RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 NACAP1Q9BZK3 213 aa17.22■□□□□ 0.35
COL5A3-202ENST00000461214 GGA3Q9NZ52 723 aa17.22■□□□□ 0.35
COL5A3-202ENST00000461214 SLC4A4Q9Y6R1 1079 aa17.22■□□□□ 0.35
COL5A3-202ENST00000461214 MYH4Q9Y623 1939 aa17.21■□□□□ 0.35
COL5A3-202ENST00000461214 ENTPD3O75355 529 aa17.21■□□□□ 0.35
COL5A3-202ENST00000461214 USP5P45974 858 aa17.21■□□□□ 0.35
COL5A3-202ENST00000461214 TNNI2P48788 182 aa17.21■□□□□ 0.35
COL5A3-202ENST00000461214 KIAA1211Q6ZU35 1233 aa17.21■□□□□ 0.35
COL5A3-202ENST00000461214 RASAL3Q86YV0 1011 aa17.21■□□□□ 0.35
COL5A3-202ENST00000461214 PPP2R3BQ9Y5P8 575 aa17.21■□□□□ 0.35
COL5A3-202ENST00000461214 ROBO3Q96MS0 1386 aa17.2■□□□□ 0.34
COL5A3-202ENST00000461214 CLRN2A0PK11 232 aa17.2■□□□□ 0.34
COL5A3-202ENST00000461214 PATL2C9JE40 543 aaKnown RBP17.2■□□□□ 0.34
COL5A3-202ENST00000461214 HSPD1P10809 573 aaKnown RBP17.2■□□□□ 0.34
COL5A3-202ENST00000461214 FXR1P51114 621 aaKnown RBP eCLIP17.2■□□□□ 0.34
COL5A3-202ENST00000461214 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
COL5A3-202ENST00000461214 DCP1AQ9NPI6 582 aaPredicted RBP17.2■□□□□ 0.34
COL5A3-202ENST00000461214 ARPP21Q9UBL0 812 aaPredicted RBP17.2■□□□□ 0.34
COL5A3-202ENST00000461214 GSG1L2A8MUP6 293 aa17.19■□□□□ 0.34
COL5A3-202ENST00000461214 FOXP2O15409 715 aa17.19■□□□□ 0.34
COL5A3-202ENST00000461214 ALX1Q15699 326 aa17.19■□□□□ 0.34
COL5A3-202ENST00000461214 ANGEL2Q5VTE6 544 aaKnown RBP17.19■□□□□ 0.34
COL5A3-202ENST00000461214 FBXO46Q6PJ61 603 aaPredicted RBP17.19■□□□□ 0.34
COL5A3-202ENST00000461214 SULF1Q8IWU6 871 aa17.19■□□□□ 0.34
COL5A3-202ENST00000461214 SDR42E1Q8WUS8 393 aa17.19■□□□□ 0.34
COL5A3-202ENST00000461214 OSBPL5Q9H0X9 879 aaPredicted RBP17.19■□□□□ 0.34
COL5A3-202ENST00000461214 VEZTQ9HBM0 779 aa17.19■□□□□ 0.34
COL5A3-202ENST00000461214 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
COL5A3-202ENST00000461214 ANO2Q9NQ90 1003 aa17.19■□□□□ 0.34
COL5A3-202ENST00000461214 TAOK2Q9UL54 1235 aa17.19■□□□□ 0.34
COL5A3-202ENST00000461214 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
COL5A3-202ENST00000461214 TDO2P48775 406 aa17.18■□□□□ 0.34
COL5A3-202ENST00000461214 NFIAQ12857 509 aa17.18■□□□□ 0.34
COL5A3-202ENST00000461214 AMOTL1Q8IY63 956 aa17.18■□□□□ 0.34
COL5A3-202ENST00000461214 REM2Q8IYK8 340 aaPredicted RBP17.18■□□□□ 0.34
COL5A3-202ENST00000461214 FAM151AQ8WW52 585 aa17.18■□□□□ 0.34
COL5A3-202ENST00000461214 CDCA5Q96FF9 252 aa17.18■□□□□ 0.34
COL5A3-202ENST00000461214 LSG1Q9H089 658 aaKnown RBP17.18■□□□□ 0.34
COL5A3-202ENST00000461214 NAPBQ9H115 298 aa17.18■□□□□ 0.34
COL5A3-202ENST00000461214 DHX36Q9H2U1 1008 aaKnown RBP17.18■□□□□ 0.34
COL5A3-202ENST00000461214 DDX4Q9NQI0 724 aaKnown RBP17.18■□□□□ 0.34
COL5A3-202ENST00000461214 FAM198AQ9UFP1 575 aa17.18■□□□□ 0.34
COL5A3-202ENST00000461214 ASTN2O75129 1339 aaPredicted RBP17.18■□□□□ 0.34
COL5A3-202ENST00000461214 PRKAB2O43741 272 aa17.17■□□□□ 0.34
COL5A3-202ENST00000461214 APPP05067 770 aa17.17■□□□□ 0.34
COL5A3-202ENST00000461214 CACNB3P54284 484 aa17.17■□□□□ 0.34
COL5A3-202ENST00000461214 PICALMQ13492 652 aa17.17■□□□□ 0.34
COL5A3-202ENST00000461214 VPS53Q5VIR6 699 aa17.17■□□□□ 0.34
COL5A3-202ENST00000461214 MAPKAPK5Q8IW41 473 aa17.17■□□□□ 0.34
COL5A3-202ENST00000461214 IFNL3Q8IZI9 196 aa17.17■□□□□ 0.34
COL5A3-202ENST00000461214 CTNNA3Q9UI47 895 aa17.17■□□□□ 0.34
COL5A3-202ENST00000461214 U3KPZ7 1027 aaPredicted RBP17.17■□□□□ 0.34
COL5A3-202ENST00000461214 PTPRFP10586 1907 aa17.17■□□□□ 0.34
COL5A3-202ENST00000461214 POTEFA5A3E0 1075 aa17.16■□□□□ 0.34
COL5A3-202ENST00000461214 TCP10L2B9ZVM9 353 aa17.16■□□□□ 0.34
COL5A3-202ENST00000461214 SBK1Q52WX2 424 aa17.16■□□□□ 0.34
COL5A3-202ENST00000461214 MAP4K1Q92918 833 aa17.16■□□□□ 0.34
COL5A3-202ENST00000461214 GPR25O00155 361 aa17.15■□□□□ 0.34
COL5A3-202ENST00000461214 MKRN3Q13064 507 aaKnown RBP17.15■□□□□ 0.34
COL5A3-202ENST00000461214 MOB2Q70IA6 237 aa17.15■□□□□ 0.34
COL5A3-202ENST00000461214 HOOK2Q96ED9 719 aa17.15■□□□□ 0.34
COL5A3-202ENST00000461214 EHD4Q9H223 541 aa17.15■□□□□ 0.34
COL5A3-202ENST00000461214 MCM9Q9NXL9 1143 aa17.15■□□□□ 0.34
COL5A3-202ENST00000461214 SSC5DA1L4H1 1573 aa17.15■□□□□ 0.34
COL5A3-202ENST00000461214 HLA-DOAP06340 250 aa17.14■□□□□ 0.33
COL5A3-202ENST00000461214 PTH1RQ03431 593 aa17.14■□□□□ 0.33
COL5A3-202ENST00000461214 TCP10Q12799 353 aa17.14■□□□□ 0.33
COL5A3-202ENST00000461214 RASA3Q14644 834 aa17.14■□□□□ 0.33
COL5A3-202ENST00000461214 TTC6Q86TZ1 520 aa17.14■□□□□ 0.33
COL5A3-202ENST00000461214 DEFB129Q9H1M3 183 aa17.14■□□□□ 0.33
COL5A3-202ENST00000461214 FGAP02671 866 aa17.13■□□□□ 0.33
COL5A3-202ENST00000461214 IMMTQ16891 758 aaKnown RBP17.13■□□□□ 0.33
COL5A3-202ENST00000461214 CTR9Q6PD62 1173 aa17.13■□□□□ 0.33
COL5A3-202ENST00000461214 BACH2Q9BYV9 841 aa17.13■□□□□ 0.33
COL5A3-202ENST00000461214 ANAPC4Q9UJX5 808 aa17.13■□□□□ 0.33
COL5A3-202ENST00000461214 RBM8AQ9Y5S9 174 aaKnown RBP17.13■□□□□ 0.33
COL5A3-202ENST00000461214 USP17L12C9JPN9 530 aa17.12■□□□□ 0.33
COL5A3-202ENST00000461214 USP17L21D6R901 530 aa17.12■□□□□ 0.33
COL5A3-202ENST00000461214 FKTNO75072 461 aa17.12■□□□□ 0.33
COL5A3-202ENST00000461214 POLR3DP05423 398 aaPredicted RBP17.12■□□□□ 0.33
COL5A3-202ENST00000461214 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
COL5A3-202ENST00000461214 RNF20Q5VTR2 975 aa17.12■□□□□ 0.33
COL5A3-202ENST00000461214 ZSCAN29Q8IWY8 852 aaPredicted RBP17.12■□□□□ 0.33
COL5A3-202ENST00000461214 TEPSINQ96N21 525 aa17.12■□□□□ 0.33
COL5A3-202ENST00000461214 TMEM39BQ9GZU3 492 aa17.12■□□□□ 0.33
COL5A3-202ENST00000461214 UPF2Q9HAU5 1272 aaKnown RBP17.12■□□□□ 0.33
COL5A3-202ENST00000461214 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
COL5A3-202ENST00000461214 SAP30BPQ9UHR5 308 aaKnown RBP17.12■□□□□ 0.33
COL5A3-202ENST00000461214 SCAF8Q9UPN6 1271 aaKnown RBP17.12■□□□□ 0.33
COL5A3-202ENST00000461214 DDTLA6NHG4 134 aaPredicted RBP17.11■□□□□ 0.33
COL5A3-202ENST00000461214 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
COL5A3-202ENST00000461214 SLC3A2P08195 630 aaKnown RBP17.11■□□□□ 0.33
COL5A3-202ENST00000461214 PCP11498 1178 aaKnown RBP17.11■□□□□ 0.33
COL5A3-202ENST00000461214 MCCP23508 829 aa17.11■□□□□ 0.33
COL5A3-202ENST00000461214 NT5C2P49902 561 aa17.11■□□□□ 0.33
COL5A3-202ENST00000461214 PPARAQ07869 468 aa17.11■□□□□ 0.33
COL5A3-202ENST00000461214 TTLL12Q14166 644 aaPredicted RBP17.11■□□□□ 0.33
COL5A3-202ENST00000461214 SH3BP5LQ7L8J4 393 aa17.11■□□□□ 0.33
COL5A3-202ENST00000461214 METTL16Q86W50 562 aaKnown RBP17.11■□□□□ 0.33
COL5A3-202ENST00000461214 USP26Q9BXU7 913 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms