RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 MTHFD1LQ6UB35 978 aa10.95□□□□□ -0.66
LINC01940-201ENST00000455228 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
LINC01940-201ENST00000455228 NDUFB9Q9Y6M9 179 aa10.95□□□□□ -0.66
LINC01940-201ENST00000455228 TOPAZ1Q8N9V7 1692 aa10.95□□□□□ -0.66
LINC01940-201ENST00000455228 NPHP4O75161 1426 aaPredicted RBP10.95□□□□□ -0.66
LINC01940-201ENST00000455228 MED23Q9ULK4 1368 aa10.95□□□□□ -0.66
LINC01940-201ENST00000455228 PLEKHG1Q9ULL1 1385 aa10.95□□□□□ -0.66
LINC01940-201ENST00000455228 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
LINC01940-201ENST00000455228 CC2D1AQ6P1N0 951 aaPredicted RBP10.94□□□□□ -0.66
LINC01940-201ENST00000455228 TMCO3Q6UWJ1 677 aa10.94□□□□□ -0.66
LINC01940-201ENST00000455228 CCAR2Q8N163 923 aaKnown RBP10.94□□□□□ -0.66
LINC01940-201ENST00000455228 BICD1Q96G01 975 aa10.94□□□□□ -0.66
LINC01940-201ENST00000455228 THRAP3Q9Y2W1 955 aaKnown RBP10.94□□□□□ -0.66
LINC01940-201ENST00000455228 TSPOAP1O95153 1857 aa10.94□□□□□ -0.66
LINC01940-201ENST00000455228 SPDYE3A6NKU9 549 aa10.94□□□□□ -0.66
LINC01940-201ENST00000455228 NF2P35240 595 aa10.94□□□□□ -0.66
LINC01940-201ENST00000455228 FAM160A1Q05DH4 1040 aa10.94□□□□□ -0.66
LINC01940-201ENST00000455228 CWF19L1Q69YN2 538 aaKnown RBP10.94□□□□□ -0.66
LINC01940-201ENST00000455228 ANKRD13BQ86YJ7 626 aa10.94□□□□□ -0.66
LINC01940-201ENST00000455228 SNRKQ9NRH2 765 aa10.94□□□□□ -0.66
LINC01940-201ENST00000455228 SETD1BQ9UPS6 1966 aaKnown RBP10.94□□□□□ -0.66
LINC01940-201ENST00000455228 SNW1Q13573 536 aaKnown RBP10.94□□□□□ -0.66
LINC01940-201ENST00000455228 HOMER1Q86YM7 354 aa10.94□□□□□ -0.66
LINC01940-201ENST00000455228 IP6K1Q92551 441 aa10.94□□□□□ -0.66
LINC01940-201ENST00000455228 RETREG1Q9H6L5 497 aa10.94□□□□□ -0.66
LINC01940-201ENST00000455228 PTPDC1A2A3K4 754 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 PRAMEF22A3QJZ6 481 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 CLPPQ16740 277 aaPredicted RBP10.93□□□□□ -0.66
LINC01940-201ENST00000455228 STAG2Q8N3U4 1231 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 LRRC59Q96AG4 307 aaKnown RBP10.93□□□□□ -0.66
LINC01940-201ENST00000455228 USP28Q96RU2 1077 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 TMOD4Q9NZQ9 345 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 RCOR1Q9UKL0 485 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 CTDP1Q9Y5B0 961 aaPredicted RBP10.93□□□□□ -0.66
LINC01940-201ENST00000455228 N4BP2Q86UW6 1770 aaPredicted RBP10.93□□□□□ -0.66
LINC01940-201ENST00000455228 CYP21A2P08686 494 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 MYL6BP14649 208 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 IQCA1Q86XH1 822 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 MYOCDQ8IZQ8 938 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 SEC62Q99442 399 aaKnown RBP10.93□□□□□ -0.66
LINC01940-201ENST00000455228 JPH2Q9BR39 696 aaPredicted RBP10.93□□□□□ -0.66
LINC01940-201ENST00000455228 LLPHQ9BRT6 129 aaKnown RBP10.93□□□□□ -0.66
LINC01940-201ENST00000455228 GOLPH3LQ9H4A5 285 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 ODF2LQ9ULJ1 636 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 APOBRQ0VD83 1088 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 MCMDC2Q4G0Z9 681 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 NAA16Q6N069 864 aaPredicted RBP10.93□□□□□ -0.66
LINC01940-201ENST00000455228 YTHDF3Q7Z739 585 aaKnown RBP10.93□□□□□ -0.66
LINC01940-201ENST00000455228 KIAA1328Q86T90 577 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 KAZALD1Q96I82 304 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 KIF9Q9HAQ2 790 aa10.93□□□□□ -0.66
LINC01940-201ENST00000455228 RNMTO43148 476 aaKnown RBP10.92□□□□□ -0.66
LINC01940-201ENST00000455228 TIMM44O43615 452 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 SFPQP23246 707 aaKnown RBP eCLIP10.92□□□□□ -0.66
LINC01940-201ENST00000455228 CCZ1BP86790 482 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 CCZ1P86791 482 aaPredicted RBP10.92□□□□□ -0.66
LINC01940-201ENST00000455228 POSTNQ15063 836 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 DHX40Q8IX18 779 aaKnown RBP10.92□□□□□ -0.66
LINC01940-201ENST00000455228 SAAL1Q96ER3 474 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 PCDHGC5Q9Y5F6 944 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 VCAM1P19320 739 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 TPP2P29144 1249 aaPredicted RBP10.92□□□□□ -0.66
LINC01940-201ENST00000455228 USPL1Q5W0Q7 1092 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 DHX32Q7L7V1 743 aaKnown RBP10.92□□□□□ -0.66
LINC01940-201ENST00000455228 SMYD1Q8NB12 490 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 DIP2BQ9P265 1576 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 TMEM221A6NGB7 291 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 ATP5JP18859 108 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 TMC6Q7Z403 805 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 NSUN7Q8NE18 718 aaKnown RBP10.92□□□□□ -0.66
LINC01940-201ENST00000455228 MRPS27Q92552 414 aaKnown RBP10.92□□□□□ -0.66
LINC01940-201ENST00000455228 NCOA5Q9HCD5 579 aaKnown RBP10.92□□□□□ -0.66
LINC01940-201ENST00000455228 DDX21Q9NR30 783 aaKnown RBP eCLIP10.92□□□□□ -0.66
LINC01940-201ENST00000455228 ZNF510Q9Y2H8 683 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 CRYBG1Q9Y4K1 1723 aa10.92□□□□□ -0.66
LINC01940-201ENST00000455228 H3BQF6 201 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 PFKFB2O60825 505 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 TFCP2Q12800 502 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 STK38Q15208 465 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 GORABQ5T7V8 394 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 APLFQ8IW19 511 aaPredicted RBP10.91□□□□□ -0.66
LINC01940-201ENST00000455228 SYTL4Q96C24 671 aaPredicted RBP10.91□□□□□ -0.66
LINC01940-201ENST00000455228 MYD88Q99836 296 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 DBNLQ9UJU6 430 aaKnown RBP10.91□□□□□ -0.66
LINC01940-201ENST00000455228 A0A1B0GVL5 298 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 RASSF9O75901 435 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 CEBPAP49715 358 aaPredicted RBP10.91□□□□□ -0.66
LINC01940-201ENST00000455228 ROR2Q01974 943 aaKnown RBP10.91□□□□□ -0.66
LINC01940-201ENST00000455228 ATL3Q6DD88 541 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 PHC3Q8NDX5 983 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 SPATA7Q9P0W8 599 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 TBX22Q9Y458 520 aa10.91□□□□□ -0.66
LINC01940-201ENST00000455228 CHD2O14647 1828 aaKnown RBP10.91□□□□□ -0.66
LINC01940-201ENST00000455228 EFCAB8A8MWE9 144 aa10.9□□□□□ -0.66
LINC01940-201ENST00000455228 BIN1O00499 593 aa10.9□□□□□ -0.66
LINC01940-201ENST00000455228 CHGBP05060 677 aa10.9□□□□□ -0.66
LINC01940-201ENST00000455228 USP5P45974 858 aa10.9□□□□□ -0.66
LINC01940-201ENST00000455228 LAMB3Q13751 1172 aa10.9□□□□□ -0.66
LINC01940-201ENST00000455228 TNNI3KQ59H18 835 aa10.9□□□□□ -0.66
LINC01940-201ENST00000455228 LMOD2Q6P5Q4 547 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms