RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 FXR1P51114 621 aaKnown RBP eCLIP11.73□□□□□ -0.53
CLIP4-208ENST00000456385 MICU3Q86XE3 530 aa11.73□□□□□ -0.53
CLIP4-208ENST00000456385 KRI1Q8N9T8 703 aaKnown RBP11.73□□□□□ -0.53
CLIP4-208ENST00000456385 MYL10Q9BUA6 226 aa11.73□□□□□ -0.53
CLIP4-208ENST00000456385 PUS7LQ9H0K6 701 aaKnown RBP11.73□□□□□ -0.53
CLIP4-208ENST00000456385 BRMS1Q9HCU9 246 aa11.73□□□□□ -0.53
CLIP4-208ENST00000456385 LMO7Q8WWI1 1683 aa11.73□□□□□ -0.53
CLIP4-208ENST00000456385 COBLO75128 1261 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 PPFIA4O75335 1185 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 KCNA4P22459 653 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 AKAP17AQ02040 695 aaKnown RBP11.72□□□□□ -0.53
CLIP4-208ENST00000456385 NT5DC1Q5TFE4 455 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 USP49Q70CQ1 688 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 OSCARQ8IYS5 282 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 NAPGQ99747 312 aaPredicted RBP11.72□□□□□ -0.53
CLIP4-208ENST00000456385 MED4Q9NPJ6 270 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 HOOK1Q9UJC3 728 aaKnown RBP11.72□□□□□ -0.53
CLIP4-208ENST00000456385 MFAP3LO75121 409 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 PRPF6O94906 941 aaKnown RBP11.72□□□□□ -0.53
CLIP4-208ENST00000456385 GYPCP04921 128 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 CASP1P29466 404 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 FAM69CQ0P6D2 419 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 CYB5R4Q7L1T6 521 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 LRP10Q7Z4F1 713 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 MICALL1Q8N3F8 863 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 GPATCH11Q8N954 259 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 AFAP1L1Q8TED9 768 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 LTN1O94822 1766 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 NWD2Q9ULI1 1742 aa11.72□□□□□ -0.53
CLIP4-208ENST00000456385 ZMYM6O95789 1325 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 BTBD18B2RXH4 712 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 RNF225M0QZC1 329 aaPredicted RBP11.71□□□□□ -0.53
CLIP4-208ENST00000456385 ZNF213O14771 459 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 RANBP6O60518 1105 aaKnown RBP11.71□□□□□ -0.53
CLIP4-208ENST00000456385 ZMYND10O75800 440 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 CD44P16070 742 aaKnown RBP11.71□□□□□ -0.53
CLIP4-208ENST00000456385 CDC25AP30304 524 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 PBX1P40424 430 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 TOB1P50616 345 aaPredicted RBP11.71□□□□□ -0.53
CLIP4-208ENST00000456385 CASP7P55210 303 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 ERVK-24P63145 666 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 PIP4K2BP78356 416 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 FOXO4P98177 505 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 EFCAB13Q8IY85 973 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 SMYD4Q8IYR2 804 aaPredicted RBP11.71□□□□□ -0.53
CLIP4-208ENST00000456385 ZNF496Q96IT1 587 aaPredicted RBP11.71□□□□□ -0.53
CLIP4-208ENST00000456385 NCAPGQ9BPX3 1015 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 NAA15Q9BXJ9 866 aaKnown RBP11.71□□□□□ -0.53
CLIP4-208ENST00000456385 NBPF3Q9H094 633 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 GBP3Q9H0R5 595 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 DEF6Q9H4E7 631 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 TRIM10Q9UDY6 481 aa11.71□□□□□ -0.53
CLIP4-208ENST00000456385 ADD3Q9UEY8 706 aaKnown RBP11.71□□□□□ -0.53
CLIP4-208ENST00000456385 ENC1O14682 589 aa11.71□□□□□ -0.54
CLIP4-208ENST00000456385 ARHGAP25P42331 645 aa11.71□□□□□ -0.54
CLIP4-208ENST00000456385 PLCD1P51178 756 aa11.71□□□□□ -0.54
CLIP4-208ENST00000456385 TRDNQ13061 729 aa11.71□□□□□ -0.54
CLIP4-208ENST00000456385 WHAMMP3Q1A5X7 153 aa11.71□□□□□ -0.54
CLIP4-208ENST00000456385 DNAJC21Q5F1R6 531 aaKnown RBP11.71□□□□□ -0.54
CLIP4-208ENST00000456385 TADA2BQ86TJ2 420 aa11.71□□□□□ -0.54
CLIP4-208ENST00000456385 PUS3Q9BZE2 481 aaKnown RBP11.71□□□□□ -0.54
CLIP4-208ENST00000456385 RABEP2Q9H5N1 569 aa11.71□□□□□ -0.54
CLIP4-208ENST00000456385 HDAC6Q9UBN7 1215 aa11.71□□□□□ -0.54
CLIP4-208ENST00000456385 MYO6Q9UM54 1294 aa11.71□□□□□ -0.54
CLIP4-208ENST00000456385 ANGEL1Q9UNK9 670 aaKnown RBP11.71□□□□□ -0.54
CLIP4-208ENST00000456385 UBR1Q8IWV7 1749 aa11.71□□□□□ -0.54
CLIP4-208ENST00000456385 UBN2Q6ZU65 1347 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 EXOC5O00471 708 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 AMPD2Q01433 879 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 SCARF1Q14162 830 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 WDR93Q6P2C0 686 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 PI16Q6UXB8 463 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 KAT2BQ92831 832 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 FBXO2Q9UK22 296 aaPredicted RBP11.7□□□□□ -0.54
CLIP4-208ENST00000456385 ZC3H4Q9UPT8 1303 aaKnown RBP11.7□□□□□ -0.54
CLIP4-208ENST00000456385 SRGAP2O75044 1071 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 GUCY1A2P33402 732 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 CCT6AP40227 531 aaKnown RBP11.7□□□□□ -0.54
CLIP4-208ENST00000456385 AARSP49588 968 aaKnown RBP eCLIP11.7□□□□□ -0.54
CLIP4-208ENST00000456385 TUBB2AQ13885 445 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 TRIM29Q14134 588 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 NTRK3Q16288 839 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 APOA5Q6Q788 366 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 GSPT2Q8IYD1 628 aaKnown RBP11.7□□□□□ -0.54
CLIP4-208ENST00000456385 MYCBPQ99417 103 aaPredicted RBP11.7□□□□□ -0.54
CLIP4-208ENST00000456385 HINFPQ9BQA5 517 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 SLF1Q9BQI6 1058 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 TUBB2BQ9BVA1 445 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 EHD4Q9H223 541 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 ACBD3Q9H3P7 528 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 INCENPQ9NQS7 918 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 HPCAL4Q9UM19 191 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 KCNJ14Q9UNX9 436 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 TTF2Q9UNY4 1162 aaKnown RBP11.7□□□□□ -0.54
CLIP4-208ENST00000456385 CPDO75976 1380 aa11.7□□□□□ -0.54
CLIP4-208ENST00000456385 ACTN4O43707 911 aaKnown RBP11.69□□□□□ -0.54
CLIP4-208ENST00000456385 CPP00450 1065 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 ADORA1P30542 326 aa11.69□□□□□ -0.54
CLIP4-208ENST00000456385 GGCXP38435 758 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms