RNA–Protein interactions for RNA: ENST00000462317.5

MUC1-214, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 3

Gene MUC1, Length 1,112 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-214	ENST00000462317	ZNF280C	Q8ND82	737 aa		18.35	■□□□□ 0.53
MUC1-214	ENST00000462317	DIS3L	Q8TF46	1054 aa	Known RBP	18.35	■□□□□ 0.53
MUC1-214	ENST00000462317	PNMA3	Q9UL41	463 aa		18.35	■□□□□ 0.53
MUC1-214	ENST00000462317	SOX1	O00570	391 aa	Predicted RBP	18.34	■□□□□ 0.53
MUC1-214	ENST00000462317	CT47B1	P0C2W7	299 aa	Predicted RBP	18.34	■□□□□ 0.53
MUC1-214	ENST00000462317	HMGCS2	P54868	508 aa		18.34	■□□□□ 0.53
MUC1-214	ENST00000462317	GORAB	Q5T7V8	394 aa		18.34	■□□□□ 0.53
MUC1-214	ENST00000462317	CRISPLD2	Q9H0B8	497 aa		18.34	■□□□□ 0.53
MUC1-214	ENST00000462317	RAI14	Q9P0K7	980 aa		18.34	■□□□□ 0.53
MUC1-214	ENST00000462317	LDHC	P07864	332 aa		18.33	■□□□□ 0.52
MUC1-214	ENST00000462317	TRIM32	Q13049	653 aa		18.33	■□□□□ 0.52
MUC1-214	ENST00000462317	FAM110C	Q1W6H9	321 aa		18.33	■□□□□ 0.52
MUC1-214	ENST00000462317	NECAB2	Q7Z6G3	386 aa		18.33	■□□□□ 0.52
MUC1-214	ENST00000462317	SPATA5	Q8NB90	893 aa		18.33	■□□□□ 0.52
MUC1-214	ENST00000462317	PROCA1	Q8NCQ7	364 aa	Predicted RBP	18.33	■□□□□ 0.52
MUC1-214	ENST00000462317	NSUN4	Q96CB9	384 aa	Known RBP	18.33	■□□□□ 0.52
MUC1-214	ENST00000462317	LRCH3	Q96II8	777 aa		18.33	■□□□□ 0.52
MUC1-214	ENST00000462317	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	18.33	■□□□□ 0.52
MUC1-214	ENST00000462317	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.33	■□□□□ 0.52
MUC1-214	ENST00000462317	ASCC2	Q9H1I8	757 aa	Predicted RBP	18.33	■□□□□ 0.52
MUC1-214	ENST00000462317	NPM3	O75607	178 aa	Known RBP	18.32	■□□□□ 0.52
MUC1-214	ENST00000462317	CAP2	P40123	477 aa		18.32	■□□□□ 0.52
MUC1-214	ENST00000462317	GCLC	P48506	637 aa	Predicted RBP	18.32	■□□□□ 0.52
MUC1-214	ENST00000462317	GSTO1	P78417	241 aa		18.32	■□□□□ 0.52
MUC1-214	ENST00000462317	GJD2	Q9UKL4	321 aa		18.32	■□□□□ 0.52
MUC1-214	ENST00000462317	USP17L5	A8MUK1	530 aa		18.31	■□□□□ 0.52
MUC1-214	ENST00000462317	PEX10	O60683	326 aa		18.31	■□□□□ 0.52
MUC1-214	ENST00000462317	TEX11	Q8IYF3	940 aa		18.31	■□□□□ 0.52
MUC1-214	ENST00000462317	SLC17A8	Q8NDX2	589 aa		18.31	■□□□□ 0.52
MUC1-214	ENST00000462317	MYH13	Q9UKX3	1938 aa		18.3	■□□□□ 0.52
MUC1-214	ENST00000462317	HMGCR	P04035	888 aa		18.3	■□□□□ 0.52
MUC1-214	ENST00000462317	GNAI3	P08754	354 aa		18.3	■□□□□ 0.52
MUC1-214	ENST00000462317	CAPN2	P17655	700 aa		18.3	■□□□□ 0.52
MUC1-214	ENST00000462317	PABPC4	Q13310	644 aa	Known RBP eCLIP	18.3	■□□□□ 0.52	7e-9	■■■□□ 14.9
MUC1-214	ENST00000462317	C7orf61	Q8IZ16	206 aa		18.3	■□□□□ 0.52
MUC1-214	ENST00000462317	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.3	■□□□□ 0.52
MUC1-214	ENST00000462317	HMX1	Q9NP08	348 aa	Predicted RBP	18.3	■□□□□ 0.52
MUC1-214	ENST00000462317	LRP2BP	Q9P2M1	347 aa		18.3	■□□□□ 0.52
MUC1-214	ENST00000462317	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.3	■□□□□ 0.52
MUC1-214	ENST00000462317		A0A1W2PPC1	479 aa		18.29	■□□□□ 0.52
MUC1-214	ENST00000462317	RARS	P54136	660 aa	Known RBP	18.29	■□□□□ 0.52
MUC1-214	ENST00000462317	JAG1	P78504	1218 aa		18.29	■□□□□ 0.52
MUC1-214	ENST00000462317	SNRK	Q9NRH2	765 aa		18.29	■□□□□ 0.52
MUC1-214	ENST00000462317	RPTOR	Q8N122	1335 aa		18.28	■□□□□ 0.52
MUC1-214	ENST00000462317	MYH2	Q9UKX2	1941 aa		18.28	■□□□□ 0.52
MUC1-214	ENST00000462317	MAP4K4	O95819	1239 aa	Predicted RBP	18.28	■□□□□ 0.52
MUC1-214	ENST00000462317	CYP2B6	P20813	491 aa		18.28	■□□□□ 0.52
MUC1-214	ENST00000462317	MCAM	P43121	646 aa		18.28	■□□□□ 0.52
MUC1-214	ENST00000462317	MTX1	Q13505	466 aa		18.28	■□□□□ 0.52
MUC1-214	ENST00000462317	MTMR2	Q13614	643 aa		18.28	■□□□□ 0.52
MUC1-214	ENST00000462317	SH3D19	Q5HYK7	790 aa		18.28	■□□□□ 0.52
MUC1-214	ENST00000462317	P2RX7	Q99572	595 aa	Known RBP	18.28	■□□□□ 0.52
MUC1-214	ENST00000462317	AS3MT	Q9HBK9	375 aa		18.28	■□□□□ 0.52
MUC1-214	ENST00000462317	SYN1	P17600	705 aa		18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	ARID4A	P29374	1257 aa	Predicted RBP	18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	MNX1	P50219	401 aa	Predicted RBP	18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	IRX3	P78415	501 aa	Predicted RBP	18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	G3BP1	Q13283	466 aa	Known RBP eCLIP	18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	SHROOM1	Q2M3G4	852 aa	Predicted RBP	18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	TRIB2	Q92519	343 aa		18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	TBC1D2	Q9BYX2	928 aa		18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	NBPF3	Q9H094	633 aa		18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	PI4KB	Q9UBF8	816 aa		18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	HERC5	Q9UII4	1024 aa	Known RBP	18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	DOCK2	Q92608	1830 aa		18.27	■□□□□ 0.52
MUC1-214	ENST00000462317	PNMA6E	A0A0J9YXQ4	647 aa		18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	DLL1	O00548	723 aa		18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	BACE1	P56817	501 aa		18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	MAPKAPK5	Q8IW41	473 aa		18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	ANKLE1	Q8NAG6	615 aa		18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	TGFBRAP1	Q8WUH2	860 aa		18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	GDF15	Q99988	308 aa		18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	NOL10	Q9BSC4	688 aa	Known RBP	18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	TXNRD2	Q9NNW7	524 aa		18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	TMOD4	Q9NZQ9	345 aa		18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	MORF4L1	Q9UBU8	362 aa		18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	TNN	Q9UQP3	1299 aa		18.26	■□□□□ 0.51
MUC1-214	ENST00000462317	MGAM	O43451	1857 aa		18.25	■□□□□ 0.51
MUC1-214	ENST00000462317	NAA16	Q6N069	864 aa	Predicted RBP	18.25	■□□□□ 0.51
MUC1-214	ENST00000462317	ARHGAP45	Q92619	1136 aa		18.25	■□□□□ 0.51
MUC1-214	ENST00000462317	WDR18	Q9BV38	432 aa		18.25	■□□□□ 0.51
MUC1-214	ENST00000462317	C11orf49	Q9H6J7	331 aa		18.25	■□□□□ 0.51
MUC1-214	ENST00000462317	GDF11	O95390	407 aa		18.24	■□□□□ 0.51
MUC1-214	ENST00000462317	BAG3	O95817	575 aa		18.24	■□□□□ 0.51
MUC1-214	ENST00000462317	GNAI2	P04899	355 aa		18.24	■□□□□ 0.51
MUC1-214	ENST00000462317	UQCRFS1P1	P0C7P4	283 aa		18.24	■□□□□ 0.51
MUC1-214	ENST00000462317	PRKAR2A	P13861	404 aa	Known RBP	18.24	■□□□□ 0.51
MUC1-214	ENST00000462317	ADGRA1	Q86SQ6	560 aa		18.24	■□□□□ 0.51
MUC1-214	ENST00000462317	GPRC5A	Q8NFJ5	357 aa		18.24	■□□□□ 0.51
MUC1-214	ENST00000462317	DHX36	Q9H2U1	1008 aa	Known RBP	18.24	■□□□□ 0.51
MUC1-214	ENST00000462317	DNAJC18	Q9H819	358 aa		18.24	■□□□□ 0.51
MUC1-214	ENST00000462317	PALD1	Q9ULE6	856 aa		18.24	■□□□□ 0.51
MUC1-214	ENST00000462317	DOCK1	Q14185	1865 aa		18.24	■□□□□ 0.51
MUC1-214	ENST00000462317	ASNS	P08243	561 aa		18.23	■□□□□ 0.51
MUC1-214	ENST00000462317	HOXA7	P31268	230 aa	Predicted RBP	18.23	■□□□□ 0.51
MUC1-214	ENST00000462317	BMP8B	P34820	402 aa		18.23	■□□□□ 0.51
MUC1-214	ENST00000462317	HERVK_113	P62684	666 aa		18.23	■□□□□ 0.51
MUC1-214	ENST00000462317		Q3C1V9	767 aa		18.23	■□□□□ 0.51
MUC1-214	ENST00000462317	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	18.23	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms