RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 HHIPL2Q6UWX4 724 aa20.63■□□□□ 0.89
SF3B4-202ENST00000457312 SLC39A5Q6ZMH5 540 aa20.63■□□□□ 0.89
SF3B4-202ENST00000457312 LPAR1Q92633 364 aa20.63■□□□□ 0.89
SF3B4-202ENST00000457312 MBIPQ9NS73 344 aa20.63■□□□□ 0.89
SF3B4-202ENST00000457312 DDX20Q9UHI6 824 aaKnown RBP20.63■□□□□ 0.89
SF3B4-202ENST00000457312 WDFY4Q6ZS81 3184 aa20.62■□□□□ 0.89
SF3B4-202ENST00000457312 NHLH1Q02575 133 aa20.62■□□□□ 0.89
SF3B4-202ENST00000457312 IFIT5Q13325 482 aaKnown RBP20.62■□□□□ 0.89
SF3B4-202ENST00000457312 APBA2Q99767 749 aa20.62■□□□□ 0.89
SF3B4-202ENST00000457312 ASCC2Q9H1I8 757 aaPredicted RBP20.62■□□□□ 0.89
SF3B4-202ENST00000457312 FAM198AQ9UFP1 575 aa20.62■□□□□ 0.89
SF3B4-202ENST00000457312 TRIM35Q9UPQ4 493 aa20.62■□□□□ 0.89
SF3B4-202ENST00000457312 UBE4AQ14139 1066 aa20.61■□□□□ 0.89
SF3B4-202ENST00000457312 GCKRQ14397 625 aa20.61■□□□□ 0.89
SF3B4-202ENST00000457312 PEX10O60683 326 aa20.6■□□□□ 0.89
SF3B4-202ENST00000457312 IGFBP4P22692 258 aa20.6■□□□□ 0.89
SF3B4-202ENST00000457312 PBX2P40425 430 aa20.6■□□□□ 0.89
SF3B4-202ENST00000457312 RGS2P41220 211 aa20.6■□□□□ 0.89
SF3B4-202ENST00000457312 NEUROD2Q15784 382 aa20.6■□□□□ 0.89
SF3B4-202ENST00000457312 CDC42EP5Q6NZY7 148 aa20.6■□□□□ 0.89
SF3B4-202ENST00000457312 ZFPM1Q8IX07 1006 aa20.6■□□□□ 0.89
SF3B4-202ENST00000457312 PBX4Q9BYU1 374 aa20.6■□□□□ 0.89
SF3B4-202ENST00000457312 PRRC2BQ5JSZ5 2229 aaKnown RBP20.59■□□□□ 0.89
SF3B4-202ENST00000457312 AAK1Q2M2I8 961 aa20.59■□□□□ 0.89
SF3B4-202ENST00000457312 ZNF594Q96JF6 807 aaPredicted RBP20.59■□□□□ 0.89
SF3B4-202ENST00000457312 TSPYL2Q9H2G4 693 aaPredicted RBP20.59■□□□□ 0.89
SF3B4-202ENST00000457312 CLSPNQ9HAW4 1339 aa20.58■□□□□ 0.89
SF3B4-202ENST00000457312 SMIM22K7EJ46 135 aa20.58■□□□□ 0.89
SF3B4-202ENST00000457312 ELL2O00472 640 aaPredicted RBP20.58■□□□□ 0.89
SF3B4-202ENST00000457312 MSCO60682 206 aa20.58■□□□□ 0.89
SF3B4-202ENST00000457312 MORN1Q5T089 497 aa20.58■□□□□ 0.89
SF3B4-202ENST00000457312 GJC2Q5T442 439 aaPredicted RBP20.58■□□□□ 0.89
SF3B4-202ENST00000457312 TXNRD2Q9NNW7 524 aa20.58■□□□□ 0.89
SF3B4-202ENST00000457312 SLURP2P0DP57 97 aa20.57■□□□□ 0.88
SF3B4-202ENST00000457312 LDHAL6AQ6ZMR3 332 aa20.57■□□□□ 0.88
SF3B4-202ENST00000457312 FBXO33Q7Z6M2 555 aa20.57■□□□□ 0.88
SF3B4-202ENST00000457312 SUGT1Q9Y2Z0 365 aa20.57■□□□□ 0.88
SF3B4-202ENST00000457312 CHMP3Q9Y3E7 222 aa20.57■□□□□ 0.88
SF3B4-202ENST00000457312 ZNF318Q5VUA4 2279 aa20.57■□□□□ 0.88
SF3B4-202ENST00000457312 BRWD1Q9NSI6 2320 aa20.56■□□□□ 0.88
SF3B4-202ENST00000457312 CFAP54Q96N23 3096 aa20.56■□□□□ 0.88
SF3B4-202ENST00000457312 CTNND1O60716 968 aaKnown RBP20.56■□□□□ 0.88
SF3B4-202ENST00000457312 FOXO4P98177 505 aa20.56■□□□□ 0.88
SF3B4-202ENST00000457312 FPGSQ05932 587 aa20.56■□□□□ 0.88
SF3B4-202ENST00000457312 PABPC4Q13310 644 aaKnown RBP eCLIP20.56■□□□□ 0.88
SF3B4-202ENST00000457312 CNNM1Q9NRU3 951 aa20.56■□□□□ 0.88
SF3B4-202ENST00000457312 FLRT1Q9NZU1 646 aa20.56■□□□□ 0.88
SF3B4-202ENST00000457312 LRRFIP2Q9Y608 721 aaKnown RBP20.56■□□□□ 0.88
SF3B4-202ENST00000457312 UTYO14607 1347 aa20.55■□□□□ 0.88
SF3B4-202ENST00000457312 GRXCR1A8MXD5 290 aa20.55■□□□□ 0.88
SF3B4-202ENST00000457312 MAPK4P31152 587 aa20.55■□□□□ 0.88
SF3B4-202ENST00000457312 HMGCS2P54868 508 aa20.55■□□□□ 0.88
SF3B4-202ENST00000457312 MAP3K10Q02779 954 aa20.55■□□□□ 0.88
SF3B4-202ENST00000457312 GPR142Q7Z601 462 aa20.55■□□□□ 0.88
SF3B4-202ENST00000457312 TRANK1O15050 2925 aa20.55■□□□□ 0.88
SF3B4-202ENST00000457312 C1orf53Q5VUE5 145 aa20.54■□□□□ 0.88
SF3B4-202ENST00000457312 VPS37DQ86XT2 251 aa20.54■□□□□ 0.88
SF3B4-202ENST00000457312 PORCNQ9H237 461 aa20.54■□□□□ 0.88
SF3B4-202ENST00000457312 RFX7Q2KHR2 1363 aa20.54■□□□□ 0.88
SF3B4-202ENST00000457312 PRR33A8MZF0 331 aa20.53■□□□□ 0.88
SF3B4-202ENST00000457312 KBTBD13C9JR72 458 aa20.53■□□□□ 0.88
SF3B4-202ENST00000457312 ERC2O15083 957 aa20.53■□□□□ 0.88
SF3B4-202ENST00000457312 FRAT2O75474 233 aaPredicted RBP20.53■□□□□ 0.88
SF3B4-202ENST00000457312 TLE2Q04725 743 aa20.53■□□□□ 0.88
SF3B4-202ENST00000457312 MFSD14CQ5VZR4 134 aa20.53■□□□□ 0.88
SF3B4-202ENST00000457312 SH3BP5LQ7L8J4 393 aa20.53■□□□□ 0.88
SF3B4-202ENST00000457312 GPRC5AQ8NFJ5 357 aa20.53■□□□□ 0.88
SF3B4-202ENST00000457312 USP34Q70CQ2 3546 aa20.52■□□□□ 0.88
SF3B4-202ENST00000457312 PI4K2BG5E9Z4 385 aa20.52■□□□□ 0.88
SF3B4-202ENST00000457312 KIAA0355O15063 1070 aa20.52■□□□□ 0.88
SF3B4-202ENST00000457312 CLTBP09497 229 aa20.52■□□□□ 0.88
SF3B4-202ENST00000457312 CNGA1P29973 690 aa20.52■□□□□ 0.88
SF3B4-202ENST00000457312 SPP2Q13103 211 aa20.52■□□□□ 0.88
SF3B4-202ENST00000457312 CCDC30Q5VVM6 783 aa20.52■□□□□ 0.88
SF3B4-202ENST00000457312 CCDC129Q6ZRS4 1044 aa20.52■□□□□ 0.88
SF3B4-202ENST00000457312 MICALL1Q8N3F8 863 aa20.52■□□□□ 0.88
SF3B4-202ENST00000457312 TRPV1Q8NER1 839 aa20.52■□□□□ 0.88
SF3B4-202ENST00000457312 MYBBP1AQ9BQG0 1328 aaKnown RBP20.52■□□□□ 0.87
SF3B4-202ENST00000457312 SPTBN4Q9H254 2564 aa20.51■□□□□ 0.87
SF3B4-202ENST00000457312 ZNF853P0CG23 659 aa20.51■□□□□ 0.87
SF3B4-202ENST00000457312 DIXDC1Q155Q3 683 aa20.51■□□□□ 0.87
SF3B4-202ENST00000457312 TAF7LQ5H9L4 462 aa20.51■□□□□ 0.87
SF3B4-202ENST00000457312 PLEKHH3Q7Z736 793 aa20.51■□□□□ 0.87
SF3B4-202ENST00000457312 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.51■□□□□ 0.87
SF3B4-202ENST00000457312 TACC3Q9Y6A5 838 aa20.51■□□□□ 0.87
SF3B4-202ENST00000457312 RAG1P15918 1043 aa20.5■□□□□ 0.87
SF3B4-202ENST00000457312 RGS3P49796 1198 aa20.5■□□□□ 0.87
SF3B4-202ENST00000457312 IRX3P78415 501 aaPredicted RBP20.5■□□□□ 0.87
SF3B4-202ENST00000457312 MAP2K5Q13163 448 aa20.5■□□□□ 0.87
SF3B4-202ENST00000457312 C8orf58Q8NAV2 365 aa20.5■□□□□ 0.87
SF3B4-202ENST00000457312 ARRDC4Q8NCT1 418 aa20.5■□□□□ 0.87
SF3B4-202ENST00000457312 ZNF280CQ8ND82 737 aa20.5■□□□□ 0.87
SF3B4-202ENST00000457312 MYH16Q9H6N6 1097 aa20.5■□□□□ 0.87
SF3B4-202ENST00000457312 MYH2Q9UKX2 1941 aa20.5■□□□□ 0.87
SF3B4-202ENST00000457312 TLL1O43897 1013 aa20.49■□□□□ 0.87
SF3B4-202ENST00000457312 HERVK_113P62684 666 aa20.49■□□□□ 0.87
SF3B4-202ENST00000457312 CCDC57Q2TAC2 916 aa20.49■□□□□ 0.87
SF3B4-202ENST00000457312 RASIP1Q5U651 963 aa20.49■□□□□ 0.87
SF3B4-202ENST00000457312 LMBR1LQ6UX01 489 aa20.49■□□□□ 0.87
SF3B4-202ENST00000457312 CCDC146Q8IYE0 955 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms