RNA–Protein interactions for RNA: ENST00000463839.2

ITM2B-203, Transcript of integral membrane protein 2B, humanhuman

TSL 3

Gene ITM2B, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-203ENST00000463839 FAM177A1Q8N128 213 aaPredicted RBP6.77□□□□□ -1.33
ITM2B-203ENST00000463839 BACH2Q9BYV9 841 aa6.77□□□□□ -1.33
ITM2B-203ENST00000463839 CCDC87Q9NVE4 849 aa6.77□□□□□ -1.33
ITM2B-203ENST00000463839 PCOLCE2Q9UKZ9 415 aa6.77□□□□□ -1.33
ITM2B-203ENST00000463839 CTNND2Q9UQB3 1225 aa6.77□□□□□ -1.33
ITM2B-203ENST00000463839 NDUFB5O43674 189 aa6.76□□□□□ -1.33
ITM2B-203ENST00000463839 KRT1P04264 644 aa6.76□□□□□ -1.33
ITM2B-203ENST00000463839 AMIGO3Q86WK7 504 aa6.76□□□□□ -1.33
ITM2B-203ENST00000463839 ASB11Q8WXH4 323 aa6.76□□□□□ -1.33
ITM2B-203ENST00000463839 HEXIM2Q96MH2 286 aaKnown RBP6.76□□□□□ -1.33
ITM2B-203ENST00000463839 FAM161BQ96MY7 647 aa6.76□□□□□ -1.33
ITM2B-203ENST00000463839 BRPF3Q9ULD4 1205 aa6.76□□□□□ -1.33
ITM2B-203ENST00000463839 IGF2BP3O00425 579 aaKnown RBP eCLIP6.75□□□□□ -1.33
ITM2B-203ENST00000463839 MAPK8P45983 427 aa6.75□□□□□ -1.33
ITM2B-203ENST00000463839 TTLL4Q14679 1199 aa6.75□□□□□ -1.33
ITM2B-203ENST00000463839 PRPF40BQ6NWY9 871 aaKnown RBP6.75□□□□□ -1.33
ITM2B-203ENST00000463839 RBCK1Q9BYM8 510 aa6.75□□□□□ -1.33
ITM2B-203ENST00000463839 RNF19AQ9NV58 838 aa6.75□□□□□ -1.33
ITM2B-203ENST00000463839 HSP90B1P14625 803 aaKnown RBP6.74□□□□□ -1.33
ITM2B-203ENST00000463839 HDLBPQ00341 1268 aaKnown RBP6.74□□□□□ -1.33
ITM2B-203ENST00000463839 ANKLE2Q86XL3 938 aa6.74□□□□□ -1.33
ITM2B-203ENST00000463839 LIN37Q96GY3 246 aaPredicted RBP6.74□□□□□ -1.33
ITM2B-203ENST00000463839 ABCB6Q9NP58 842 aa6.74□□□□□ -1.33
ITM2B-203ENST00000463839 PRDM7Q9NQW5 492 aa6.74□□□□□ -1.33
ITM2B-203ENST00000463839 B8ZZF3 427 aa6.73□□□□□ -1.33
ITM2B-203ENST00000463839 NEFMP07197 916 aa6.73□□□□□ -1.33
ITM2B-203ENST00000463839 GLI1P08151 1106 aa6.73□□□□□ -1.33
ITM2B-203ENST00000463839 ZSCAN22P10073 491 aaPredicted RBP6.73□□□□□ -1.33
ITM2B-203ENST00000463839 AFMP43652 599 aa6.73□□□□□ -1.33
ITM2B-203ENST00000463839 HNRNPUQ00839 825 aaKnown RBP eCLIP6.73□□□□□ -1.33
ITM2B-203ENST00000463839 XPCQ01831 940 aaPredicted RBP6.73□□□□□ -1.33
ITM2B-203ENST00000463839 ZP2Q05996 745 aa6.73□□□□□ -1.33
ITM2B-203ENST00000463839 MRPL58Q14197 206 aaKnown RBP6.73□□□□□ -1.33
ITM2B-203ENST00000463839 FYB2Q5VWT5 728 aa6.73□□□□□ -1.33
ITM2B-203ENST00000463839 USPL1Q5W0Q7 1092 aa6.73□□□□□ -1.33
ITM2B-203ENST00000463839 ARHGAP27Q6ZUM4 889 aa6.73□□□□□ -1.33
ITM2B-203ENST00000463839 SPACA3Q8IXA5 215 aa6.73□□□□□ -1.33
ITM2B-203ENST00000463839 PUS7Q96PZ0 661 aaKnown RBP6.73□□□□□ -1.33
ITM2B-203ENST00000463839 EHD4Q9H223 541 aa6.73□□□□□ -1.33
ITM2B-203ENST00000463839 LMCD1Q9NZU5 365 aa6.73□□□□□ -1.33
ITM2B-203ENST00000463839 TREHO43280 583 aa6.72□□□□□ -1.33
ITM2B-203ENST00000463839 LDHBP07195 334 aaKnown RBP6.72□□□□□ -1.33
ITM2B-203ENST00000463839 NEFLP07196 543 aa6.72□□□□□ -1.33
ITM2B-203ENST00000463839 GSTP1P09211 210 aaKnown RBP6.72□□□□□ -1.33
ITM2B-203ENST00000463839 FMR1Q06787 632 aaKnown RBP eCLIP6.72□□□□□ -1.33
ITM2B-203ENST00000463839 FAAP100Q0VG06 881 aa6.72□□□□□ -1.33
ITM2B-203ENST00000463839 SYDE1Q6ZW31 735 aaPredicted RBP6.72□□□□□ -1.33
ITM2B-203ENST00000463839 PDZD3Q86UT5 571 aa6.72□□□□□ -1.33
ITM2B-203ENST00000463839 TMEM87AQ8NBN3 555 aa6.72□□□□□ -1.33
ITM2B-203ENST00000463839 ISL2Q96A47 359 aa6.72□□□□□ -1.33
ITM2B-203ENST00000463839 PARP2Q9UGN5 583 aa6.72□□□□□ -1.33
ITM2B-203ENST00000463839 SCAMP3O14828 347 aaKnown RBP6.71□□□□□ -1.34
ITM2B-203ENST00000463839 RNGTTO60942 597 aaKnown RBP6.71□□□□□ -1.34
ITM2B-203ENST00000463839 HMGB1P09429 215 aaKnown RBP6.71□□□□□ -1.34
ITM2B-203ENST00000463839 HCLS1P14317 486 aaPredicted RBP6.71□□□□□ -1.34
ITM2B-203ENST00000463839 PLCB3Q01970 1234 aa6.71□□□□□ -1.34
ITM2B-203ENST00000463839 IKZF1Q13422 519 aa6.71□□□□□ -1.34
ITM2B-203ENST00000463839 TOP6BLQ8N6T0 577 aa6.71□□□□□ -1.34
ITM2B-203ENST00000463839 SETDB2Q96T68 719 aa6.71□□□□□ -1.34
ITM2B-203ENST00000463839 DUSP9Q99956 384 aaKnown RBP6.71□□□□□ -1.34
ITM2B-203ENST00000463839 MRS2Q9HD23 443 aa6.71□□□□□ -1.34
ITM2B-203ENST00000463839 WWC3Q9ULE0 1092 aa6.71□□□□□ -1.34
ITM2B-203ENST00000463839 TMEM238LA0A1B0GVL6 79 aa6.7□□□□□ -1.34
ITM2B-203ENST00000463839 GPR182O15218 404 aa6.7□□□□□ -1.34
ITM2B-203ENST00000463839 C1QTNF9P0C862 333 aa6.7□□□□□ -1.34
ITM2B-203ENST00000463839 ITIH2P19823 946 aa6.7□□□□□ -1.34
ITM2B-203ENST00000463839 ERVK-24P63145 666 aa6.7□□□□□ -1.34
ITM2B-203ENST00000463839 NKPD1Q17RQ9 610 aa6.7□□□□□ -1.34
ITM2B-203ENST00000463839 ZC3H12AQ5D1E8 599 aaKnown RBP6.7□□□□□ -1.34
ITM2B-203ENST00000463839 LDLRAD1Q5T700 205 aa6.7□□□□□ -1.34
ITM2B-203ENST00000463839 PRR23BQ6ZRT6 265 aa6.7□□□□□ -1.34
ITM2B-203ENST00000463839 RNF214Q8ND24 703 aa6.7□□□□□ -1.34
ITM2B-203ENST00000463839 GTF2IRD1Q9UHL9 959 aa6.7□□□□□ -1.34
ITM2B-203ENST00000463839 PITPNM2Q9BZ72 1349 aa6.7□□□□□ -1.34
ITM2B-203ENST00000463839 CDK11BP21127 795 aaKnown RBP6.69□□□□□ -1.34
ITM2B-203ENST00000463839 CLCN7P51798 805 aa6.69□□□□□ -1.34
ITM2B-203ENST00000463839 DSC3Q14574 896 aa6.69□□□□□ -1.34
ITM2B-203ENST00000463839 SF3A1Q15459 793 aaKnown RBP6.69□□□□□ -1.34
ITM2B-203ENST00000463839 UBXN4Q92575 508 aa6.69□□□□□ -1.34
ITM2B-203ENST00000463839 VTI1BQ9UEU0 232 aa6.69□□□□□ -1.34
ITM2B-203ENST00000463839 CDK11AQ9UQ88 783 aaPredicted RBP6.69□□□□□ -1.34
ITM2B-203ENST00000463839 SMARCA5O60264 1052 aaPredicted RBP6.68□□□□□ -1.34
ITM2B-203ENST00000463839 PRPF40AO75400 957 aaKnown RBP6.68□□□□□ -1.34
ITM2B-203ENST00000463839 PSMD2Q13200 908 aa6.68□□□□□ -1.34
ITM2B-203ENST00000463839 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.68□□□□□ -1.34
ITM2B-203ENST00000463839 KIRREL1Q96J84 757 aa6.68□□□□□ -1.34
ITM2B-203ENST00000463839 ZC3H12CQ9C0D7 883 aaKnown RBP6.68□□□□□ -1.34
ITM2B-203ENST00000463839 NIF3L1Q9GZT8 377 aa6.68□□□□□ -1.34
ITM2B-203ENST00000463839 NPHS2Q9NP85 383 aa6.68□□□□□ -1.34
ITM2B-203ENST00000463839 C19orf73Q9NVV2 129 aa6.68□□□□□ -1.34
ITM2B-203ENST00000463839 SORBS3O60504 671 aa6.67□□□□□ -1.34
ITM2B-203ENST00000463839 CPNE3O75131 537 aaKnown RBP6.67□□□□□ -1.34
ITM2B-203ENST00000463839 BUD31P41223 144 aaPredicted RBP6.67□□□□□ -1.34
ITM2B-203ENST00000463839 RAD51AP2Q09MP3 1159 aa6.67□□□□□ -1.34
ITM2B-203ENST00000463839 CYFIP1Q7L576 1253 aa6.67□□□□□ -1.34
ITM2B-203ENST00000463839 NT5DC4Q86YG4 428 aa6.67□□□□□ -1.34
ITM2B-203ENST00000463839 FBXO15Q8NCQ5 510 aaPredicted RBP6.67□□□□□ -1.34
ITM2B-203ENST00000463839 DMRTB1Q96MA1 342 aa6.67□□□□□ -1.34
ITM2B-203ENST00000463839 CD320Q9NPF0 282 aa6.67□□□□□ -1.34
ITM2B-203ENST00000463839 CACNA2D2Q9NY47 1150 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms