RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 ZNF654Q8IZM8 581 aa4.79□□□□□ -1.64
ATP13A3-206ENST00000461660 PIBF1Q8WXW3 757 aa4.79□□□□□ -1.64
ATP13A3-206ENST00000461660 CCDC34Q96HJ3 373 aa4.79□□□□□ -1.64
ATP13A3-206ENST00000461660 RIOK1Q9BRS2 568 aaKnown RBP4.79□□□□□ -1.64
ATP13A3-206ENST00000461660 MYL10Q9BUA6 226 aa4.79□□□□□ -1.64
ATP13A3-206ENST00000461660 TAOK3Q9H2K8 898 aa4.79□□□□□ -1.64
ATP13A3-206ENST00000461660 VEZTQ9HBM0 779 aa4.79□□□□□ -1.64
ATP13A3-206ENST00000461660 GDPD2Q9HCC8 539 aa4.79□□□□□ -1.64
ATP13A3-206ENST00000461660 GPHNQ9NQX3 736 aaPredicted RBP4.79□□□□□ -1.64
ATP13A3-206ENST00000461660 ZSWIM5Q9P217 1185 aa4.79□□□□□ -1.64
ATP13A3-206ENST00000461660 FAM205AQ6ZU69 1335 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 KLRG2A4D1S0 409 aaPredicted RBP4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 RAD17O75943 681 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 ATP2B1P20020 1258 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 LIFRP42702 1097 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 EXOSC10Q01780 885 aaKnown RBP4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 PKP1Q13835 747 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 PPP2R5BQ15173 497 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 FAM47AQ5JRC9 791 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 STRIP1Q5VSL9 837 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 JMYQ8N9B5 988 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 ZSCAN10Q96SZ4 725 aaPredicted RBP4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 AK9Q5TCS8 1911 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 CYP2D6P10635 497 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 ME1P48163 572 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 EIF6P56537 245 aaKnown RBP4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 PPP4CP60510 307 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 C1QBPQ07021 282 aaKnown RBP4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 CCDC96Q2M329 555 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 NSUN7Q8NE18 718 aaKnown RBP4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 MTA3Q9BTC8 594 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 CABP5Q9NP86 173 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 ZNF277Q9NRM2 450 aaPredicted RBP4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 RBM28Q9NW13 759 aaKnown RBP4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 RNF216Q9NWF9 866 aaPredicted RBP4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 RBM27Q9P2N5 1060 aaKnown RBP4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 DAGLAQ9Y4D2 1042 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 SCN7AQ01118 1682 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 MYO3BQ8WXR4 1341 aa4.78□□□□□ -1.64
ATP13A3-206ENST00000461660 CRKP46108 304 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 DNM1Q05193 864 aaKnown RBP4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 KIAA2012Q0VF49 1180 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 TCP10Q12799 353 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 CTR9Q6PD62 1173 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 CYB5R4Q7L1T6 521 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 ADGRA1Q86SQ6 560 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 TFIP11Q9UBB9 837 aaKnown RBP4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 SEC63Q9UGP8 760 aaKnown RBP4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 NOL7Q9UMY1 257 aaKnown RBP4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 MTMR6Q9Y217 621 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 GJA3Q9Y6H8 435 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 GPR75-ASB3A0A0A6YYF3 556 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 ADD1P35611 737 aaKnown RBP4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 TGFB2P61812 414 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 TNIP1Q15025 636 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 KLHL40Q2TBA0 621 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 SBK1Q52WX2 424 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 CDC37L1Q7L3B6 337 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 INCENPQ9NQS7 918 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 CNPY2Q9Y2B0 182 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 ZNF831Q5JPB2 1677 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 SPEF2Q9C093 1822 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 ORC4O43929 436 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 KINO60870 393 aaKnown RBP4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 DDAH1O94760 285 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 DEXIO95424 95 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 TNNI2P48788 182 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 RBM26Q5T8P6 1007 aaKnown RBP4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 C12orf60Q5U649 245 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 CIAPIN1Q6FI81 312 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 SAMD1Q6SPF0 538 aaPredicted RBP4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 FANCBQ8NB91 859 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 RASSF8Q8NHQ8 419 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 PHKBQ93100 1093 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 DYNLL2Q96FJ2 89 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 SPON1Q9HCB6 807 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 SERPINB13Q9UIV8 391 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 ANAPC4Q9UJX5 808 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 COL5A3P25940 1745 aaPredicted RBP4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 MYH3P11055 1940 aa4.77□□□□□ -1.65
ATP13A3-206ENST00000461660 ANTXR2P58335 489 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 NLRP5P59047 1200 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 UBE2HP62256 183 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 HHIPL2Q6UWX4 724 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 BRAPQ7Z569 592 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 SGMS1Q86VZ5 419 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 MXD3Q9BW11 206 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 DHX36Q9H2U1 1008 aaKnown RBP4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 LY9Q9HBG7 655 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 SWAP70Q9UH65 585 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 BRPF3Q9ULD4 1205 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 CTDP1Q9Y5B0 961 aaPredicted RBP4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 CICQ96RK0 1608 aaPredicted RBP4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 FLT1P17948 1338 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 RREB1Q92766 1687 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 MARCH6O60337 910 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 PLCB2Q00722 1185 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 CFAP100Q494V2 611 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 USP48Q86UV5 1035 aa4.76□□□□□ -1.65
ATP13A3-206ENST00000461660 PNMA1Q8ND90 353 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms