■□□□□ 0.1
XRN1-203ENST00000463916 CPA4Q9UI42 421 aa15.65■□□□□ 0.1
XRN1-203ENST00000463916 TRIM17Q9Y577 477 aa15.65■□□□□ 0.1
XRN1-203ENST00000463916 ADGRA2Q96PE1 1338 aa15.65■□□□□ 0.1
XRN1-203ENST00000463916 POLR3DP05423 398 aaPredicted RBP15.64■□□□□ 0.09
XRN1-203ENST00000463916 ASNSP08243 561 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms