RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 MYL10Q9BUA6 226 aa20.32■□□□□ 0.84
CDK11A-209ENST00000460465 ATP6V1DQ9Y5K8 247 aa20.32■□□□□ 0.84
CDK11A-209ENST00000460465 SLC12A7Q9Y666 1083 aa20.32■□□□□ 0.84
CDK11A-209ENST00000460465 TNKSO95271 1327 aa20.32■□□□□ 0.84
CDK11A-209ENST00000460465 ROBO3Q96MS0 1386 aa20.31■□□□□ 0.84
CDK11A-209ENST00000460465 CPLX1O14810 134 aa20.31■□□□□ 0.84
CDK11A-209ENST00000460465 PRPF40AO75400 957 aaKnown RBP20.31■□□□□ 0.84
CDK11A-209ENST00000460465 SCNN1DP51172 638 aa20.31■□□□□ 0.84
CDK11A-209ENST00000460465 PDE4BQ07343 736 aa20.31■□□□□ 0.84
CDK11A-209ENST00000460465 STRIP1Q5VSL9 837 aa20.31■□□□□ 0.84
CDK11A-209ENST00000460465 AMOTL1Q8IY63 956 aa20.31■□□□□ 0.84
CDK11A-209ENST00000460465 SAP30BPQ9UHR5 308 aaKnown RBP20.31■□□□□ 0.84
CDK11A-209ENST00000460465 KIF3AQ9Y496 699 aa20.31■□□□□ 0.84
CDK11A-209ENST00000460465 BRCA1P38398 1863 aaKnown RBP20.31■□□□□ 0.84
CDK11A-209ENST00000460465 PPIP5K2O43314 1243 aa20.31■□□□□ 0.84
CDK11A-209ENST00000460465 SEC23AQ15436 765 aa20.31■□□□□ 0.84
CDK11A-209ENST00000460465 GRIPAP1Q4V328 841 aa20.31■□□□□ 0.84
CDK11A-209ENST00000460465 FLT1P17948 1338 aa20.31■□□□□ 0.84
CDK11A-209ENST00000460465 GOLGA8AA7E2F4 631 aa20.3■□□□□ 0.84
CDK11A-209ENST00000460465 FDPSP14324 419 aaKnown RBP20.3■□□□□ 0.84
CDK11A-209ENST00000460465 FKBP1AP62942 108 aaKnown RBP20.3■□□□□ 0.84
CDK11A-209ENST00000460465 SKOR2Q2VWA4 1001 aaPredicted RBP20.3■□□□□ 0.84
CDK11A-209ENST00000460465 DACT2Q5SW24 774 aa20.3■□□□□ 0.84
CDK11A-209ENST00000460465 CCDC144CPQ8IYA2 1237 aa20.3■□□□□ 0.84
CDK11A-209ENST00000460465 RTKN2Q8IZC4 609 aa20.3■□□□□ 0.84
CDK11A-209ENST00000460465 TMTC2Q8N394 836 aa20.3■□□□□ 0.84
CDK11A-209ENST00000460465 ZSCAN10Q96SZ4 725 aaPredicted RBP20.3■□□□□ 0.84
CDK11A-209ENST00000460465 CDC27P30260 824 aa20.3■□□□□ 0.84
CDK11A-209ENST00000460465 FOSBP53539 338 aa20.3■□□□□ 0.84
CDK11A-209ENST00000460465 SYNE3Q6ZMZ3 975 aa20.3■□□□□ 0.84
CDK11A-209ENST00000460465 FERMT3Q86UX7 667 aa20.3■□□□□ 0.84
CDK11A-209ENST00000460465 MYH15Q9Y2K3 1946 aa20.29■□□□□ 0.84
CDK11A-209ENST00000460465 USP17L3A6NCW0 530 aa20.29■□□□□ 0.84
CDK11A-209ENST00000460465 USP17L4A6NCW7 530 aa20.29■□□□□ 0.84
CDK11A-209ENST00000460465 H3BQV1 296 aa20.29■□□□□ 0.84
CDK11A-209ENST00000460465 POLR3DP05423 398 aaPredicted RBP20.29■□□□□ 0.84
CDK11A-209ENST00000460465 ADD1P35611 737 aaKnown RBP20.29■□□□□ 0.84
CDK11A-209ENST00000460465 TGFB2P61812 414 aa20.29■□□□□ 0.84
CDK11A-209ENST00000460465 IFFO2Q5TF58 517 aa20.29■□□□□ 0.84
CDK11A-209ENST00000460465 USP17L1Q7RTZ2 530 aa20.29■□□□□ 0.84
CDK11A-209ENST00000460465 IQCA1Q86XH1 822 aa20.29■□□□□ 0.84
CDK11A-209ENST00000460465 DYNLL2Q96FJ2 89 aa20.29■□□□□ 0.84
CDK11A-209ENST00000460465 NID2Q14112 1375 aa20.29■□□□□ 0.84
CDK11A-209ENST00000460465 ENAHQ8N8S7 591 aaPredicted RBP20.28■□□□□ 0.84
CDK11A-209ENST00000460465 PLCD1P51178 756 aa20.28■□□□□ 0.84
CDK11A-209ENST00000460465 FAM47AQ5JRC9 791 aa20.28■□□□□ 0.84
CDK11A-209ENST00000460465 HHIPL2Q6UWX4 724 aa20.28■□□□□ 0.84
CDK11A-209ENST00000460465 UPF1Q92900 1129 aaKnown RBP eCLIP20.28■□□□□ 0.84
CDK11A-209ENST00000460465 TEKT1Q969V4 418 aa20.28■□□□□ 0.84
CDK11A-209ENST00000460465 PSMD1Q99460 953 aa20.28■□□□□ 0.84
CDK11A-209ENST00000460465 FAM217BQ9NTX9 383 aaPredicted RBP20.28■□□□□ 0.84
CDK11A-209ENST00000460465 CNPY2Q9Y2B0 182 aa20.28■□□□□ 0.84
CDK11A-209ENST00000460465 KIAA0825Q8IV33 1275 aa20.27■□□□□ 0.84
CDK11A-209ENST00000460465 ZNF654Q8IZM8 581 aa20.27■□□□□ 0.84
CDK11A-209ENST00000460465 GDPD2Q9HCC8 539 aa20.27■□□□□ 0.84
CDK11A-209ENST00000460465 ORC3Q9UBD5 711 aaPredicted RBP20.27■□□□□ 0.84
CDK11A-209ENST00000460465 GSE1Q14687 1217 aa20.27■□□□□ 0.84
CDK11A-209ENST00000460465 PIM2Q9P1W9 311 aa20.27■□□□□ 0.84
CDK11A-209ENST00000460465 DDX49Q9Y6V7 483 aaKnown RBP20.27■□□□□ 0.84
CDK11A-209ENST00000460465 YDJCA8MPS7 323 aa20.26■□□□□ 0.83
CDK11A-209ENST00000460465 CDKL5O76039 1030 aa20.26■□□□□ 0.83
CDK11A-209ENST00000460465 CRKP46108 304 aa20.26■□□□□ 0.83
CDK11A-209ENST00000460465 DNM1Q05193 864 aaKnown RBP20.26■□□□□ 0.83
CDK11A-209ENST00000460465 TSPY2A6NKD2 308 aa20.26■□□□□ 0.83
CDK11A-209ENST00000460465 IFIT1BQ5T764 474 aaKnown RBP20.26■□□□□ 0.83
CDK11A-209ENST00000460465 CPLX2Q6PUV4 134 aaKnown RBP20.26■□□□□ 0.83
CDK11A-209ENST00000460465 GZF1Q9H116 711 aaPredicted RBP20.26■□□□□ 0.83
CDK11A-209ENST00000460465 USP40Q9NVE5 1235 aa20.26■□□□□ 0.83
CDK11A-209ENST00000460465 COL4A5P29400 1685 aa20.25■□□□□ 0.83
CDK11A-209ENST00000460465 NMT2O60551 498 aa20.25■□□□□ 0.83
CDK11A-209ENST00000460465 NCLP19338 710 aaKnown RBP20.25■□□□□ 0.83
CDK11A-209ENST00000460465 PICALMQ13492 652 aa20.25■□□□□ 0.83
CDK11A-209ENST00000460465 NTRK3Q16288 839 aa20.25■□□□□ 0.83
CDK11A-209ENST00000460465 KLHL40Q2TBA0 621 aa20.25■□□□□ 0.83
CDK11A-209ENST00000460465 RCAN1P53805 252 aa20.25■□□□□ 0.83
CDK11A-209ENST00000460465 RESTQ13127 1097 aa20.25■□□□□ 0.83
CDK11A-209ENST00000460465 RTN1Q16799 776 aa20.25■□□□□ 0.83
CDK11A-209ENST00000460465 APOBEC3HQ6NTF7 200 aaKnown RBP20.25■□□□□ 0.83
CDK11A-209ENST00000460465 USP48Q86UV5 1035 aa20.25■□□□□ 0.83
CDK11A-209ENST00000460465 SLC44A5Q8NCS7 719 aa20.25■□□□□ 0.83
CDK11A-209ENST00000460465 MKNK2Q9HBH9 465 aa20.25■□□□□ 0.83
CDK11A-209ENST00000460465 ZNF277Q9NRM2 450 aaPredicted RBP20.25■□□□□ 0.83
CDK11A-209ENST00000460465 WDHD1O75717 1129 aaPredicted RBP20.24■□□□□ 0.83
CDK11A-209ENST00000460465 SOGA3Q5TF21 947 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 CDC42EP5Q6NZY7 148 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 FAM173BQ6P4H8 233 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 NUP133Q8WUM0 1156 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 PHKBQ93100 1093 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 ZDHHC15Q96MV8 337 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 MYH8P13535 1937 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 FER1L6Q2WGJ9 1857 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 NT5C2P49902 561 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 TFAP4Q01664 338 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 GUCY1B3Q02153 619 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 TMEM87AQ8NBN3 555 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 MRIQ9BWK5 157 aa20.24■□□□□ 0.83
CDK11A-209ENST00000460465 DDX4Q9NQI0 724 aaKnown RBP20.24■□□□□ 0.83
CDK11A-209ENST00000460465 PPP1R1BQ9UD71 204 aaPredicted RBP20.24■□□□□ 0.83
CDK11A-209ENST00000460465 PSDA5PKW4 1024 aaPredicted RBP20.23■□□□□ 0.83
CDK11A-209ENST00000460465 C16orf86Q6ZW13 317 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms