RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 PHIPQ8WWQ0 1821 aa15.31■□□□□ 0.04
TRA2B-206ENST00000456380 SPP2Q13103 211 aa15.31■□□□□ 0.04
TRA2B-206ENST00000456380 RRP1BQ14684 758 aaKnown RBP15.31■□□□□ 0.04
TRA2B-206ENST00000456380 OSBPL5Q9H0X9 879 aaPredicted RBP15.31■□□□□ 0.04
TRA2B-206ENST00000456380 PTPRFP10586 1907 aa15.31■□□□□ 0.04
TRA2B-206ENST00000456380 DOCK1Q14185 1865 aa15.3■□□□□ 0.04
TRA2B-206ENST00000456380 LDHCP07864 332 aa15.3■□□□□ 0.04
TRA2B-206ENST00000456380 ARID4AP29374 1257 aaPredicted RBP15.3■□□□□ 0.04
TRA2B-206ENST00000456380 GSTO1P78417 241 aa15.3■□□□□ 0.04
TRA2B-206ENST00000456380 PROCA1Q8NCQ7 364 aaPredicted RBP15.3■□□□□ 0.04
TRA2B-206ENST00000456380 DEFB118Q96PH6 123 aa15.3■□□□□ 0.04
TRA2B-206ENST00000456380 MAP4K4O95819 1239 aaPredicted RBP15.29■□□□□ 0.04
TRA2B-206ENST00000456380 TFRCP02786 760 aaKnown RBP15.29■□□□□ 0.04
TRA2B-206ENST00000456380 FAM110CQ1W6H9 321 aa15.29■□□□□ 0.04
TRA2B-206ENST00000456380 GORABQ5T7V8 394 aa15.29■□□□□ 0.04
TRA2B-206ENST00000456380 ZNF280CQ8ND82 737 aa15.29■□□□□ 0.04
TRA2B-206ENST00000456380 COA7Q96BR5 231 aa15.29■□□□□ 0.04
TRA2B-206ENST00000456380 PAK6Q9NQU5 681 aaPredicted RBP15.29■□□□□ 0.04
TRA2B-206ENST00000456380 RAI14Q9P0K7 980 aa15.29■□□□□ 0.04
TRA2B-206ENST00000456380 PNMA3Q9UL41 463 aa15.29■□□□□ 0.04
TRA2B-206ENST00000456380 TAOK2Q9UL54 1235 aa15.29■□□□□ 0.04
TRA2B-206ENST00000456380 TNNQ9UQP3 1299 aa15.29■□□□□ 0.04
TRA2B-206ENST00000456380 NR2E3Q9Y5X4 410 aa15.29■□□□□ 0.04
TRA2B-206ENST00000456380 DNAH12Q6ZR08 3092 aa15.29■□□□□ 0.04
TRA2B-206ENST00000456380 PNMA6EA0A0J9YXQ4 647 aa15.28■□□□□ 0.04
TRA2B-206ENST00000456380 ZBTB7BO15156 539 aaPredicted RBP15.28■□□□□ 0.04
TRA2B-206ENST00000456380 CAP2P40123 477 aa15.28■□□□□ 0.04
TRA2B-206ENST00000456380 MCAMP43121 646 aa15.28■□□□□ 0.04
TRA2B-206ENST00000456380 DOCK3Q8IZD9 2030 aa15.28■□□□□ 0.04
TRA2B-206ENST00000456380 LAMA2P24043 3122 aaKnown RBP15.28■□□□□ 0.04
TRA2B-206ENST00000456380 COL2A1P02458 1487 aaPredicted RBP15.28■□□□□ 0.04
TRA2B-206ENST00000456380 HMGCS2P54868 508 aa15.28■□□□□ 0.04
TRA2B-206ENST00000456380 TEX11Q8IYF3 940 aa15.28■□□□□ 0.04
TRA2B-206ENST00000456380 SH3RF3Q8TEJ3 882 aaPredicted RBP15.28■□□□□ 0.04
TRA2B-206ENST00000456380 CRISPLD2Q9H0B8 497 aa15.28■□□□□ 0.04
TRA2B-206ENST00000456380 USP17L5A8MUK1 530 aa15.27■□□□□ 0.03
TRA2B-206ENST00000456380 GNAI2P04899 355 aa15.27■□□□□ 0.03
TRA2B-206ENST00000456380 TRIM27P14373 513 aa15.27■□□□□ 0.03
TRA2B-206ENST00000456380 CAPN2P17655 700 aa15.27■□□□□ 0.03
TRA2B-206ENST00000456380 G3BP1Q13283 466 aaKnown RBP eCLIP15.27■□□□□ 0.032e-7■□□□□ 10.7
TRA2B-206ENST00000456380 TBC1D2Q9BYX2 928 aa15.27■□□□□ 0.03
TRA2B-206ENST00000456380 ASCC2Q9H1I8 757 aaPredicted RBP15.27■□□□□ 0.03
TRA2B-206ENST00000456380 LRP2BPQ9P2M1 347 aa15.27■□□□□ 0.03
TRA2B-206ENST00000456380 EVI5O60447 810 aa15.26■□□□□ 0.03
TRA2B-206ENST00000456380 GCLCP48506 637 aaPredicted RBP15.26■□□□□ 0.03
TRA2B-206ENST00000456380 SH3D19Q5HYK7 790 aa15.26■□□□□ 0.03
TRA2B-206ENST00000456380 HERC5Q9UII4 1024 aaKnown RBP15.26■□□□□ 0.03
TRA2B-206ENST00000456380 GJD2Q9UKL4 321 aa15.26■□□□□ 0.03
TRA2B-206ENST00000456380 UQCRFS1P1P0C7P4 283 aa15.25■□□□□ 0.03
TRA2B-206ENST00000456380 PABPC4Q13310 644 aaKnown RBP eCLIP15.25■□□□□ 0.031e-20■□□□□ 8.8
TRA2B-206ENST00000456380 PAWRQ96IZ0 340 aaKnown RBP15.25■□□□□ 0.03
TRA2B-206ENST00000456380 PI4KBQ9UBF8 816 aa15.25■□□□□ 0.03
TRA2B-206ENST00000456380 IPO8O15397 1037 aaKnown RBP15.25■□□□□ 0.03
TRA2B-206ENST00000456380 BCAR3O75815 825 aa15.25■□□□□ 0.03
TRA2B-206ENST00000456380 JAG1P78504 1218 aa15.25■□□□□ 0.03
TRA2B-206ENST00000456380 ATF7IPQ6VMQ6 1270 aa15.25■□□□□ 0.03
TRA2B-206ENST00000456380 DIS3LQ8TF46 1054 aaKnown RBP15.25■□□□□ 0.03
TRA2B-206ENST00000456380 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.25■□□□□ 0.034e-11■□□□□ 8.6
TRA2B-206ENST00000456380 SNRKQ9NRH2 765 aa15.25■□□□□ 0.03
TRA2B-206ENST00000456380 AATFQ9NY61 560 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRA2B-206ENST00000456380 TRIM32Q13049 653 aa15.24■□□□□ 0.03
TRA2B-206ENST00000456380 FRAT1Q92837 279 aaPredicted RBP15.24■□□□□ 0.03
TRA2B-206ENST00000456380 CLUAP1Q96AJ1 413 aa15.24■□□□□ 0.03
TRA2B-206ENST00000456380 WDR18Q9BV38 432 aa15.24■□□□□ 0.03
TRA2B-206ENST00000456380 DHX36Q9H2U1 1008 aaKnown RBP15.24■□□□□ 0.03
TRA2B-206ENST00000456380 HMGCRP04035 888 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 BACE1P56817 501 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 PPP4CP60510 307 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 MTMR2Q13614 643 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 SHROOM1Q2M3G4 852 aaPredicted RBP15.23■□□□□ 0.03
TRA2B-206ENST00000456380 NAA16Q6N069 864 aaPredicted RBP15.23■□□□□ 0.03
TRA2B-206ENST00000456380 NECAB2Q7Z6G3 386 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 ADGRA1Q86SQ6 560 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 MAPKAPK5Q8IW41 473 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 TGFBRAP1Q8WUH2 860 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 NOL10Q9BSC4 688 aaKnown RBP15.23■□□□□ 0.03
TRA2B-206ENST00000456380 DNAJC18Q9H819 358 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 AS3MTQ9HBK9 375 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 MORF4L1Q9UBU8 362 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 STAP2Q9UGK3 403 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 LOC285556D6RIA3 1793 aa15.23■□□□□ 0.03
TRA2B-206ENST00000456380 PEX10O60683 326 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 BAG3O95817 575 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 CYP2E1P05181 493 aaPredicted RBP15.22■□□□□ 0.03
TRA2B-206ENST00000456380 TNNI3KQ59H18 835 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 METTL16Q86W50 562 aaKnown RBP15.22■□□□□ 0.03
TRA2B-206ENST00000456380 P2RX7Q99572 595 aaKnown RBP15.22■□□□□ 0.03
TRA2B-206ENST00000456380 DBNDD2Q9BQY9 259 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 GPR108Q9NPR9 543 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 FPGT-TNNI3KV9GXZ4 949 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 RPTORQ8N122 1335 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 A0A1W2PPC1 479 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 ASNSP08243 561 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 HOXA7P31268 230 aaPredicted RBP15.22■□□□□ 0.03
TRA2B-206ENST00000456380 POLA2Q14181 598 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 TTC39AQ5SRH9 613 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 HMX1Q9NP08 348 aaPredicted RBP15.22■□□□□ 0.03
TRA2B-206ENST00000456380 PALD1Q9ULE6 856 aa15.22■□□□□ 0.03
TRA2B-206ENST00000456380 FLT1P17948 1338 aa15.21■□□□□ 0.03
TRA2B-206ENST00000456380 SOX1O00570 391 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms