RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 FANCBQ8NB91 859 aa14.91□□□□□ -0.02
VAPB-203ENST00000463370 DYNLL2Q96FJ2 89 aa14.91□□□□□ -0.02
VAPB-203ENST00000463370 ZNF396Q96N95 335 aaPredicted RBP14.91□□□□□ -0.02
VAPB-203ENST00000463370 MTA3Q9BTC8 594 aa14.91□□□□□ -0.02
VAPB-203ENST00000463370 GOLPH3LQ9H4A5 285 aa14.91□□□□□ -0.02
VAPB-203ENST00000463370 MAST2Q6P0Q8 1798 aa14.91□□□□□ -0.02
VAPB-203ENST00000463370 MROH7-TTC4A0A0A0MT08 1334 aa14.91□□□□□ -0.02
VAPB-203ENST00000463370 SBK1Q52WX2 424 aa14.91□□□□□ -0.02
VAPB-203ENST00000463370 MFSD14BQ5SR56 506 aa14.91□□□□□ -0.02
VAPB-203ENST00000463370 MYSM1Q5VVJ2 828 aa14.91□□□□□ -0.02
VAPB-203ENST00000463370 TGFBRAP1Q8WUH2 860 aa14.91□□□□□ -0.02
VAPB-203ENST00000463370 ARPP21Q9UBL0 812 aaPredicted RBP14.91□□□□□ -0.02
VAPB-203ENST00000463370 USP5P45974 858 aa14.9□□□□□ -0.02
VAPB-203ENST00000463370 SSRP1Q08945 709 aaKnown RBP14.9□□□□□ -0.02
VAPB-203ENST00000463370 TMTC2Q8N394 836 aa14.9□□□□□ -0.02
VAPB-203ENST00000463370 NUP62CLQ9H1M0 184 aa14.9□□□□□ -0.02
VAPB-203ENST00000463370 RTEL1Q9NZ71 1219 aa14.9□□□□□ -0.02
VAPB-203ENST00000463370 PARP3Q9Y6F1 533 aa14.9□□□□□ -0.02
VAPB-203ENST00000463370 LTBP1Q14766 1721 aa14.9□□□□□ -0.02
VAPB-203ENST00000463370 ORC4O43929 436 aa14.9□□□□□ -0.02
VAPB-203ENST00000463370 LETM1O95202 739 aaPredicted RBP14.9□□□□□ -0.02
VAPB-203ENST00000463370 NPR1P16066 1061 aa14.9□□□□□ -0.02
VAPB-203ENST00000463370 IFIT1BQ5T764 474 aaKnown RBP14.9□□□□□ -0.02
VAPB-203ENST00000463370 CKAP2LQ8IYA6 745 aa14.9□□□□□ -0.02
VAPB-203ENST00000463370 CRACR2BQ8N4Y2 399 aaPredicted RBP14.9□□□□□ -0.02
VAPB-203ENST00000463370 PPP1R9BQ96SB3 815 aa14.9□□□□□ -0.02
VAPB-203ENST00000463370 STK36Q9NRP7 1315 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 BTDP43251 543 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 PPP4CP60510 307 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 GSTO1P78417 241 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 EZH2Q15910 746 aaKnown RBP14.89□□□□□ -0.03
VAPB-203ENST00000463370 C12orf60Q5U649 245 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 ATL3Q6DD88 541 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 TMED8Q6PL24 325 aaPredicted RBP14.89□□□□□ -0.03
VAPB-203ENST00000463370 MAPKAPK5Q8IW41 473 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 LINC00301Q8NCQ3 95 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 SHISA4Q96DD7 197 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 SAP30BPQ9UHR5 308 aaKnown RBP14.89□□□□□ -0.03
VAPB-203ENST00000463370 NRXN2Q9P2S2 1712 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 ME1P48163 572 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 PLCD1P51178 756 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 GTF2IP78347 998 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 TROAPQ12815 778 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 BRAPQ7Z569 592 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 IQCA1Q86XH1 822 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 CCAR1Q8IX12 1150 aaKnown RBP14.89□□□□□ -0.03
VAPB-203ENST00000463370 SLC44A5Q8NCS7 719 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 MXD3Q9BW11 206 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 PCDHA7Q9UN72 937 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 KCNJ14Q9UNX9 436 aa14.89□□□□□ -0.03
VAPB-203ENST00000463370 LRRC37AA6NMS7 1700 aa14.88□□□□□ -0.03
VAPB-203ENST00000463370 KIAA1551Q9HCM1 1747 aa14.88□□□□□ -0.03
VAPB-203ENST00000463370 hCG_1642624A0A1W2PR95 340 aa14.88□□□□□ -0.03
VAPB-203ENST00000463370 PLEKHA8P1O95397 391 aa14.88□□□□□ -0.03
VAPB-203ENST00000463370 PCP11498 1178 aaKnown RBP14.88□□□□□ -0.03
VAPB-203ENST00000463370 EN1Q05925 392 aaPredicted RBP14.88□□□□□ -0.03
VAPB-203ENST00000463370 CCDC173Q0VFZ6 552 aa14.88□□□□□ -0.03
VAPB-203ENST00000463370 DOK7Q18PE1 504 aa14.88□□□□□ -0.03
VAPB-203ENST00000463370 FLAD1Q8NFF5 587 aa14.88□□□□□ -0.03
VAPB-203ENST00000463370 CLSTN2Q9H4D0 955 aa14.88□□□□□ -0.03
VAPB-203ENST00000463370 BAG3O95817 575 aa14.88□□□□□ -0.03
VAPB-203ENST00000463370 SNW1Q13573 536 aaKnown RBP14.88□□□□□ -0.03
VAPB-203ENST00000463370 TMC4Q7Z404 712 aa14.88□□□□□ -0.03
VAPB-203ENST00000463370 POLR3EQ9NVU0 708 aa14.88□□□□□ -0.03
VAPB-203ENST00000463370 GPR75-ASB3A0A0A6YYF3 556 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 HMGB2P26583 209 aaKnown RBP14.87□□□□□ -0.03
VAPB-203ENST00000463370 PDE6BP35913 854 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 RCAN1P53805 252 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 FUT2Q10981 343 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 MAP3K11Q16584 847 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 RCSD1Q6JBY9 416 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 MPNDQ8N594 471 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 CERS5Q8N5B7 392 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 TNMDQ9H2S6 317 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 DDX19AQ9NUU7 478 aaKnown RBP14.87□□□□□ -0.03
VAPB-203ENST00000463370 TNS1Q9HBL0 1735 aaKnown RBP14.87□□□□□ -0.03
VAPB-203ENST00000463370 TSPY2A6NKD2 308 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 F8W031 263 aaPredicted RBP14.87□□□□□ -0.03
VAPB-203ENST00000463370 RHBDL3P58872 404 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 PDE4BQ07343 736 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 DPP8Q6V1X1 898 aaPredicted RBP14.87□□□□□ -0.03
VAPB-203ENST00000463370 CATIPQ7Z7H3 387 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 FBXW7Q969H0 707 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 ZNF622Q969S3 477 aaKnown RBP eCLIP14.87□□□□□ -0.031e-11■□□□□ 9.6
VAPB-203ENST00000463370 MASTLQ96GX5 879 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.87□□□□□ -0.03
VAPB-203ENST00000463370 IL17RBQ9NRM6 502 aa14.87□□□□□ -0.03
VAPB-203ENST00000463370 COL11A2P13942 1736 aaPredicted RBP14.86□□□□□ -0.03
VAPB-203ENST00000463370 FAM205AQ6ZU69 1335 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 CCDC196A0A1B0GTZ2 297 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 BTBD18B2RXH4 712 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 LDHCP07864 332 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 SLC3A2P08195 630 aaKnown RBP14.86□□□□□ -0.03
VAPB-203ENST00000463370 U2AF2P26368 475 aaKnown RBP eCLIP14.86□□□□□ -0.033e-6■□□□□ 9.1
VAPB-203ENST00000463370 STK38Q15208 465 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 ANO1Q5XXA6 986 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 TRIM22Q8IYM9 498 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 ENGASEQ8NFI3 743 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 PDLIM2Q96JY6 352 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 RRAGDQ9NQL2 400 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms