RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 HERC5Q9UII4 1024 aaKnown RBP17.27■□□□□ 0.36
THBS3-204ENST00000460050 PALD1Q9ULE6 856 aa17.27■□□□□ 0.36
THBS3-204ENST00000460050 GPR25O00155 361 aa17.26■□□□□ 0.35
THBS3-204ENST00000460050 CTNND1O60716 968 aaKnown RBP17.26■□□□□ 0.35
THBS3-204ENST00000460050 CETPP11597 493 aa17.26■□□□□ 0.35
THBS3-204ENST00000460050 OTUD7AQ8TE49 926 aaPredicted RBP17.26■□□□□ 0.35
THBS3-204ENST00000460050 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
THBS3-204ENST00000460050 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
THBS3-204ENST00000460050 KCNH4Q9UQ05 1017 aa17.26■□□□□ 0.35
THBS3-204ENST00000460050 NAV1Q8NEY1 1877 aa17.26■□□□□ 0.35
THBS3-204ENST00000460050 ATAD5Q96QE3 1844 aa17.26■□□□□ 0.35
THBS3-204ENST00000460050 PTPRAP18433 802 aa17.25■□□□□ 0.35
THBS3-204ENST00000460050 SLC4A8Q2Y0W8 1093 aa17.25■□□□□ 0.35
THBS3-204ENST00000460050 SLFNL1Q499Z3 407 aa17.25■□□□□ 0.35
THBS3-204ENST00000460050 NOM1Q5C9Z4 860 aaKnown RBP17.25■□□□□ 0.35
THBS3-204ENST00000460050 FAM43AQ8N2R8 423 aa17.25■□□□□ 0.35
THBS3-204ENST00000460050 ZNF296Q8WUU4 475 aaPredicted RBP17.25■□□□□ 0.35
THBS3-204ENST00000460050 CRNKL1Q9BZJ0 848 aaKnown RBP17.25■□□□□ 0.35
THBS3-204ENST00000460050 DDX60LQ5H9U9 1706 aaKnown RBP17.24■□□□□ 0.35
THBS3-204ENST00000460050 TTC41PQ6P2S7 1318 aa17.24■□□□□ 0.35
THBS3-204ENST00000460050 PHIPQ8WWQ0 1821 aa17.24■□□□□ 0.35
THBS3-204ENST00000460050 HLA-DOAP06340 250 aa17.24■□□□□ 0.35
THBS3-204ENST00000460050 CRHR2Q13324 411 aa17.24■□□□□ 0.35
THBS3-204ENST00000460050 ANKRD45Q5TZF3 282 aa17.24■□□□□ 0.35
THBS3-204ENST00000460050 METTL16Q86W50 562 aaKnown RBP17.24■□□□□ 0.35
THBS3-204ENST00000460050 CRACR2BQ8N4Y2 399 aaPredicted RBP17.24■□□□□ 0.35
THBS3-204ENST00000460050 DNAJC18Q9H819 358 aa17.24■□□□□ 0.35
THBS3-204ENST00000460050 ZHX2Q9Y6X8 837 aa17.24■□□□□ 0.35
THBS3-204ENST00000460050 PTPRFP10586 1907 aa17.23■□□□□ 0.35
THBS3-204ENST00000460050 BTBD19C9JJ37 291 aa17.23■□□□□ 0.35
THBS3-204ENST00000460050 FKTNO75072 461 aa17.23■□□□□ 0.35
THBS3-204ENST00000460050 CHGBP05060 677 aa17.23■□□□□ 0.35
THBS3-204ENST00000460050 DGKZQ13574 1117 aa17.23■□□□□ 0.35
THBS3-204ENST00000460050 RRP1BQ14684 758 aaKnown RBP17.23■□□□□ 0.35
THBS3-204ENST00000460050 UBE3CQ15386 1083 aa17.23■□□□□ 0.35
THBS3-204ENST00000460050 TAF1CQ15572 869 aaPredicted RBP17.23■□□□□ 0.35
THBS3-204ENST00000460050 ZSCAN25Q6NSZ9 544 aa17.23■□□□□ 0.35
THBS3-204ENST00000460050 CCDC84Q86UT8 332 aaPredicted RBP17.23■□□□□ 0.35
THBS3-204ENST00000460050 FOXP4Q8IVH2 680 aaPredicted RBP17.23■□□□□ 0.35
THBS3-204ENST00000460050 LCORLQ8N3X6 602 aa17.23■□□□□ 0.35
THBS3-204ENST00000460050 TRIM34Q9BYJ4 488 aa17.23■□□□□ 0.35
THBS3-204ENST00000460050 ARMT1Q9H993 441 aa17.23■□□□□ 0.35
THBS3-204ENST00000460050 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
THBS3-204ENST00000460050 CXCL11O14625 94 aa17.22■□□□□ 0.35
THBS3-204ENST00000460050 ERC2O15083 957 aa17.22■□□□□ 0.35
THBS3-204ENST00000460050 MBD4O95243 580 aa17.22■□□□□ 0.35
THBS3-204ENST00000460050 MX1P20591 662 aa17.22■□□□□ 0.35
THBS3-204ENST00000460050 CAP2P40123 477 aa17.22■□□□□ 0.35
THBS3-204ENST00000460050 KBTBD3Q8NAB2 608 aa17.22■□□□□ 0.35
THBS3-204ENST00000460050 PI4K2BQ8TCG2 481 aa17.22■□□□□ 0.35
THBS3-204ENST00000460050 MCOLN1Q9GZU1 580 aa17.22■□□□□ 0.35
THBS3-204ENST00000460050 RWDD1Q9H446 243 aaPredicted RBP17.22■□□□□ 0.35
THBS3-204ENST00000460050 ZCCHC17Q9NP64 241 aaKnown RBP17.22■□□□□ 0.35
THBS3-204ENST00000460050 AFG3L2Q9Y4W6 797 aa17.22■□□□□ 0.35
THBS3-204ENST00000460050 SALL3Q9BXA9 1300 aa17.21■□□□□ 0.35
THBS3-204ENST00000460050 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
THBS3-204ENST00000460050 MOGSQ13724 837 aa17.21■□□□□ 0.35
THBS3-204ENST00000460050 CTU1Q7Z7A3 348 aaKnown RBP17.21■□□□□ 0.35
THBS3-204ENST00000460050 SDR42E1Q8WUS8 393 aa17.21■□□□□ 0.35
THBS3-204ENST00000460050 ZFYVE28Q9HCC9 887 aa17.21■□□□□ 0.35
THBS3-204ENST00000460050 A0A0G2JLL6 359 aaPredicted RBP17.2■□□□□ 0.34
THBS3-204ENST00000460050 TRIM75PA6NK02 468 aa17.2■□□□□ 0.34
THBS3-204ENST00000460050 CAPN15O75808 1086 aa17.2■□□□□ 0.34
THBS3-204ENST00000460050 IRX6P78412 446 aaPredicted RBP17.2■□□□□ 0.34
THBS3-204ENST00000460050 PRRT2Q7Z6L0 340 aaPredicted RBP17.2■□□□□ 0.34
THBS3-204ENST00000460050 ANKRD23Q86SG2 305 aa17.2■□□□□ 0.34
THBS3-204ENST00000460050 TTC6Q86TZ1 520 aa17.2■□□□□ 0.34
THBS3-204ENST00000460050 SMC5Q8IY18 1101 aa17.2■□□□□ 0.34
THBS3-204ENST00000460050 ABHD8Q96I13 439 aa17.2■□□□□ 0.34
THBS3-204ENST00000460050 EHD4Q9H223 541 aa17.2■□□□□ 0.34
THBS3-204ENST00000460050 SERPINB13Q9UIV8 391 aa17.2■□□□□ 0.34
THBS3-204ENST00000460050 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
THBS3-204ENST00000460050 PRKAB2O43741 272 aa17.19■□□□□ 0.34
THBS3-204ENST00000460050 GDF11O95390 407 aa17.19■□□□□ 0.34
THBS3-204ENST00000460050 IGHDP01880 384 aa17.19■□□□□ 0.34
THBS3-204ENST00000460050 POLR3DP05423 398 aaPredicted RBP17.19■□□□□ 0.34
THBS3-204ENST00000460050 PUS7LQ9H0K6 701 aaKnown RBP17.19■□□□□ 0.34
THBS3-204ENST00000460050 DCP1AQ9NPI6 582 aaPredicted RBP17.19■□□□□ 0.34
THBS3-204ENST00000460050 MCM9Q9NXL9 1143 aa17.19■□□□□ 0.34
THBS3-204ENST00000460050 USP17L5A8MUK1 530 aa17.18■□□□□ 0.34
THBS3-204ENST00000460050 PDHXO00330 501 aa17.18■□□□□ 0.34
THBS3-204ENST00000460050 ASNSP08243 561 aa17.18■□□□□ 0.34
THBS3-204ENST00000460050 PLCD1P51178 756 aa17.18■□□□□ 0.34
THBS3-204ENST00000460050 JAG1P78504 1218 aa17.18■□□□□ 0.34
THBS3-204ENST00000460050 SHROOM1Q2M3G4 852 aaPredicted RBP17.18■□□□□ 0.34
THBS3-204ENST00000460050 B4GALNT3Q6L9W6 998 aa17.18■□□□□ 0.34
THBS3-204ENST00000460050 GPAT2Q6NUI2 795 aa17.18■□□□□ 0.34
THBS3-204ENST00000460050 GADL1Q6ZQY3 521 aa17.18■□□□□ 0.34
THBS3-204ENST00000460050 LNPKQ9C0E8 428 aa17.18■□□□□ 0.34
THBS3-204ENST00000460050 ZFYP08048 801 aaPredicted RBP17.17■□□□□ 0.34
THBS3-204ENST00000460050 SP3Q02447 781 aa17.17■□□□□ 0.34
THBS3-204ENST00000460050 EVX2Q03828 476 aa17.17■□□□□ 0.34
THBS3-204ENST00000460050 SPP2Q13103 211 aa17.17■□□□□ 0.34
THBS3-204ENST00000460050 TATDN1Q6P1N9 297 aa17.17■□□□□ 0.34
THBS3-204ENST00000460050 FASTKD5Q7L8L6 764 aaKnown RBP17.17■□□□□ 0.34
THBS3-204ENST00000460050 ZNF280CQ8ND82 737 aa17.17■□□□□ 0.34
THBS3-204ENST00000460050 APPBP2Q92624 585 aa17.17■□□□□ 0.34
THBS3-204ENST00000460050 TBC1D2Q9BYX2 928 aa17.17■□□□□ 0.34
THBS3-204ENST00000460050 ATP8A2Q9NTI2 1148 aa17.17■□□□□ 0.34
THBS3-204ENST00000460050 STAP2Q9UGK3 403 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms