RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 GJA8P48165 433 aa12.11□□□□□ -0.47
SYN3-205ENST00000459990 JAG1P78504 1218 aa12.11□□□□□ -0.47
SYN3-205ENST00000459990 POLA2Q14181 598 aa12.11□□□□□ -0.47
SYN3-205ENST00000459990 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
SYN3-205ENST00000459990 FASTKD5Q7L8L6 764 aaKnown RBP12.11□□□□□ -0.47
SYN3-205ENST00000459990 SLF2Q8IX21 1173 aa12.11□□□□□ -0.47
SYN3-205ENST00000459990 SH3RF3Q8TEJ3 882 aaPredicted RBP12.11□□□□□ -0.47
SYN3-205ENST00000459990 DBNDD2Q9BQY9 259 aa12.11□□□□□ -0.47
SYN3-205ENST00000459990 UNC93B1Q9H1C4 597 aa12.11□□□□□ -0.47
SYN3-205ENST00000459990 C1orf115Q9H7X2 142 aa12.11□□□□□ -0.47
SYN3-205ENST00000459990 SLC45A1Q9Y2W3 748 aa12.11□□□□□ -0.47
SYN3-205ENST00000459990 TBC1D12O60347 775 aa12.1□□□□□ -0.47
SYN3-205ENST00000459990 GJB1P08034 283 aa12.1□□□□□ -0.47
SYN3-205ENST00000459990 RLBP1P12271 317 aa12.1□□□□□ -0.47
SYN3-205ENST00000459990 FLT3LGP49771 235 aa12.1□□□□□ -0.47
SYN3-205ENST00000459990 ANKRD13CQ8N6S4 541 aa12.1□□□□□ -0.47
SYN3-205ENST00000459990 SLAIN1Q8ND83 568 aa12.1□□□□□ -0.47
SYN3-205ENST00000459990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.1□□□□□ -0.47
SYN3-205ENST00000459990 SNRKQ9NRH2 765 aa12.1□□□□□ -0.47
SYN3-205ENST00000459990 TLR7Q9NYK1 1049 aaKnown RBP12.1□□□□□ -0.47
SYN3-205ENST00000459990 RAI14Q9P0K7 980 aa12.1□□□□□ -0.47
SYN3-205ENST00000459990 PEX10O60683 326 aa12.09□□□□□ -0.47
SYN3-205ENST00000459990 INHAP05111 366 aa12.09□□□□□ -0.47
SYN3-205ENST00000459990 CYP2E1P05181 493 aaPredicted RBP12.09□□□□□ -0.47
SYN3-205ENST00000459990 HOXD10P28358 340 aa12.09□□□□□ -0.47
SYN3-205ENST00000459990 HMGCS2P54868 508 aa12.09□□□□□ -0.47
SYN3-205ENST00000459990 TNNI3KQ59H18 835 aa12.09□□□□□ -0.47
SYN3-205ENST00000459990 TEX11Q8IYF3 940 aa12.09□□□□□ -0.47
SYN3-205ENST00000459990 SSH3Q8TE77 659 aa12.09□□□□□ -0.47
SYN3-205ENST00000459990 RNF208Q9H0X6 261 aa12.09□□□□□ -0.47
SYN3-205ENST00000459990 AATFQ9NY61 560 aaKnown RBP eCLIP12.09□□□□□ -0.47
SYN3-205ENST00000459990 FPGT-TNNI3KV9GXZ4 949 aa12.09□□□□□ -0.47
SYN3-205ENST00000459990 FLT1P17948 1338 aa12.09□□□□□ -0.47
SYN3-205ENST00000459990 TNPO2O14787 897 aaKnown RBP12.08□□□□□ -0.48
SYN3-205ENST00000459990 ADCY3O60266 1144 aa12.08□□□□□ -0.48
SYN3-205ENST00000459990 CAP2P40123 477 aa12.08□□□□□ -0.48
SYN3-205ENST00000459990 SPP2Q13103 211 aa12.08□□□□□ -0.48
SYN3-205ENST00000459990 IRF5Q13568 498 aa12.08□□□□□ -0.48
SYN3-205ENST00000459990 FAM110CQ1W6H9 321 aa12.08□□□□□ -0.48
SYN3-205ENST00000459990 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
SYN3-205ENST00000459990 PROCA1Q8NCQ7 364 aaPredicted RBP12.08□□□□□ -0.48
SYN3-205ENST00000459990 SMCR8Q8TEV9 937 aaPredicted RBP12.08□□□□□ -0.48
SYN3-205ENST00000459990 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
SYN3-205ENST00000459990 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
SYN3-205ENST00000459990 UQCRFS1P1P0C7P4 283 aa12.07□□□□□ -0.48
SYN3-205ENST00000459990 ZAP70P43403 619 aa12.07□□□□□ -0.48
SYN3-205ENST00000459990 GSTO1P78417 241 aa12.07□□□□□ -0.48
SYN3-205ENST00000459990 G3BP1Q13283 466 aaKnown RBP eCLIP12.07□□□□□ -0.48
SYN3-205ENST00000459990 SH3D19Q5HYK7 790 aa12.07□□□□□ -0.48
SYN3-205ENST00000459990 GORABQ5T7V8 394 aa12.07□□□□□ -0.48
SYN3-205ENST00000459990 MAPKAPK5Q8IW41 473 aa12.07□□□□□ -0.48
SYN3-205ENST00000459990 ZNF280CQ8ND82 737 aa12.07□□□□□ -0.48
SYN3-205ENST00000459990 PRO3102Q9H379 93 aa12.07□□□□□ -0.48
SYN3-205ENST00000459990 GPR108Q9NPR9 543 aa12.07□□□□□ -0.48
SYN3-205ENST00000459990 PIH1D3Q9NQM4 214 aaKnown RBP12.07□□□□□ -0.48
SYN3-205ENST00000459990 PAK6Q9NQU5 681 aaPredicted RBP12.07□□□□□ -0.48
SYN3-205ENST00000459990 LRP2BPQ9P2M1 347 aa12.07□□□□□ -0.48
SYN3-205ENST00000459990 DBNLQ9UJU6 430 aaKnown RBP12.07□□□□□ -0.48
SYN3-205ENST00000459990 NDUFB9Q9Y6M9 179 aa12.07□□□□□ -0.48
SYN3-205ENST00000459990 FARP2O94887 1054 aaPredicted RBP12.06□□□□□ -0.48
SYN3-205ENST00000459990 GDF11O95390 407 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 MAP4K4O95819 1239 aaPredicted RBP12.06□□□□□ -0.48
SYN3-205ENST00000459990 LDHCP07864 332 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 DYNLL1P63167 89 aaKnown RBP12.06□□□□□ -0.48
SYN3-205ENST00000459990 UBXN2AP68543 259 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 TRIM32Q13049 653 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 MTMR2Q13614 643 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 TTC39AQ5SRH9 613 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 ZKSCAN2Q63HK3 967 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 NAA16Q6N069 864 aaPredicted RBP12.06□□□□□ -0.48
SYN3-205ENST00000459990 POTEEQ6S8J3 1075 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 METTL16Q86W50 562 aaKnown RBP12.06□□□□□ -0.48
SYN3-205ENST00000459990 NKX2-3Q8TAU0 364 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 PXYLP1Q8TE99 480 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 TGFBRAP1Q8WUH2 860 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 ASCC2Q9H1I8 757 aaPredicted RBP12.06□□□□□ -0.48
SYN3-205ENST00000459990 RBM27Q9P2N5 1060 aaKnown RBP12.06□□□□□ -0.48
SYN3-205ENST00000459990 BIN2Q9UBW5 565 aaPredicted RBP12.06□□□□□ -0.48
SYN3-205ENST00000459990 A0A0G2JMZ2 1700 aa12.06□□□□□ -0.48
SYN3-205ENST00000459990 MYH8P13535 1937 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 PARP14Q460N5 1801 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 USP17L5A8MUK1 530 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 SGPL1O95470 568 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 PPP4CP60510 307 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 ATP8B2P98198 1209 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 DIS3LQ8TF46 1054 aaKnown RBP12.05□□□□□ -0.48
SYN3-205ENST00000459990 DPF3Q92784 378 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 EAF2Q96CJ1 260 aaPredicted RBP12.05□□□□□ -0.48
SYN3-205ENST00000459990 DEFB118Q96PH6 123 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 TXNRD2Q9NNW7 524 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 HERC5Q9UII4 1024 aaKnown RBP12.05□□□□□ -0.48
SYN3-205ENST00000459990 PNMA3Q9UL41 463 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 PALD1Q9ULE6 856 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 RLFQ13129 1914 aa12.05□□□□□ -0.48
SYN3-205ENST00000459990 COL6A3P12111 3177 aa12.04□□□□□ -0.48
SYN3-205ENST00000459990 ZBTB7BO15156 539 aaPredicted RBP12.04□□□□□ -0.48
SYN3-205ENST00000459990 SURF6O75683 361 aaKnown RBP12.04□□□□□ -0.48
SYN3-205ENST00000459990 ZNF512BQ96KM6 892 aaPredicted RBP12.04□□□□□ -0.48
SYN3-205ENST00000459990 WDR18Q9BV38 432 aa12.04□□□□□ -0.48
SYN3-205ENST00000459990 CRISPLD2Q9H0B8 497 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms