RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 BRI3BPQ8WY22 251 aa22.79■■□□□ 1.24
COL9A3-203ENST00000462700 SAP30BPQ9UHR5 308 aaKnown RBP22.79■■□□□ 1.24
COL9A3-203ENST00000462700 PALD1Q9ULE6 856 aa22.79■■□□□ 1.24
COL9A3-203ENST00000462700 ERC2O15083 957 aa22.78■■□□□ 1.24
COL9A3-203ENST00000462700 IGHDP01880 384 aa22.78■■□□□ 1.24
COL9A3-203ENST00000462700 CHGBP05060 677 aa22.78■■□□□ 1.24
COL9A3-203ENST00000462700 SNAPC2Q13487 334 aa22.78■■□□□ 1.24
COL9A3-203ENST00000462700 UBE3CQ15386 1083 aa22.78■■□□□ 1.24
COL9A3-203ENST00000462700 OTUD7BQ6GQQ9 843 aa22.78■■□□□ 1.24
COL9A3-203ENST00000462700 ZSCAN25Q6NSZ9 544 aa22.78■■□□□ 1.24
COL9A3-203ENST00000462700 SMC5Q8IY18 1101 aa22.78■■□□□ 1.24
COL9A3-203ENST00000462700 PICK1Q9NRD5 415 aa22.78■■□□□ 1.24
COL9A3-203ENST00000462700 GLRX3O76003 335 aaKnown RBP22.77■■□□□ 1.24
COL9A3-203ENST00000462700 HLA-DOAP06340 250 aa22.77■■□□□ 1.24
COL9A3-203ENST00000462700 IRX6P78412 446 aaPredicted RBP22.77■■□□□ 1.24
COL9A3-203ENST00000462700 METTL16Q86W50 562 aaKnown RBP22.77■■□□□ 1.24
COL9A3-203ENST00000462700 LCORLQ8N3X6 602 aa22.77■■□□□ 1.24
COL9A3-203ENST00000462700 KBTBD3Q8NAB2 608 aa22.77■■□□□ 1.24
COL9A3-203ENST00000462700 CRNKL1Q9BZJ0 848 aaKnown RBP22.77■■□□□ 1.24
COL9A3-203ENST00000462700 KCNH4Q9UQ05 1017 aa22.77■■□□□ 1.24
COL9A3-203ENST00000462700 SIPA1L1O43166 1804 aa22.77■■□□□ 1.24
COL9A3-203ENST00000462700 CETPP11597 493 aa22.76■■□□□ 1.23
COL9A3-203ENST00000462700 PTPRAP18433 802 aa22.76■■□□□ 1.23
COL9A3-203ENST00000462700 FOXP4Q8IVH2 680 aaPredicted RBP22.76■■□□□ 1.23
COL9A3-203ENST00000462700 DNAJC18Q9H819 358 aa22.76■■□□□ 1.23
COL9A3-203ENST00000462700 ARMT1Q9H993 441 aa22.76■■□□□ 1.23
COL9A3-203ENST00000462700 MBD4O95243 580 aa22.75■■□□□ 1.23
COL9A3-203ENST00000462700 SLC4A8Q2Y0W8 1093 aa22.75■■□□□ 1.23
COL9A3-203ENST00000462700 NOM1Q5C9Z4 860 aaKnown RBP22.75■■□□□ 1.23
COL9A3-203ENST00000462700 CRACR2BQ8N4Y2 399 aaPredicted RBP22.75■■□□□ 1.23
COL9A3-203ENST00000462700 R3HDMLQ9H3Y0 253 aa22.75■■□□□ 1.23
COL9A3-203ENST00000462700 RRP1BQ14684 758 aaKnown RBP22.74■■□□□ 1.23
COL9A3-203ENST00000462700 FAM43AQ8N2R8 423 aa22.74■■□□□ 1.23
COL9A3-203ENST00000462700 TRIM34Q9BYJ4 488 aa22.74■■□□□ 1.23
COL9A3-203ENST00000462700 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.74■■□□□ 1.23
COL9A3-203ENST00000462700 ZHX2Q9Y6X8 837 aa22.74■■□□□ 1.23
COL9A3-203ENST00000462700 DOCK1Q14185 1865 aa22.74■■□□□ 1.23
COL9A3-203ENST00000462700 DDX60LQ5H9U9 1706 aaKnown RBP22.74■■□□□ 1.23
COL9A3-203ENST00000462700 GPR25O00155 361 aa22.73■■□□□ 1.23
COL9A3-203ENST00000462700 CXCL11O14625 94 aa22.73■■□□□ 1.23
COL9A3-203ENST00000462700 CAP2P40123 477 aa22.73■■□□□ 1.23
COL9A3-203ENST00000462700 SDR42E1Q8WUS8 393 aa22.73■■□□□ 1.23
COL9A3-203ENST00000462700 LNPKQ9C0E8 428 aa22.73■■□□□ 1.23
COL9A3-203ENST00000462700 STAP2Q9UGK3 403 aa22.73■■□□□ 1.23
COL9A3-203ENST00000462700 BTBD19C9JJ37 291 aa22.72■■□□□ 1.23
COL9A3-203ENST00000462700 CRHR2Q13324 411 aa22.72■■□□□ 1.23
COL9A3-203ENST00000462700 B4GALNT3Q6L9W6 998 aa22.72■■□□□ 1.23
COL9A3-203ENST00000462700 TTC6Q86TZ1 520 aa22.72■■□□□ 1.23
COL9A3-203ENST00000462700 ZNF296Q8WUU4 475 aaPredicted RBP22.72■■□□□ 1.23
COL9A3-203ENST00000462700 PUS7LQ9H0K6 701 aaKnown RBP22.72■■□□□ 1.23
COL9A3-203ENST00000462700 EHD4Q9H223 541 aa22.72■■□□□ 1.23
COL9A3-203ENST00000462700 DCP1AQ9NPI6 582 aaPredicted RBP22.72■■□□□ 1.23
COL9A3-203ENST00000462700 AFG3L2Q9Y4W6 797 aa22.72■■□□□ 1.23
COL9A3-203ENST00000462700 PDE1AP54750 535 aa22.71■■□□□ 1.23
COL9A3-203ENST00000462700 CCDC84Q86UT8 332 aaPredicted RBP22.71■■□□□ 1.23
COL9A3-203ENST00000462700 ZCCHC17Q9NP64 241 aaKnown RBP22.71■■□□□ 1.23
COL9A3-203ENST00000462700 NAV1Q8NEY1 1877 aa22.71■■□□□ 1.23
COL9A3-203ENST00000462700 MYH7P12883 1935 aa22.7■■□□□ 1.23
COL9A3-203ENST00000462700 RNF113AO15541 343 aaKnown RBP22.7■■□□□ 1.22
COL9A3-203ENST00000462700 PRKAB2O43741 272 aa22.7■■□□□ 1.22
COL9A3-203ENST00000462700 POLR3DP05423 398 aaPredicted RBP22.7■■□□□ 1.22
COL9A3-203ENST00000462700 ZFYP08048 801 aaPredicted RBP22.7■■□□□ 1.22
COL9A3-203ENST00000462700 PLCD1P51178 756 aa22.7■■□□□ 1.22
COL9A3-203ENST00000462700 NUCB1Q02818 461 aa22.7■■□□□ 1.22
COL9A3-203ENST00000462700 MOGSQ13724 837 aa22.7■■□□□ 1.22
COL9A3-203ENST00000462700 TAF1CQ15572 869 aaPredicted RBP22.7■■□□□ 1.22
COL9A3-203ENST00000462700 APPBP2Q92624 585 aa22.7■■□□□ 1.22
COL9A3-203ENST00000462700 MCM9Q9NXL9 1143 aa22.7■■□□□ 1.22
COL9A3-203ENST00000462700 SERPINB13Q9UIV8 391 aa22.7■■□□□ 1.22
COL9A3-203ENST00000462700 MYH1P12882 1939 aa22.69■■□□□ 1.22
COL9A3-203ENST00000462700 A0A0G2JLL6 359 aaPredicted RBP22.69■■□□□ 1.22
COL9A3-203ENST00000462700 PRRT2Q7Z6L0 340 aaPredicted RBP22.69■■□□□ 1.22
COL9A3-203ENST00000462700 ANKRD23Q86SG2 305 aa22.69■■□□□ 1.22
COL9A3-203ENST00000462700 CHD1LQ86WJ1 897 aa22.69■■□□□ 1.22
COL9A3-203ENST00000462700 ATP8A2Q9NTI2 1148 aa22.69■■□□□ 1.22
COL9A3-203ENST00000462700 CASP8AP2Q9UKL3 1982 aa22.69■■□□□ 1.22
COL9A3-203ENST00000462700 TRIM75PA6NK02 468 aa22.68■■□□□ 1.22
COL9A3-203ENST00000462700 FKTNO75072 461 aa22.68■■□□□ 1.22
COL9A3-203ENST00000462700 GDF11O95390 407 aa22.68■■□□□ 1.22
COL9A3-203ENST00000462700 JAG1P78504 1218 aa22.68■■□□□ 1.22
COL9A3-203ENST00000462700 LRRFIP1Q32MZ4 808 aaKnown RBP22.68■■□□□ 1.22
COL9A3-203ENST00000462700 TATDN1Q6P1N9 297 aa22.68■■□□□ 1.22
COL9A3-203ENST00000462700 OSBP2Q969R2 916 aa22.68■■□□□ 1.22
COL9A3-203ENST00000462700 FSD1Q9BTV5 496 aa22.68■■□□□ 1.22
COL9A3-203ENST00000462700 TBC1D2Q9BYX2 928 aa22.68■■□□□ 1.22
COL9A3-203ENST00000462700 ZFYVE28Q9HCC9 887 aa22.68■■□□□ 1.22
COL9A3-203ENST00000462700 PHIPQ8WWQ0 1821 aa22.67■■□□□ 1.22
COL9A3-203ENST00000462700 USP17L5A8MUK1 530 aa22.67■■□□□ 1.22
COL9A3-203ENST00000462700 ASNSP08243 561 aa22.67■■□□□ 1.22
COL9A3-203ENST00000462700 DGKZQ13574 1117 aa22.67■■□□□ 1.22
COL9A3-203ENST00000462700 IFFO2Q5TF58 517 aa22.67■■□□□ 1.22
COL9A3-203ENST00000462700 GINM1Q9NU53 330 aa22.67■■□□□ 1.22
COL9A3-203ENST00000462700 SLC4A4Q9Y6R1 1079 aa22.67■■□□□ 1.22
COL9A3-203ENST00000462700 EVX2Q03828 476 aa22.66■■□□□ 1.22
COL9A3-203ENST00000462700 GABPAQ06546 454 aa22.66■■□□□ 1.22
COL9A3-203ENST00000462700 SHROOM1Q2M3G4 852 aaPredicted RBP22.66■■□□□ 1.22
COL9A3-203ENST00000462700 GPAT2Q6NUI2 795 aa22.66■■□□□ 1.22
COL9A3-203ENST00000462700 FASTKD5Q7L8L6 764 aaKnown RBP22.66■■□□□ 1.22
COL9A3-203ENST00000462700 ZNF280CQ8ND82 737 aa22.66■■□□□ 1.22
COL9A3-203ENST00000462700 STRBPQ96SI9 672 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms