RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 PNMA3Q9UL41 463 aa25.65■■□□□ 1.7
CPSF7-209ENST00000463244 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.65■■□□□ 1.7
CPSF7-209ENST00000463244 COL2A1P02458 1487 aaPredicted RBP25.65■■□□□ 1.7
CPSF7-209ENST00000463244 FAM196BA6NMK8 535 aa25.64■■□□□ 1.7
CPSF7-209ENST00000463244 MAP4K4O95819 1239 aaPredicted RBP25.64■■□□□ 1.7
CPSF7-209ENST00000463244 NSUN4Q96CB9 384 aaKnown RBP25.64■■□□□ 1.7
CPSF7-209ENST00000463244 DEFB118Q96PH6 123 aa25.64■■□□□ 1.7
CPSF7-209ENST00000463244 HMG20BQ9P0W2 317 aa25.64■■□□□ 1.7
CPSF7-209ENST00000463244 GNAI3P08754 354 aa25.63■■□□□ 1.69
CPSF7-209ENST00000463244 NEUROD6Q96NK8 337 aa25.63■■□□□ 1.69
CPSF7-209ENST00000463244 A0A0C4DFX4 3053 aa25.62■■□□□ 1.69
CPSF7-209ENST00000463244 TFRCP02786 760 aaKnown RBP25.62■■□□□ 1.69
CPSF7-209ENST00000463244 LDHCP07864 332 aa25.62■■□□□ 1.69
CPSF7-209ENST00000463244 RARSP54136 660 aaKnown RBP25.62■■□□□ 1.69
CPSF7-209ENST00000463244 GSTO1P78417 241 aa25.62■■□□□ 1.69
CPSF7-209ENST00000463244 SPP2Q13103 211 aa25.62■■□□□ 1.69
CPSF7-209ENST00000463244 PI16Q6UXB8 463 aa25.62■■□□□ 1.69
CPSF7-209ENST00000463244 SPATA5Q8NB90 893 aa25.62■■□□□ 1.69
CPSF7-209ENST00000463244 ZNF280CQ8ND82 737 aa25.62■■□□□ 1.69
CPSF7-209ENST00000463244 ARHGAP45Q92619 1136 aa25.62■■□□□ 1.69
CPSF7-209ENST00000463244 CRISPLD2Q9H0B8 497 aa25.62■■□□□ 1.69
CPSF7-209ENST00000463244 TAOK2Q9UL54 1235 aa25.62■■□□□ 1.69
CPSF7-209ENST00000463244 ALPK3Q96L96 1907 aa25.61■■□□□ 1.69
CPSF7-209ENST00000463244 TBC1D9Q6ZT07 1266 aa25.61■■□□□ 1.69
CPSF7-209ENST00000463244 TBC1D2Q9BYX2 928 aa25.61■■□□□ 1.69
CPSF7-209ENST00000463244 EVI5O60447 810 aa25.6■■□□□ 1.69
CPSF7-209ENST00000463244 ARID4AP29374 1257 aaPredicted RBP25.6■■□□□ 1.69
CPSF7-209ENST00000463244 GCLCP48506 637 aaPredicted RBP25.6■■□□□ 1.69
CPSF7-209ENST00000463244 CAP2P40123 477 aa25.59■■□□□ 1.69
CPSF7-209ENST00000463244 HMGCS2P54868 508 aa25.59■■□□□ 1.69
CPSF7-209ENST00000463244 RRP1BQ14684 758 aaKnown RBP25.59■■□□□ 1.69
CPSF7-209ENST00000463244 RAI14Q9P0K7 980 aa25.59■■□□□ 1.69
CPSF7-209ENST00000463244 PABPC4Q13310 644 aaKnown RBP eCLIP25.58■■□□□ 1.69
CPSF7-209ENST00000463244 GORABQ5T7V8 394 aa25.58■■□□□ 1.69
CPSF7-209ENST00000463244 SIPA1L1O43166 1804 aa25.58■■□□□ 1.68
CPSF7-209ENST00000463244 A0A1W2PPC1 479 aa25.57■■□□□ 1.68
CPSF7-209ENST00000463244 MCAMP43121 646 aa25.57■■□□□ 1.68
CPSF7-209ENST00000463244 TEX11Q8IYF3 940 aa25.57■■□□□ 1.68
CPSF7-209ENST00000463244 PAWRQ96IZ0 340 aaKnown RBP25.57■■□□□ 1.68
CPSF7-209ENST00000463244 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.57■■□□□ 1.682e-10■■■□□ 17.7
CPSF7-209ENST00000463244 ASCC2Q9H1I8 757 aaPredicted RBP25.57■■□□□ 1.68
CPSF7-209ENST00000463244 HERC5Q9UII4 1024 aaKnown RBP25.57■■□□□ 1.68
CPSF7-209ENST00000463244 USP17L5A8MUK1 530 aa25.56■■□□□ 1.68
CPSF7-209ENST00000463244 HMGCRP04035 888 aa25.56■■□□□ 1.68
CPSF7-209ENST00000463244 SH3D19Q5HYK7 790 aa25.56■■□□□ 1.68
CPSF7-209ENST00000463244 GJD2Q9UKL4 321 aa25.56■■□□□ 1.68
CPSF7-209ENST00000463244 PLXNB2O15031 1838 aa25.55■■□□□ 1.68
CPSF7-209ENST00000463244 CDK5RAP2Q96SN8 1893 aa25.54■■□□□ 1.68
CPSF7-209ENST00000463244 NECAB2Q7Z6G3 386 aa25.54■■□□□ 1.68
CPSF7-209ENST00000463244 SH3RF3Q8TEJ3 882 aaPredicted RBP25.54■■□□□ 1.68
CPSF7-209ENST00000463244 DIS3LQ8TF46 1054 aaKnown RBP25.54■■□□□ 1.68
CPSF7-209ENST00000463244 AS3MTQ9HBK9 375 aa25.54■■□□□ 1.68
CPSF7-209ENST00000463244 LRP2BPQ9P2M1 347 aa25.54■■□□□ 1.68
CPSF7-209ENST00000463244 PI4KBQ9UBF8 816 aa25.54■■□□□ 1.68
CPSF7-209ENST00000463244 MAST2Q6P0Q8 1798 aa25.54■■□□□ 1.68
CPSF7-209ENST00000463244 PNMA6EA0A0J9YXQ4 647 aa25.53■■□□□ 1.68
CPSF7-209ENST00000463244 GNAI2P04899 355 aa25.53■■□□□ 1.68
CPSF7-209ENST00000463244 UQCRFS1P1P0C7P4 283 aa25.53■■□□□ 1.68
CPSF7-209ENST00000463244 ANKLE1Q8NAG6 615 aa25.53■■□□□ 1.68
CPSF7-209ENST00000463244 FOCADQ5VW36 1801 aa25.52■■□□□ 1.68
CPSF7-209ENST00000463244 G3BP1Q13283 466 aaKnown RBP eCLIP25.52■■□□□ 1.68
CPSF7-209ENST00000463244 WDR18Q9BV38 432 aa25.52■■□□□ 1.68
CPSF7-209ENST00000463244 DHX36Q9H2U1 1008 aaKnown RBP25.52■■□□□ 1.68
CPSF7-209ENST00000463244 MORF4L1Q9UBU8 362 aa25.52■■□□□ 1.68
CPSF7-209ENST00000463244 RPTORQ8N122 1335 aa25.52■■□□□ 1.68
CPSF7-209ENST00000463244 TRIM27P14373 513 aa25.51■■□□□ 1.67
CPSF7-209ENST00000463244 BACE1P56817 501 aa25.51■■□□□ 1.67
CPSF7-209ENST00000463244 NOL10Q9BSC4 688 aaKnown RBP25.51■■□□□ 1.67
CPSF7-209ENST00000463244 AATFQ9NY61 560 aaKnown RBP eCLIP25.51■■□□□ 1.67
CPSF7-209ENST00000463244 STAP2Q9UGK3 403 aa25.51■■□□□ 1.67
CPSF7-209ENST00000463244 SOX1O00570 391 aaPredicted RBP25.5■■□□□ 1.67
CPSF7-209ENST00000463244 ASNSP08243 561 aa25.5■■□□□ 1.67
CPSF7-209ENST00000463244 TRIM32Q13049 653 aa25.5■■□□□ 1.67
CPSF7-209ENST00000463244 MTMR2Q13614 643 aa25.5■■□□□ 1.67
CPSF7-209ENST00000463244 HMX1Q9NP08 348 aaPredicted RBP25.5■■□□□ 1.67
CPSF7-209ENST00000463244 DNAH12Q6ZR08 3092 aa25.5■■□□□ 1.67
CPSF7-209ENST00000463244 MYO5AQ9Y4I1 1855 aaKnown RBP25.49■■□□□ 1.67
CPSF7-209ENST00000463244 DDX60LQ5H9U9 1706 aaKnown RBP25.49■■□□□ 1.67
CPSF7-209ENST00000463244 IPO8O15397 1037 aaKnown RBP25.49■■□□□ 1.67
CPSF7-209ENST00000463244 BAG3O95817 575 aa25.49■■□□□ 1.67
CPSF7-209ENST00000463244 PLCG2P16885 1265 aa25.49■■□□□ 1.67
CPSF7-209ENST00000463244 HOXA7P31268 230 aaPredicted RBP25.49■■□□□ 1.67
CPSF7-209ENST00000463244 PPP4CP60510 307 aa25.49■■□□□ 1.67
CPSF7-209ENST00000463244 IRX3P78415 501 aaPredicted RBP25.49■■□□□ 1.67
CPSF7-209ENST00000463244 NAA16Q6N069 864 aaPredicted RBP25.49■■□□□ 1.67
CPSF7-209ENST00000463244 METTL16Q86W50 562 aaKnown RBP25.49■■□□□ 1.67
CPSF7-209ENST00000463244 DNAJC18Q9H819 358 aa25.49■■□□□ 1.67
CPSF7-209ENST00000463244 TNNQ9UQP3 1299 aa25.49■■□□□ 1.67
CPSF7-209ENST00000463244 FLT1P17948 1338 aa25.48■■□□□ 1.67
CPSF7-209ENST00000463244 MNX1P50219 401 aaPredicted RBP25.48■■□□□ 1.67
CPSF7-209ENST00000463244 JAG1P78504 1218 aa25.48■■□□□ 1.67
CPSF7-209ENST00000463244 ATF7IPQ6VMQ6 1270 aa25.48■■□□□ 1.67
CPSF7-209ENST00000463244 TRIB2Q92519 343 aa25.48■■□□□ 1.67
CPSF7-209ENST00000463244 SNRKQ9NRH2 765 aa25.48■■□□□ 1.67
CPSF7-209ENST00000463244 TMOD4Q9NZQ9 345 aa25.48■■□□□ 1.67
CPSF7-209ENST00000463244 ADGRA1Q86SQ6 560 aa25.47■■□□□ 1.67
CPSF7-209ENST00000463244 MAPKAPK5Q8IW41 473 aa25.47■■□□□ 1.67
CPSF7-209ENST00000463244 TGFBRAP1Q8WUH2 860 aa25.47■■□□□ 1.67
CPSF7-209ENST00000463244 P2RX7Q99572 595 aaKnown RBP25.47■■□□□ 1.67
CPSF7-209ENST00000463244 GDF15Q99988 308 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms