RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 COL16A1Q07092 1604 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-202ENST00000459727 ZSCAN12O43309 604 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 CAMTA2O94983 1202 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 NTSR2O95665 410 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 SERPINC1P01008 464 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 PTPREP23469 700 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 GTF2E1P29083 439 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-202ENST00000459727 CDC27P30260 824 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 CRKLP46109 303 aaKnown RBP10.15□□□□□ -0.78
HDAC3-202ENST00000459727 PPARAQ07869 468 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 SEMA3FQ13275 785 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 DDB1Q16531 1140 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 CCDC178Q5BJE1 867 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 NT5DC1Q5TFE4 455 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 SUSD4Q5VX71 490 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 CATIPQ7Z7H3 387 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 CERS3Q8IU89 383 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 ANKRD18AQ8IVF6 992 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 ZNF654Q8IZM8 581 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 FERMT2Q96AC1 680 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 SLC4A9Q96Q91 983 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 XPO4Q9C0E2 1151 aaKnown RBP10.15□□□□□ -0.78
HDAC3-202ENST00000459727 EPB41L4AQ9HCS5 686 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-202ENST00000459727 IFNKQ9P0W0 207 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 PHLPP1O60346 1717 aa10.15□□□□□ -0.78
HDAC3-202ENST00000459727 BCORQ6W2J9 1755 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 MROH7-TTC4A0A0A0MT08 1334 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 LOC102724428A0A0B4J2F2 783 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 MAGEB6P1A0A0J9YX57 407 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 TPM1P09493 284 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 ERCC5P28715 1186 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-202ENST00000459727 ATP6V1AP38606 617 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 TRAPPC10P48553 1259 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 SIK1P57059 783 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 FANCCQ00597 558 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 NCAPHQ15003 741 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 SF3B3Q15393 1217 aaKnown RBP10.14□□□□□ -0.79
HDAC3-202ENST00000459727 OTUD7BQ6GQQ9 843 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 INTS5Q6P9B9 1019 aaKnown RBP10.14□□□□□ -0.79
HDAC3-202ENST00000459727 SHC4Q6S5L8 630 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 BARGINQ6ZT62 677 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 TMC6Q7Z403 805 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 NUTM2AQ8IVF1 878 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-202ENST00000459727 DIS3L2Q8IYB7 885 aaKnown RBP10.14□□□□□ -0.79
HDAC3-202ENST00000459727 CRACR2BQ8N4Y2 399 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-202ENST00000459727 FANCBQ8NB91 859 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 SMARCE1Q969G3 411 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 NYXQ9GZU5 481 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 ARMT1Q9H993 441 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 TOMM22Q9NS69 142 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 FAM217BQ9NTX9 383 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-202ENST00000459727 IQSEC3Q9UPP2 1182 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-202ENST00000459727 NIP7Q9Y221 180 aaKnown RBP eCLIP10.14□□□□□ -0.79
HDAC3-202ENST00000459727 SRPRBQ9Y5M8 271 aaKnown RBP10.14□□□□□ -0.79
HDAC3-202ENST00000459727 BCL9LQ86UU0 1499 aa10.14□□□□□ -0.79
HDAC3-202ENST00000459727 SPATA31A1Q5TZJ5 1347 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 PHLPP2Q6ZVD8 1323 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 TRIM75PA6NK02 468 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 RANBP6O60518 1105 aaKnown RBP10.13□□□□□ -0.79
HDAC3-202ENST00000459727 WDHD1O75717 1129 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-202ENST00000459727 SLU7O95391 586 aaKnown RBP10.13□□□□□ -0.79
HDAC3-202ENST00000459727 TOP1P11387 765 aaKnown RBP10.13□□□□□ -0.79
HDAC3-202ENST00000459727 CYP7A1P22680 504 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 MARCKSP29966 332 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-202ENST00000459727 KRT2P35908 639 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 UBASH3AP57075 661 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 CHRNDQ07001 517 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 POSTNQ15063 836 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 NBPF11Q86T75 865 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 LCORLQ8N3X6 602 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 ENOX1Q8TC92 643 aaKnown RBP10.13□□□□□ -0.79
HDAC3-202ENST00000459727 PHKBQ93100 1093 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 ANKRD2Q9GZV1 360 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 BSDC1Q9NW68 430 aaPredicted RBP10.13□□□□□ -0.79
HDAC3-202ENST00000459727 AATFQ9NY61 560 aaKnown RBP eCLIP10.13□□□□□ -0.79
HDAC3-202ENST00000459727 CHD4Q14839 1912 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 NRAPQ86VF7 1730 aa10.13□□□□□ -0.79
HDAC3-202ENST00000459727 CNTNAP4Q9C0A0 1308 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 ARHGAP6O43182 974 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 PRPF3O43395 683 aaKnown RBP10.12□□□□□ -0.79
HDAC3-202ENST00000459727 FGRP09769 529 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 TUBB4BP68371 445 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 FAM193AP78312 1265 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 CFAP100Q494V2 611 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 SPTY2D1Q68D10 685 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-202ENST00000459727 CREBRFQ8IUR6 639 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 VSTM4Q8IW00 320 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 ZNF710Q8N1W2 664 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 SYNE4Q8N205 404 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 ZNF397Q8NF99 534 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-202ENST00000459727 CTAGE1Q96RT6 745 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 ZSCAN10Q96SZ4 725 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-202ENST00000459727 GTPBP4Q9BZE4 634 aaKnown RBP10.12□□□□□ -0.79
HDAC3-202ENST00000459727 ATP8A2Q9NTI2 1148 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 ARPP21Q9UBL0 812 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-202ENST00000459727 FBXO2Q9UK22 296 aaPredicted RBP10.12□□□□□ -0.79
HDAC3-202ENST00000459727 DUOX1Q9NRD9 1551 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 ROBO1Q9Y6N7 1651 aa10.12□□□□□ -0.79
HDAC3-202ENST00000459727 MAST2Q6P0Q8 1798 aa10.11□□□□□ -0.79
HDAC3-202ENST00000459727 TNKSO95271 1327 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms