RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 PIP4K2BP78356 416 aa15.73■□□□□ 0.11
UBE2D3-210ENST00000453744 MAP3K9P80192 1104 aa15.73■□□□□ 0.11
UBE2D3-210ENST00000453744 ZNF174Q15697 407 aa15.73■□□□□ 0.11
UBE2D3-210ENST00000453744 MFSD6Q6ZSS7 791 aa15.73■□□□□ 0.11
UBE2D3-210ENST00000453744 TBX22Q9Y458 520 aa15.73■□□□□ 0.11
UBE2D3-210ENST00000453744 SYNRGQ9UMZ2 1314 aa15.73■□□□□ 0.11
UBE2D3-210ENST00000453744 ZRANB2O95218 330 aaKnown RBP eCLIP15.72■□□□□ 0.111e-7■■□□□ 13.8
UBE2D3-210ENST00000453744 MNAT1P51948 309 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 SETQ01105 290 aaPredicted RBP15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 WTAPQ15007 396 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 MAP9Q49MG5 647 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 FAM107BQ9H098 131 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 CDC27P30260 824 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 APOA5Q6Q788 366 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 FCHSD1Q86WN1 690 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 PLBD2Q8NHP8 589 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 PSMB7Q99436 277 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 PLIN2Q99541 437 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 UBXN1Q04323 297 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 ERBB3P21860 1342 aa15.72■□□□□ 0.11
UBE2D3-210ENST00000453744 CCDC181Q5TID7 509 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 TTC19Q6DKK2 380 aaPredicted RBP15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 KANK3Q6NY19 840 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 NOSTRINQ8IVI9 506 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 TC2NQ8N9U0 490 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 AFAP1L1Q8TED9 768 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 FUT8Q9BYC5 575 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 NACAP1Q9BZK3 213 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 TRIM75PA6NK02 468 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 RANBP6O60518 1105 aaKnown RBP15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 GRIN1Q05586 938 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 CASP8Q14790 479 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 E2F4Q16254 413 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 CNGA4Q8IV77 575 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 MIGA1Q8NAN2 632 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 SENP2Q9HC62 589 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 MRPS25P82663 173 aaKnown RBP15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 SLC4A8Q2Y0W8 1093 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 CCDC122Q5T0U0 273 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 LRP2BPQ9P2M1 347 aa15.71■□□□□ 0.11
UBE2D3-210ENST00000453744 MACROD2A1Z1Q3 448 aa15.7■□□□□ 0.1
UBE2D3-210ENST00000453744 CDC25AP30304 524 aa15.7■□□□□ 0.1
UBE2D3-210ENST00000453744 SCARF1Q14162 830 aa15.7■□□□□ 0.1
UBE2D3-210ENST00000453744 A0A0U1RQJ8 604 aa15.7■□□□□ 0.1
UBE2D3-210ENST00000453744 KRT28Q7Z3Y7 464 aa15.7■□□□□ 0.1
UBE2D3-210ENST00000453744 ATRIPQ8WXE1 791 aa15.7■□□□□ 0.1
UBE2D3-210ENST00000453744 PCDHB6Q9Y5E3 794 aa15.7■□□□□ 0.1
UBE2D3-210ENST00000453744 VSNL1P62760 191 aa15.7■□□□□ 0.1
UBE2D3-210ENST00000453744 KIF6Q6ZMV9 814 aa15.7■□□□□ 0.1
UBE2D3-210ENST00000453744 USP49Q70CQ1 688 aa15.7■□□□□ 0.1
UBE2D3-210ENST00000453744 ADGRL3Q9HAR2 1447 aa15.7■□□□□ 0.1
UBE2D3-210ENST00000453744 ZMYM6O95789 1325 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 PPP6R2O75170 966 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 CTAGE1Q96RT6 745 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 AXIN2Q9Y2T1 843 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 KAT6BQ8WYB5 2073 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 PDIA6Q15084 440 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 FOXP4Q8IVH2 680 aaPredicted RBP15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 CSRNP2Q9H175 543 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 VPS54Q9P1Q0 977 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 CEMIPQ8WUJ3 1361 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 SHTN1A0MZ66 631 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 RFX5P48382 616 aaPredicted RBP15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 LIG3P49916 1009 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 ENOX2Q16206 610 aaKnown RBP15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 CYB5R4Q7L1T6 521 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 SRLQ86TD4 932 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 ARMT1Q9H993 441 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 PREX1Q8TCU6 1659 aa15.69■□□□□ 0.1
UBE2D3-210ENST00000453744 KIAA0754O94854 1291 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 MBD4O95243 580 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 KCNJ6P48051 423 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 RILPL1Q5EBL4 403 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 RESP18Q5W5W9 173 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 RAD9BQ6WBX8 426 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 ZNF532Q9HCE3 1301 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 PRDM1O75626 825 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 TRIM21P19474 475 aaKnown RBP15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 FOXR1Q6PIV2 292 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 TOM1L2Q6ZVM7 507 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 GSPT2Q8IYD1 628 aaKnown RBP15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 MAGEB6Q8N7X4 407 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 EPSTI1Q96J88 318 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 PNKPQ96T60 521 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 MYO6Q9UM54 1294 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 TTF2Q9UNY4 1162 aaKnown RBP15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 HPS5Q9UPZ3 1129 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 ADGRG1Q9Y653 693 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 CCDC196A0A1B0GTZ2 297 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 ZEB2O60315 1214 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 ERCC3P19447 782 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 ANTXR2P58335 489 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 MB21D2Q8IYB1 491 aaPredicted RBP15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 RIN2Q8WYP3 895 aaPredicted RBP15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 STRN4Q9NRL3 753 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 WWC3Q9ULE0 1092 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 RNF40O75150 1001 aa15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 GNL3LQ9NVN8 582 aaKnown RBP15.68■□□□□ 0.1
UBE2D3-210ENST00000453744 TUBE1Q9UJT0 475 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms