RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 TSGA10IPQ3SY00 556 aa16■□□□□ 0.15
PBRM1-219ENST00000462207 AKNAD1Q5T1N1 836 aa16■□□□□ 0.15
PBRM1-219ENST00000462207 USP50Q70EL3 339 aaPredicted RBP16■□□□□ 0.15
PBRM1-219ENST00000462207 FAM83AQ86UY5 434 aa16■□□□□ 0.15
PBRM1-219ENST00000462207 STAG1Q8WVM7 1258 aa16■□□□□ 0.15
PBRM1-219ENST00000462207 IL17RAQ96F46 866 aa16■□□□□ 0.15
PBRM1-219ENST00000462207 DLK2Q6UY11 383 aa15.99■□□□□ 0.15
PBRM1-219ENST00000462207 APOBEC3FQ8IUX4 373 aaKnown RBP15.99■□□□□ 0.15
PBRM1-219ENST00000462207 CSRNP1Q96S65 589 aa15.99■□□□□ 0.15
PBRM1-219ENST00000462207 DEFB129Q9H1M3 183 aa15.99■□□□□ 0.15
PBRM1-219ENST00000462207 PGAP2Q9UHJ9 254 aa15.99■□□□□ 0.15
PBRM1-219ENST00000462207 ADM5C9JUS6 153 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 HLA-DOAP06340 250 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 CASTP20810 708 aaKnown RBP15.98■□□□□ 0.15
PBRM1-219ENST00000462207 TNNI2P48788 182 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 TNFAIP1Q13829 316 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 RRP12Q5JTH9 1297 aaKnown RBP15.98■□□□□ 0.15
PBRM1-219ENST00000462207 PRAMEF18Q5VWM3 479 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 TTC6Q86TZ1 520 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 TCEANC2Q96MN5 208 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 TEPSINQ96N21 525 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 DHX36Q9H2U1 1008 aaKnown RBP15.98■□□□□ 0.15
PBRM1-219ENST00000462207 DNAJC18Q9H819 358 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 TOMM22Q9NS69 142 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.98■□□□□ 0.15
PBRM1-219ENST00000462207 B4E1Z4 1266 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 GABPAQ06546 454 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 KRT32Q14532 448 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 MFSD6Q6ZSS7 791 aa15.98■□□□□ 0.15
PBRM1-219ENST00000462207 PITPNM2Q9BZ72 1349 aa15.97■□□□□ 0.15
PBRM1-219ENST00000462207 VEGFAP15692 232 aaPredicted RBP15.97■□□□□ 0.15
PBRM1-219ENST00000462207 C16orf86Q6ZW13 317 aa15.97■□□□□ 0.15
PBRM1-219ENST00000462207 NEK1Q96PY6 1258 aa15.97■□□□□ 0.15
PBRM1-219ENST00000462207 SERPINB13Q9UIV8 391 aa15.97■□□□□ 0.15
PBRM1-219ENST00000462207 CDK8P49336 464 aa15.96■□□□□ 0.15
PBRM1-219ENST00000462207 CHST3Q7LGC8 479 aa15.96■□□□□ 0.15
PBRM1-219ENST00000462207 MB21D2Q8IYB1 491 aaPredicted RBP15.96■□□□□ 0.15
PBRM1-219ENST00000462207 EHD4Q9H223 541 aa15.96■□□□□ 0.15
PBRM1-219ENST00000462207 PI4KBQ9UBF8 816 aa15.96■□□□□ 0.15
PBRM1-219ENST00000462207 KDM4AO75164 1064 aa15.96■□□□□ 0.14
PBRM1-219ENST00000462207 SLC3A2P08195 630 aaKnown RBP15.96■□□□□ 0.14
PBRM1-219ENST00000462207 NBPF12Q5TAG4 269 aaPredicted RBP15.96■□□□□ 0.14
PBRM1-219ENST00000462207 BLOC1S2Q6QNY1 142 aa15.96■□□□□ 0.14
PBRM1-219ENST00000462207 CYB5R4Q7L1T6 521 aa15.96■□□□□ 0.14
PBRM1-219ENST00000462207 RALYLQ86SE5 291 aaKnown RBP15.96■□□□□ 0.14
PBRM1-219ENST00000462207 PNMA8AQ86V59 439 aaPredicted RBP15.96■□□□□ 0.14
PBRM1-219ENST00000462207 CRACR2BQ8N4Y2 399 aaPredicted RBP15.96■□□□□ 0.14
PBRM1-219ENST00000462207 NCOA7Q8NI08 942 aa15.96■□□□□ 0.14
PBRM1-219ENST00000462207 DCPSQ96C86 337 aaKnown RBP15.96■□□□□ 0.14
PBRM1-219ENST00000462207 RNF41Q9H4P4 317 aaPredicted RBP15.96■□□□□ 0.14
PBRM1-219ENST00000462207 ZSWIM6Q9HCJ5 1215 aa15.96■□□□□ 0.14
PBRM1-219ENST00000462207 SSC5DA1L4H1 1573 aa15.95■□□□□ 0.14
PBRM1-219ENST00000462207 FGRP09769 529 aa15.95■□□□□ 0.14
PBRM1-219ENST00000462207 SHMT1P34896 483 aa15.95■□□□□ 0.14
PBRM1-219ENST00000462207 ANTXR2P58335 489 aa15.95■□□□□ 0.14
PBRM1-219ENST00000462207 MIGA2Q7L4E1 593 aa15.95■□□□□ 0.14
PBRM1-219ENST00000462207 KRT26Q7Z3Y9 468 aa15.95■□□□□ 0.14
PBRM1-219ENST00000462207 LRRC2Q9BYS8 371 aa15.95■□□□□ 0.14
PBRM1-219ENST00000462207 TM6SF1Q9BZW5 370 aa15.95■□□□□ 0.14
PBRM1-219ENST00000462207 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
PBRM1-219ENST00000462207 ORC4O43929 436 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 RASA1P20936 1047 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 RPS6KB1P23443 525 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 PSMA5P28066 241 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 NEK4P51957 841 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 PDE4BQ07343 736 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 TRDNQ13061 729 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 RABEP1Q15276 862 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 SHROOM1Q2M3G4 852 aaPredicted RBP15.94■□□□□ 0.14
PBRM1-219ENST00000462207 FAM47AQ5JRC9 791 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 SULF1Q8IWU6 871 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 ZC3H15Q8WU90 426 aaKnown RBP15.94■□□□□ 0.14
PBRM1-219ENST00000462207 CLEC11AQ9Y240 323 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 RANBP6O60518 1105 aaKnown RBP15.94■□□□□ 0.14
PBRM1-219ENST00000462207 CD2BP2O95400 341 aaKnown RBP15.94■□□□□ 0.14
PBRM1-219ENST00000462207 MAP1SQ66K74 1059 aaPredicted RBP15.94■□□□□ 0.14
PBRM1-219ENST00000462207 RUFY3Q7L099 469 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 USP48Q86UV5 1035 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 GLIS2Q9BZE0 524 aaPredicted RBP15.94■□□□□ 0.14
PBRM1-219ENST00000462207 KRT23Q9C075 422 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 CNNM2Q9H8M5 875 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 MKNK2Q9HBH9 465 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 GPHNQ9NQX3 736 aaPredicted RBP15.94■□□□□ 0.14
PBRM1-219ENST00000462207 CYP46A1Q9Y6A2 500 aa15.94■□□□□ 0.14
PBRM1-219ENST00000462207 METTL16Q86W50 562 aaKnown RBP15.93■□□□□ 0.14
PBRM1-219ENST00000462207 ZKSCAN3Q9BRR0 538 aa15.93■□□□□ 0.14
PBRM1-219ENST00000462207 TRIM34Q9BYJ4 488 aa15.93■□□□□ 0.14
PBRM1-219ENST00000462207 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.93■□□□□ 0.14
PBRM1-219ENST00000462207 ZSWIM5Q9P217 1185 aa15.93■□□□□ 0.14
PBRM1-219ENST00000462207 FZD1Q9UP38 647 aa15.93■□□□□ 0.14
PBRM1-219ENST00000462207 MYH8P13535 1937 aa15.92■□□□□ 0.14
PBRM1-219ENST00000462207 PRC1O43663 620 aa15.92■□□□□ 0.14
PBRM1-219ENST00000462207 RRP1BQ14684 758 aaKnown RBP15.92■□□□□ 0.14
PBRM1-219ENST00000462207 FOXP4Q8IVH2 680 aaPredicted RBP15.92■□□□□ 0.14
PBRM1-219ENST00000462207 ESR2Q92731 530 aa15.92■□□□□ 0.14
PBRM1-219ENST00000462207 TTC14Q96N46 770 aa15.92■□□□□ 0.14
PBRM1-219ENST00000462207 SWAP70Q9UH65 585 aa15.92■□□□□ 0.14
PBRM1-219ENST00000462207 PPP2R3BQ9Y5P8 575 aa15.92■□□□□ 0.14
PBRM1-219ENST00000462207 NMT2O60551 498 aa15.92■□□□□ 0.14
PBRM1-219ENST00000462207 PCP11498 1178 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms