RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 PCP11498 1178 aaKnown RBP19.69■□□□□ 0.74
CCDC90B-202ENST00000455220 YY1P25490 414 aa19.69■□□□□ 0.74
CCDC90B-202ENST00000455220 KRT32Q14532 448 aa19.69■□□□□ 0.74
CCDC90B-202ENST00000455220 SLC4A8Q2Y0W8 1093 aa19.69■□□□□ 0.74
CCDC90B-202ENST00000455220 EAPPQ56P03 285 aaPredicted RBP19.69■□□□□ 0.74
CCDC90B-202ENST00000455220 AKNAD1Q5T1N1 836 aa19.69■□□□□ 0.74
CCDC90B-202ENST00000455220 ZSCAN29Q8IWY8 852 aaPredicted RBP19.69■□□□□ 0.74
CCDC90B-202ENST00000455220 DCPSQ96C86 337 aaKnown RBP19.69■□□□□ 0.74
CCDC90B-202ENST00000455220 SCAF8Q9UPN6 1271 aaKnown RBP19.69■□□□□ 0.74
CCDC90B-202ENST00000455220 SLC3A2P08195 630 aaKnown RBP19.68■□□□□ 0.74
CCDC90B-202ENST00000455220 C16orf86Q6ZW13 317 aa19.68■□□□□ 0.74
CCDC90B-202ENST00000455220 CSRNP1Q96S65 589 aa19.68■□□□□ 0.74
CCDC90B-202ENST00000455220 RNF41Q9H4P4 317 aaPredicted RBP19.68■□□□□ 0.74
CCDC90B-202ENST00000455220 SERPINB13Q9UIV8 391 aa19.68■□□□□ 0.74
CCDC90B-202ENST00000455220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.68■□□□□ 0.74
CCDC90B-202ENST00000455220 ADCK5Q3MIX3 580 aa19.67■□□□□ 0.74
CCDC90B-202ENST00000455220 FOXP4Q8IVH2 680 aaPredicted RBP19.67■□□□□ 0.74
CCDC90B-202ENST00000455220 CDAN1Q8IWY9 1227 aa19.67■□□□□ 0.74
CCDC90B-202ENST00000455220 ZNF526Q8TF50 670 aaPredicted RBP19.67■□□□□ 0.74
CCDC90B-202ENST00000455220 DYNLL2Q96FJ2 89 aa19.67■□□□□ 0.74
CCDC90B-202ENST00000455220 TM6SF1Q9BZW5 370 aa19.67■□□□□ 0.74
CCDC90B-202ENST00000455220 ORC4O43929 436 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 MFSD6Q6ZSS7 791 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 SULF1Q8IWU6 871 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 DNAJC18Q9H819 358 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 NEDD4P46934 1319 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 POTEIP0CG38 1075 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 POTEJP0CG39 1038 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 NT5C2P49902 561 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 MAP3K10Q02779 954 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 PDE4BQ07343 736 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 LDHDQ86WU2 507 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 CNNM2Q9H8M5 875 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 SWAP70Q9UH65 585 aa19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 HERC5Q9UII4 1024 aaKnown RBP19.66■□□□□ 0.74
CCDC90B-202ENST00000455220 TBC1D12O60347 775 aa19.65■□□□□ 0.74
CCDC90B-202ENST00000455220 CDK8P49336 464 aa19.65■□□□□ 0.74
CCDC90B-202ENST00000455220 KRT26Q7Z3Y9 468 aa19.65■□□□□ 0.74
CCDC90B-202ENST00000455220 SLC44A5Q8NCS7 719 aa19.65■□□□□ 0.74
CCDC90B-202ENST00000455220 JAKMIP1Q96N16 626 aaKnown RBP19.65■□□□□ 0.74
CCDC90B-202ENST00000455220 ZNF287Q9HBT7 754 aa19.65■□□□□ 0.74
CCDC90B-202ENST00000455220 INCENPQ9NQS7 918 aa19.65■□□□□ 0.74
CCDC90B-202ENST00000455220 PSMA5P28066 241 aa19.64■□□□□ 0.73
CCDC90B-202ENST00000455220 STK11IPQ8N1F8 1099 aa19.64■□□□□ 0.73
CCDC90B-202ENST00000455220 NCOA7Q8NI08 942 aa19.64■□□□□ 0.73
CCDC90B-202ENST00000455220 NEK1Q96PY6 1258 aa19.64■□□□□ 0.73
CCDC90B-202ENST00000455220 KRT23Q9C075 422 aa19.64■□□□□ 0.73
CCDC90B-202ENST00000455220 MYH8P13535 1937 aa19.63■□□□□ 0.73
CCDC90B-202ENST00000455220 ADM5C9JUS6 153 aa19.63■□□□□ 0.73
CCDC90B-202ENST00000455220 SHMT1P34896 483 aa19.63■□□□□ 0.73
CCDC90B-202ENST00000455220 TRDNQ13061 729 aa19.63■□□□□ 0.73
CCDC90B-202ENST00000455220 COL9A3Q14050 684 aaPredicted RBP19.63■□□□□ 0.73
CCDC90B-202ENST00000455220 NBPF12Q5TAG4 269 aaPredicted RBP19.63■□□□□ 0.73
CCDC90B-202ENST00000455220 CDC37L1Q7L3B6 337 aa19.63■□□□□ 0.73
CCDC90B-202ENST00000455220 MB21D2Q8IYB1 491 aaPredicted RBP19.63■□□□□ 0.73
CCDC90B-202ENST00000455220 ZSWIM6Q9HCJ5 1215 aa19.63■□□□□ 0.73
CCDC90B-202ENST00000455220 SSC5DA1L4H1 1573 aa19.63■□□□□ 0.73
CCDC90B-202ENST00000455220 PRDM1O75626 825 aa19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 HMGB1P09429 215 aaKnown RBP19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 SLURP2P0DP57 97 aa19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 CASTP20810 708 aaKnown RBP19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 TATDN1Q6P1N9 297 aa19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 RALYLQ86SE5 291 aaKnown RBP19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 CRACR2BQ8N4Y2 399 aaPredicted RBP19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 NKX2-3Q8TAU0 364 aa19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 HOOK2Q96ED9 719 aa19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 MKNK2Q9HBH9 465 aa19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 GPBP1L1Q9HC44 474 aaPredicted RBP19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 CLEC11AQ9Y240 323 aa19.62■□□□□ 0.73
CCDC90B-202ENST00000455220 B4E1Z4 1266 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 RASA1P20936 1047 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 RABEP1Q15276 862 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 USP48Q86UV5 1035 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 ESR2Q92731 530 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 TSHZ2Q9NRE2 1034 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 FAM196BA6NMK8 535 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 SUPT20HL1Q3ZLR7 823 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 PRAMEF18Q5VWM3 479 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 BLOC1S2Q6QNY1 142 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 RUFY3Q7L099 469 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 TRIM34Q9BYJ4 488 aa19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 GLIS2Q9BZE0 524 aaPredicted RBP19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.61■□□□□ 0.73
CCDC90B-202ENST00000455220 WDR19Q8NEZ3 1342 aa19.6■□□□□ 0.73
CCDC90B-202ENST00000455220 KDM4AO75164 1064 aa19.6■□□□□ 0.73
CCDC90B-202ENST00000455220 RPS6KB1P23443 525 aa19.6■□□□□ 0.73
CCDC90B-202ENST00000455220 RRP12Q5JTH9 1297 aaKnown RBP19.6■□□□□ 0.73
CCDC90B-202ENST00000455220 MAP1SQ66K74 1059 aaPredicted RBP19.6■□□□□ 0.73
CCDC90B-202ENST00000455220 DHX32Q7L7V1 743 aaKnown RBP19.6■□□□□ 0.73
CCDC90B-202ENST00000455220 IL27Q8NEV9 243 aa19.6■□□□□ 0.73
CCDC90B-202ENST00000455220 UPF3BQ9BZI7 483 aaKnown RBP19.6■□□□□ 0.73
CCDC90B-202ENST00000455220 TOMM22Q9NS69 142 aa19.6■□□□□ 0.73
CCDC90B-202ENST00000455220 CYP46A1Q9Y6A2 500 aa19.6■□□□□ 0.73
CCDC90B-202ENST00000455220 PLIN4Q96Q06 1357 aa19.59■□□□□ 0.73
CCDC90B-202ENST00000455220 CPA1P15085 419 aa19.59■□□□□ 0.73
CCDC90B-202ENST00000455220 MCM5P33992 734 aa19.59■□□□□ 0.73
CCDC90B-202ENST00000455220 ANTXR2P58335 489 aa19.59■□□□□ 0.73
CCDC90B-202ENST00000455220 EXOSC10Q01780 885 aaKnown RBP19.59■□□□□ 0.73
CCDC90B-202ENST00000455220 DCAF15Q66K64 600 aa19.59■□□□□ 0.73
CCDC90B-202ENST00000455220 MIGA2Q7L4E1 593 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms