RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 PPP1R21Q6ZMI0 780 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 PDZD4Q76G19 769 aaPredicted RBP9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 PPP4R1Q8TF05 950 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 MCM9Q9NXL9 1143 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 IPO11Q9UI26 975 aaKnown RBP9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 CLASP1Q7Z460 1538 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 PCDH11XQ9BZA7 1347 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 PCDH11YQ9BZA8 1340 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 AKR1B15C9JRZ8 316 aaPredicted RBP9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 F13A1P00488 732 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 RAPGEF1Q13905 1077 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 RTCBQ9Y3I0 505 aaKnown RBP9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 TOM1O60784 492 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 ZNF569Q5MCW4 686 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 USHBP1Q8N6Y0 703 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 Q9H521 79 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 TRPM2O94759 1503 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 H0YCG3 227 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 PHBP35232 272 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 SLC9C2Q5TAH2 1124 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 SND1Q7KZF4 910 aaKnown RBP eCLIP9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 SUPT20HQ8NEM7 779 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 CDCA7Q9BWT1 371 aaPredicted RBP9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 AFG3L2Q9Y4W6 797 aa9.87□□□□□ -0.83
SHROOM4-203ENST00000460112 TNFAIP3P21580 790 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 ZCRB1Q8TBF4 217 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 CAPZA3Q96KX2 299 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 AMOTL2Q9Y2J4 779 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 GRIN2AQ12879 1464 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 ATP6V1E1P36543 226 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 ASIC2Q16515 512 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 CCDC122Q5T0U0 273 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 AFAP1L1Q8TED9 768 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 GRM8O00222 908 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 KRBA2Q6ZNG9 492 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 RHPN1Q8TCX5 695 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 IWS1Q96ST2 819 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 CDK13Q14004 1512 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 FLOT1O75955 427 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 MCTP2Q6DN12 878 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 C8orf74Q6P047 294 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 VPS18Q9P253 973 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 REREQ9P2R6 1566 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 GNA14O95837 355 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 TFIP11Q9UBB9 837 aaKnown RBP9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 MED4Q9NPJ6 270 aa9.86□□□□□ -0.83
SHROOM4-203ENST00000460112 KDM5BQ9UGL1 1544 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 F6X3S4 739 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 ZEB2O60315 1214 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 TRIM37O94972 964 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 PCK1P35558 622 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 PRAG1Q86YV5 1406 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 PI4KAP2A4QPH2 592 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 ARMC9Q7Z3E5 817 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 RPAINQ86UA6 219 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 PI4KAP1Q8N8J0 262 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 SDCCAG3Q96C92 435 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 HELLSQ9NRZ9 838 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 MAPKBP1O60336 1514 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 ATP8B1O43520 1251 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 NME9Q86XW9 330 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 GRK7Q8WTQ7 553 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 SEPT10Q9P0V9 454 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 NIP7Q9Y221 180 aaKnown RBP eCLIP9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 FAN1Q9Y2M0 1017 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 SYNMO15061 1565 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 PROCA1Q8NCQ7 364 aaPredicted RBP9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 NOC4LQ9BVI4 516 aaKnown RBP9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 SNRKQ9NRH2 765 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 NAPGQ99747 312 aaPredicted RBP9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 GRM1Q13255 1194 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 SLC4A8Q2Y0W8 1093 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 HHATQ5VTY9 493 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 KSR2Q6VAB6 950 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 CSRNP1Q96S65 589 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 MBIPQ9NS73 344 aa9.85□□□□□ -0.83
SHROOM4-203ENST00000460112 SMIM23A6NLE4 172 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 DNAJC8O75937 253 aaPredicted RBP9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 HOXB7P09629 217 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 SLMAPQ14BN4 828 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 AKAP4Q5JQC9 854 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 CCDC51Q96ER9 411 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 SYNRGQ9UMZ2 1314 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 HSPA8P11142 646 aaKnown RBP9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 HCLS1P14317 486 aaPredicted RBP9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 TMX3Q96JJ7 454 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 RAPGEF3O95398 923 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 DEXIO95424 95 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 CCDC84Q86UT8 332 aaPredicted RBP9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 ANKRD44Q8N8A2 993 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 SPATS2LQ9NUQ6 558 aaKnown RBP9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 TYRO3Q06418 890 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 TCIRG1Q13488 830 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 ISM2Q6H9L7 571 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 MAGEB6Q8N7X4 407 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 ZC3H15Q8WU90 426 aaKnown RBP9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 TACO1Q9BSH4 297 aaKnown RBP9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 RAB17Q9H0T7 212 aa9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 RBM8AQ9Y5S9 174 aaKnown RBP9.84□□□□□ -0.83
SHROOM4-203ENST00000460112 KDM3AQ9Y4C1 1321 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms