RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 TFR2Q9UP52 801 aa9.15□□□□□ -0.94
ERCC8-204ENST00000462279 HPSEQ9Y251 543 aa9.15□□□□□ -0.94
ERCC8-204ENST00000462279 CDHR2Q9BYE9 1310 aa9.15□□□□□ -0.94
ERCC8-204ENST00000462279 ABCC6O95255 1503 aa9.15□□□□□ -0.95
ERCC8-204ENST00000462279 CPP00450 1065 aa9.15□□□□□ -0.95
ERCC8-204ENST00000462279 IGKV5-2P06315 115 aa9.15□□□□□ -0.95
ERCC8-204ENST00000462279 AFMP43652 599 aa9.15□□□□□ -0.95
ERCC8-204ENST00000462279 FXR1P51114 621 aaKnown RBP eCLIP9.15□□□□□ -0.95
ERCC8-204ENST00000462279 IRAK1P51617 712 aa9.15□□□□□ -0.95
ERCC8-204ENST00000462279 MRPS25P82663 173 aaKnown RBP9.15□□□□□ -0.95
ERCC8-204ENST00000462279 GRIN1Q05586 938 aa9.15□□□□□ -0.95
ERCC8-204ENST00000462279 NR1I3Q14994 352 aa9.15□□□□□ -0.95
ERCC8-204ENST00000462279 MICU3Q86XE3 530 aa9.15□□□□□ -0.95
ERCC8-204ENST00000462279 SMYD4Q8IYR2 804 aaPredicted RBP9.15□□□□□ -0.95
ERCC8-204ENST00000462279 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.15□□□□□ -0.95
ERCC8-204ENST00000462279 DDX60Q8IY21 1712 aaKnown RBP9.14□□□□□ -0.95
ERCC8-204ENST00000462279 UBE2Q2LH0YL09 131 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 MYO1FO00160 1098 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 PES1O00541 588 aaKnown RBP9.14□□□□□ -0.95
ERCC8-204ENST00000462279 PRPF6O94906 941 aaKnown RBP9.14□□□□□ -0.95
ERCC8-204ENST00000462279 ZNF18P17022 549 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 CASP1P29466 404 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 GNGT1P63211 74 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 TRIM29Q14134 588 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 MAP9Q49MG5 647 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 RESP18Q5W5W9 173 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 KCNV1Q6PIU1 500 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 GBP6Q6ZN66 633 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 NUP88Q99567 741 aaPredicted RBP9.14□□□□□ -0.95
ERCC8-204ENST00000462279 DSCC1Q9BVC3 393 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 KDM3BQ7LBC6 1761 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 USP31Q70CQ4 1352 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 PLEKHG3A1L390 1219 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 A1BGP04217 495 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 CCDC82Q8N4S0 544 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 COG1Q8WTW3 980 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 MED15Q96RN5 788 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 DACH1Q9UI36 760 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 HPS5Q9UPZ3 1129 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 MAST3O60307 1309 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 GOLGA6BA6NDN3 693 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 ATP5J2-PTCD1G3V325 749 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 MYO1BO43795 1136 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 ZEB2O60315 1214 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 PTCD1O75127 700 aaKnown RBP9.14□□□□□ -0.95
ERCC8-204ENST00000462279 HOXB7P09629 217 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 TDO2P48775 406 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 ATP2B2Q01814 1243 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 FILIP1LQ4L180 1135 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 RASGRP2Q7LDG7 609 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 ABTB2Q8N961 1025 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 MLKLQ8NB16 471 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 GIMAP7Q8NHV1 300 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 ENOX1Q8TC92 643 aaKnown RBP9.14□□□□□ -0.95
ERCC8-204ENST00000462279 MMS19Q96T76 1030 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 CAPS2Q9BXY5 557 aa9.14□□□□□ -0.95
ERCC8-204ENST00000462279 TTF2Q9UNY4 1162 aaKnown RBP9.14□□□□□ -0.95
ERCC8-204ENST00000462279 SIPA1L3O60292 1781 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-204ENST00000462279 DIP2BQ9P265 1576 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 ROBO2Q9HCK4 1378 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 MYH8P13535 1937 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 MFAP3LO75121 409 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 KIAA0754O94854 1291 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 MYBL2P10244 700 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 GSCP56915 257 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-204ENST00000462279 PTPN12Q05209 780 aaKnown RBP9.13□□□□□ -0.95
ERCC8-204ENST00000462279 IMMTQ16891 758 aaKnown RBP9.13□□□□□ -0.95
ERCC8-204ENST00000462279 MED1Q15648 1581 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-204ENST00000462279 NDUFAB1O14561 156 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 PPP6R2O75170 966 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 ECM2O94769 699 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-204ENST00000462279 TUBB4BP68371 445 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 PTPAQ15257 358 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 OTUD6BQ8N6M0 293 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 KRI1Q8N9T8 703 aaKnown RBP9.13□□□□□ -0.95
ERCC8-204ENST00000462279 MYL10Q9BUA6 226 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 SELENOOQ9BVL4 669 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 VPS16Q9H269 839 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 DONSONQ9NYP3 566 aa9.13□□□□□ -0.95
ERCC8-204ENST00000462279 A0A1B0GTH6 734 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 M0R2C6 588 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 N4BP3O15049 544 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 TUBBP07437 444 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 RDXP35241 583 aaKnown RBP9.12□□□□□ -0.95
ERCC8-204ENST00000462279 USP14P54578 494 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 TUBB2AQ13885 445 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 GCKRQ14397 625 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 MSL3Q8N5Y2 521 aaKnown RBP9.12□□□□□ -0.95
ERCC8-204ENST00000462279 ANKRD24Q8TF21 1146 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 TUBB2BQ9BVA1 445 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 NAA15Q9BXJ9 866 aaKnown RBP9.12□□□□□ -0.95
ERCC8-204ENST00000462279 HELLSQ9NRZ9 838 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 DENND2AQ9ULE3 1009 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 SH3TC1Q8TE82 1336 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 PHRF1Q9P1Y6 1649 aaKnown RBP9.12□□□□□ -0.95
ERCC8-204ENST00000462279 UBR1Q8IWV7 1749 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 NEURL1BA8MQ27 555 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 GYPCP04921 128 aa9.12□□□□□ -0.95
ERCC8-204ENST00000462279 IFIT1P09914 478 aaKnown RBP9.12□□□□□ -0.95
ERCC8-204ENST00000462279 MATR3P43243 847 aaKnown RBP eCLIP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms