RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 NBPF11Q86T75 865 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 ZSCAN30Q86W11 494 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 FANCBQ8NB91 859 aa23.49■■□□□ 1.35
CCM2-203ENST00000461377 ORC4O43929 436 aa23.48■■□□□ 1.35
CCM2-203ENST00000461377 ATP2B4P23634 1241 aa23.48■■□□□ 1.35
CCM2-203ENST00000461377 HOXA10P31260 410 aaPredicted RBP23.48■■□□□ 1.35
CCM2-203ENST00000461377 FAM160A1Q05DH4 1040 aa23.48■■□□□ 1.35
CCM2-203ENST00000461377 TRIM29Q14134 588 aa23.48■■□□□ 1.35
CCM2-203ENST00000461377 ANO1Q5XXA6 986 aa23.48■■□□□ 1.35
CCM2-203ENST00000461377 ENAHQ8N8S7 591 aaPredicted RBP23.48■■□□□ 1.35
CCM2-203ENST00000461377 FSIP1Q8NA03 581 aa23.48■■□□□ 1.35
CCM2-203ENST00000461377 ARPP21Q9UBL0 812 aaPredicted RBP23.48■■□□□ 1.35
CCM2-203ENST00000461377 USP25Q9UHP3 1055 aa23.48■■□□□ 1.35
CCM2-203ENST00000461377 LAMB1P07942 1786 aa23.48■■□□□ 1.35
CCM2-203ENST00000461377 CTAGE5O15320 804 aa23.47■■□□□ 1.35
CCM2-203ENST00000461377 LDHBP07195 334 aaKnown RBP23.47■■□□□ 1.35
CCM2-203ENST00000461377 U2AF2P26368 475 aaKnown RBP eCLIP23.47■■□□□ 1.35
CCM2-203ENST00000461377 PPP2R5BQ15173 497 aa23.47■■□□□ 1.35
CCM2-203ENST00000461377 FAM200AQ8TCP9 573 aa23.47■■□□□ 1.35
CCM2-203ENST00000461377 KLRG2A4D1S0 409 aaPredicted RBP23.47■■□□□ 1.35
CCM2-203ENST00000461377 UBE2Q2LH0YL09 131 aa23.47■■□□□ 1.35
CCM2-203ENST00000461377 SPTLC2O15270 562 aa23.47■■□□□ 1.35
CCM2-203ENST00000461377 TRIM22Q8IYM9 498 aa23.47■■□□□ 1.35
CCM2-203ENST00000461377 CRACR2BQ8N4Y2 399 aaPredicted RBP23.47■■□□□ 1.35
CCM2-203ENST00000461377 MRPS27Q92552 414 aaKnown RBP23.47■■□□□ 1.35
CCM2-203ENST00000461377 GPR101Q96P66 508 aaPredicted RBP23.47■■□□□ 1.35
CCM2-203ENST00000461377 BBOX1O75936 387 aa23.46■■□□□ 1.35
CCM2-203ENST00000461377 UFL1O94874 794 aa23.46■■□□□ 1.35
CCM2-203ENST00000461377 NUP133Q8WUM0 1156 aa23.46■■□□□ 1.35
CCM2-203ENST00000461377 PRDM1O75626 825 aa23.45■■□□□ 1.35
CCM2-203ENST00000461377 GUCY1A2P33402 732 aa23.45■■□□□ 1.35
CCM2-203ENST00000461377 SF3A1Q15459 793 aaKnown RBP23.45■■□□□ 1.35
CCM2-203ENST00000461377 IQCA1Q86XH1 822 aa23.45■■□□□ 1.35
CCM2-203ENST00000461377 CRAMP1Q96RY5 1269 aa23.45■■□□□ 1.35
CCM2-203ENST00000461377 CCDC39Q9UFE4 941 aa23.45■■□□□ 1.35
CCM2-203ENST00000461377 GGA1Q9UJY5 639 aa23.45■■□□□ 1.35
CCM2-203ENST00000461377 DLEC1Q9Y238 1755 aa23.45■■□□□ 1.34
CCM2-203ENST00000461377 DEXIO95424 95 aa23.45■■□□□ 1.34
CCM2-203ENST00000461377 GSTO1P78417 241 aa23.45■■□□□ 1.34
CCM2-203ENST00000461377 EVX2Q03828 476 aa23.45■■□□□ 1.34
CCM2-203ENST00000461377 SASS6Q6UVJ0 657 aa23.45■■□□□ 1.34
CCM2-203ENST00000461377 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.45■■□□□ 1.34
CCM2-203ENST00000461377 PODXL2Q9NZ53 605 aa23.45■■□□□ 1.34
CCM2-203ENST00000461377 SLC3A2P08195 630 aaKnown RBP23.44■■□□□ 1.34
CCM2-203ENST00000461377 IFIT1BQ5T764 474 aaKnown RBP23.44■■□□□ 1.34
CCM2-203ENST00000461377 FMR1NBQ8N0W7 255 aaPredicted RBP23.44■■□□□ 1.34
CCM2-203ENST00000461377 NOL7Q9UMY1 257 aaKnown RBP23.44■■□□□ 1.34
CCM2-203ENST00000461377 KINO60870 393 aaKnown RBP23.43■■□□□ 1.34
CCM2-203ENST00000461377 ADCY5O95622 1261 aa23.43■■□□□ 1.34
CCM2-203ENST00000461377 CYP2D6P10635 497 aa23.43■■□□□ 1.34
CCM2-203ENST00000461377 GNL2Q13823 731 aaKnown RBP23.43■■□□□ 1.34
CCM2-203ENST00000461377 SLC39A14Q15043 492 aa23.43■■□□□ 1.34
CCM2-203ENST00000461377 GRIK5Q16478 980 aa23.43■■□□□ 1.34
CCM2-203ENST00000461377 ANO6Q4KMQ2 910 aa23.43■■□□□ 1.34
CCM2-203ENST00000461377 CD209Q9NNX6 404 aa23.43■■□□□ 1.34
CCM2-203ENST00000461377 MKRN1Q9UHC7 482 aaKnown RBP23.43■■□□□ 1.34
CCM2-203ENST00000461377 IL1R1P14778 569 aa23.43■■□□□ 1.34
CCM2-203ENST00000461377 CATIPQ7Z7H3 387 aa23.43■■□□□ 1.34
CCM2-203ENST00000461377 MMP1P03956 469 aa23.42■■□□□ 1.34
CCM2-203ENST00000461377 PPP4CP60510 307 aa23.42■■□□□ 1.34
CCM2-203ENST00000461377 AXDND1Q5T1B0 1012 aaPredicted RBP23.42■■□□□ 1.34
CCM2-203ENST00000461377 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
CCM2-203ENST00000461377 MYH2Q9UKX2 1941 aa23.42■■□□□ 1.34
CCM2-203ENST00000461377 CMTR1Q8N1G2 835 aaKnown RBP23.41■■□□□ 1.34
CCM2-203ENST00000461377 RNF26Q9BY78 433 aaPredicted RBP23.41■■□□□ 1.34
CCM2-203ENST00000461377 LRRC37AA6NMS7 1700 aa23.41■■□□□ 1.34
CCM2-203ENST00000461377 DDAH1O94760 285 aa23.41■■□□□ 1.34
CCM2-203ENST00000461377 CALM1P0DP23 149 aa23.41■■□□□ 1.34
CCM2-203ENST00000461377 CALM2P0DP24 149 aa23.41■■□□□ 1.34
CCM2-203ENST00000461377 CALM3P0DP25 149 aa23.41■■□□□ 1.34
CCM2-203ENST00000461377 PTPAQ15257 358 aa23.41■■□□□ 1.34
CCM2-203ENST00000461377 ZNF827Q17R98 1081 aa23.41■■□□□ 1.34
CCM2-203ENST00000461377 MAP3K14Q99558 947 aa23.41■■□□□ 1.34
CCM2-203ENST00000461377 CBX8Q9HC52 389 aa23.41■■□□□ 1.34
CCM2-203ENST00000461377 RBM28Q9NW13 759 aaKnown RBP23.41■■□□□ 1.34
CCM2-203ENST00000461377 MCM9Q9NXL9 1143 aa23.41■■□□□ 1.34
CCM2-203ENST00000461377 A0A1B0GVL5 298 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 LDHCP07864 332 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 RBM6P78332 1123 aaKnown RBP23.4■■□□□ 1.34
CCM2-203ENST00000461377 PDE4BQ07343 736 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 FUT2Q10981 343 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 TROAPQ12815 778 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 DIXDC1Q155Q3 683 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 TMC4Q7Z404 712 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 CCDC82Q8N4S0 544 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 TBC1D16Q8TBP0 767 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 SH3RF3Q8TEJ3 882 aaPredicted RBP23.4■■□□□ 1.34
CCM2-203ENST00000461377 TAOK2Q9UL54 1235 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 MROH7-TTC4A0A0A0MT08 1334 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 PLSCR1O15162 318 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 AP5Z1O43299 807 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 PPP6R2O75170 966 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 CAVIN2O95810 425 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 BAG3O95817 575 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 USP17L8P0C7I0 530 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 NT5C2P49902 561 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 NDUFA8P51970 172 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 SAFBQ15424 915 aaKnown RBP eCLIP23.4■■□□□ 1.34
CCM2-203ENST00000461377 C12orf60Q5U649 245 aa23.4■■□□□ 1.34
CCM2-203ENST00000461377 NOSTRINQ8IVI9 506 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms