RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 ARMC3Q5W041 872 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 FAM83AQ86UY5 434 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 OGFOD1Q8N543 542 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 TBC1D22AQ8WUA7 517 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 MAST2Q6P0Q8 1798 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 POLR2AP24928 1970 aaKnown RBP6.84□□□□□ -1.31
CLK1-207ENST00000461981 LOC285556D6RIA3 1793 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 UFL1O94874 794 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 LIG1P18858 919 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 IGHMBP2P38935 993 aaKnown RBP6.84□□□□□ -1.31
CLK1-207ENST00000461981 TNNI2P48788 182 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 LMAN1P49257 510 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 CLEC17AQ6ZS10 378 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 WDR63Q8IWG1 891 aa6.84□□□□□ -1.31
CLK1-207ENST00000461981 CAPN15O75808 1086 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 MYL6BP14649 208 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 CASP7P55210 303 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 UBE4AQ14139 1066 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 WDR43Q15061 677 aaKnown RBP eCLIP6.83□□□□□ -1.32
CLK1-207ENST00000461981 SWT1Q5T5J6 900 aaKnown RBP6.83□□□□□ -1.32
CLK1-207ENST00000461981 ZNF804AQ7Z570 1209 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 KIF2CQ99661 725 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 DOCK2Q92608 1830 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 CCDC196A0A1B0GTZ2 297 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 EIF3CLB5ME19 914 aaKnown RBP6.83□□□□□ -1.32
CLK1-207ENST00000461981 C6orf229H3BNL8 230 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 MYO1BO43795 1136 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 TPM3P06753 285 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 PLA2G4AP47712 749 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 CCT4P50991 539 aaKnown RBP6.83□□□□□ -1.32
CLK1-207ENST00000461981 C11orf91Q3C1V1 193 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 CWC27Q6UX04 472 aaKnown RBP6.83□□□□□ -1.32
CLK1-207ENST00000461981 MMS22LQ6ZRQ5 1243 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 IFNL1Q8IU54 200 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 ANKRD13AQ8IZ07 590 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 FBXO18Q8NFZ0 1043 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 CELF1Q92879 486 aaKnown RBP6.83□□□□□ -1.32
CLK1-207ENST00000461981 EIF3CQ99613 913 aaKnown RBP6.83□□□□□ -1.32
CLK1-207ENST00000461981 NUCKS1Q9H1E3 243 aaKnown RBP6.83□□□□□ -1.32
CLK1-207ENST00000461981 PTPN22Q9Y2R2 807 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 FHOD1Q9Y613 1164 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 PTPRCP08575 1304 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 G3V3G9 751 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 PPP1R12BO60237 982 aaPredicted RBP6.83□□□□□ -1.32
CLK1-207ENST00000461981 RAD17O75943 681 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 HCLS1P14317 486 aaPredicted RBP6.83□□□□□ -1.32
CLK1-207ENST00000461981 PAX7P23759 505 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 GTF2A2P52657 109 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 TPM4P67936 248 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 DCAF8Q5TAQ9 597 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 CASC1Q6TDU7 716 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 LINS1Q8NG48 757 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 GOLGA5Q8TBA6 731 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 DNAAF4Q8WXU2 420 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 THOC1Q96FV9 657 aaKnown RBP6.83□□□□□ -1.32
CLK1-207ENST00000461981 PDRG1Q9NUG6 133 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 CHPF2Q9P2E5 772 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 PCDHB15Q9Y5E8 787 aa6.83□□□□□ -1.32
CLK1-207ENST00000461981 MGAMO43451 1857 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 PNMA6AP0CW24 399 aaPredicted RBP6.82□□□□□ -1.32
CLK1-207ENST00000461981 FOXD4L6Q3SYB3 417 aaPredicted RBP6.82□□□□□ -1.32
CLK1-207ENST00000461981 FOXD4L3Q6VB84 417 aaPredicted RBP6.82□□□□□ -1.32
CLK1-207ENST00000461981 RIC3Q7Z5B4 369 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 SUGP1Q8IWZ8 645 aaKnown RBP6.82□□□□□ -1.32
CLK1-207ENST00000461981 ANKLE1Q8NAG6 615 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 PPM1EQ8WY54 764 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 ZNF236Q9UL36 1845 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 SMC2O95347 1197 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 IPO7O95373 1038 aaKnown RBP6.82□□□□□ -1.32
CLK1-207ENST00000461981 PTGS1P23219 599 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 HOXD10P28358 340 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 NUCB2P80303 420 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 TRDNQ13061 729 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 DCTN1Q14203 1278 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 TTLL11Q8NHH1 800 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 MINPP1Q9UNW1 487 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 MYH13Q9UKX3 1938 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 ADGRA2Q96PE1 1338 aa6.82□□□□□ -1.32
CLK1-207ENST00000461981 SEMA3EO15041 775 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 LRMPQ12912 555 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 TPD52L1Q16890 204 aaPredicted RBP6.81□□□□□ -1.32
CLK1-207ENST00000461981 PROSER3Q2NL68 480 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 SPDYE2Q495Y8 402 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 ANGEL2Q5VTE6 544 aaKnown RBP6.81□□□□□ -1.32
CLK1-207ENST00000461981 FOXR1Q6PIV2 292 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 ANKRD23Q86SG2 305 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 TRMT44Q8IYL2 757 aaKnown RBP6.81□□□□□ -1.32
CLK1-207ENST00000461981 CCDC24Q8N4L8 307 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 GTF3C2Q8WUA4 911 aaPredicted RBP6.81□□□□□ -1.32
CLK1-207ENST00000461981 NBPF3Q9H094 633 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 SALL1Q9NSC2 1324 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 TPM1P09493 284 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 PPIL2Q13356 520 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 OLFM4Q6UX06 510 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 GIMAP7Q8NHV1 300 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 FAXDC2Q96IV6 333 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 ZFYVE28Q9HCC9 887 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 PAXBP1Q9Y5B6 917 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 DOCK1Q14185 1865 aa6.81□□□□□ -1.32
CLK1-207ENST00000461981 MROH5Q6ZUA9 1318 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms