RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 DDX54Q8TDD1 881 aaKnown RBP6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 STAG1Q8WVM7 1258 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 SSH1Q8WYL5 1049 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 PMM1Q92871 262 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 COPRSQ9NQ92 184 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 TYW1Q9NV66 732 aaKnown RBP6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 SCHIP1Q9P0W5 487 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 FAM8A1Q9UBU6 413 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 DISP2A7MBM2 1401 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 CACNA1FO60840 1977 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 PCDH11XQ9BZA7 1347 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 PCDH11YQ9BZA8 1340 aa6.47□□□□□ -1.37
HMGB1P4-201ENST00000455362 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 ERVV-2B6SEH9 535 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 KDM6AO15550 1401 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 KCNQ3O43525 872 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 USP17L7P0C7H9 530 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 ETFBP38117 255 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 SMTNP53814 917 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 FOXK2Q01167 660 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 RAB33AQ14088 237 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 FAM26DQ5JW98 314 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 ODR4Q5SWX8 454 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 MEX3CQ5U5Q3 659 aaKnown RBP6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 LRP10Q7Z4F1 713 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 HOMER1Q86YM7 354 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 ETFBKMTQ8IXQ9 262 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 CCDC116Q8IYX3 515 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 ZNF784Q8NCA9 323 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 SH3TC2Q8TF17 1288 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 CPLX3Q8WVH0 158 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 CDK15Q96Q40 435 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 SPOCK3Q9BQ16 436 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 SHANK3Q9BYB0 1731 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 OSBPL7Q9BZF2 842 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 SLC52A2Q9HAB3 445 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 TMPRSS4Q9NRS4 437 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 PGPEP1Q9NXJ5 209 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 USP21Q9UK80 565 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 STRIP2Q9ULQ0 834 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 EFR3BQ9Y2G0 817 aa6.46□□□□□ -1.38
HMGB1P4-201ENST00000455362 KDM3BQ7LBC6 1761 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 HMGB1P1B2RPK0 211 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 PRC1O43663 620 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 TBX4P57082 545 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 EIF4A1P60842 406 aaKnown RBP6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 PDE3AQ14432 1141 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 C11orf91Q3C1V1 193 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 C20orf194Q5TEA3 1177 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 FERMT3Q86UX7 667 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 GPR152Q8TDT2 470 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 HNRNPLLQ8WVV9 542 aaKnown RBP6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 SMC4Q9NTJ3 1288 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 KBTBD4Q9NVX7 518 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 PRR12Q9ULL5 1215 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 WNK3Q9BYP7 1800 aa6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 SOS1Q07889 1333 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P4-201ENST00000455362 HEG1Q9ULI3 1381 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 SERTM1A2A2V5 107 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 FAM221BA6H8Z2 402 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 CDK2AP1O14519 115 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 TCERG1O14776 1098 aaKnown RBP6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 IPO8O15397 1037 aaKnown RBP6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 KLF4O43474 513 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 CD2BP2O95400 341 aaKnown RBP6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 RPLP1P05386 114 aaKnown RBP6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 RPIAP49247 311 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 GYS2P54840 703 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 CABP4P57796 275 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 NR5A1Q13285 461 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 DGKZQ13574 1117 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 RASA3Q14644 834 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 MTFR1Q15390 333 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 TLR1Q15399 786 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 DDB1Q16531 1140 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 ZNF790Q6PG37 636 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 PI16Q6UXB8 463 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 FRAT1Q92837 279 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 IFT43Q96FT9 208 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 GEMIN8Q9NWZ8 242 aaKnown RBP6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 FAM13BQ9NYF5 915 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 TCEAL9Q9UHQ7 104 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 NOB1Q9ULX3 412 aaKnown RBP6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 AFF2P51816 1311 aa6.44□□□□□ -1.38
HMGB1P4-201ENST00000455362 ITGB4P16144 1822 aa6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 MRC1P22897 1456 aa6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 HOXB7P09629 217 aa6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 IFRD2Q12894 506 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 SLC39A6Q13433 755 aa6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 BIRC2Q13490 618 aa6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 PWP1Q13610 501 aa6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 ZKSCAN2Q63HK3 967 aa6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 TRIM67Q6ZTA4 783 aa6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 RELL1Q8IUW5 271 aa6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 MPNDQ8N594 471 aa6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 MARCH10Q8NA82 808 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 EXOC6Q8TAG9 804 aa6.43□□□□□ -1.38
HMGB1P4-201ENST00000455362 TRPM4Q8TD43 1214 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms