RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 STOX1Q6ZVD7 989 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 RNF181Q9P0P0 153 aa18.6■□□□□ 0.57
SNX17-204ENST00000453453 DDX60LQ5H9U9 1706 aaKnown RBP18.59■□□□□ 0.57
SNX17-204ENST00000453453 FLT1P17948 1338 aa18.59■□□□□ 0.57
SNX17-204ENST00000453453 CTDSPL2Q05D32 466 aa18.59■□□□□ 0.57
SNX17-204ENST00000453453 AKNAD1Q5T1N1 836 aa18.59■□□□□ 0.57
SNX17-204ENST00000453453 SASS6Q6UVJ0 657 aa18.59■□□□□ 0.57
SNX17-204ENST00000453453 INTS4Q96HW7 963 aaKnown RBP18.59■□□□□ 0.57
SNX17-204ENST00000453453 KRT23Q9C075 422 aa18.59■□□□□ 0.57
SNX17-204ENST00000453453 TMOD2Q9NZR1 351 aa18.59■□□□□ 0.57
SNX17-204ENST00000453453 POLR3DP05423 398 aaPredicted RBP18.58■□□□□ 0.56
SNX17-204ENST00000453453 PCP11498 1178 aaKnown RBP18.58■□□□□ 0.56
SNX17-204ENST00000453453 ANKRD1Q15327 319 aa18.58■□□□□ 0.56
SNX17-204ENST00000453453 TBC1D10CQ8IV04 446 aa18.58■□□□□ 0.56
SNX17-204ENST00000453453 GPT2Q8TD30 523 aa18.58■□□□□ 0.56
SNX17-204ENST00000453453 STAG1Q8WVM7 1258 aa18.58■□□□□ 0.56
SNX17-204ENST00000453453 DPF2Q92785 391 aa18.58■□□□□ 0.56
SNX17-204ENST00000453453 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.58■□□□□ 0.56
SNX17-204ENST00000453453 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.56
SNX17-204ENST00000453453 ZNF541Q9H0D2 1346 aa18.57■□□□□ 0.56
SNX17-204ENST00000453453 MYO1BO43795 1136 aa18.57■□□□□ 0.56
SNX17-204ENST00000453453 GMPSP49915 693 aaPredicted RBP18.57■□□□□ 0.56
SNX17-204ENST00000453453 FGD1P98174 961 aa18.57■□□□□ 0.56
SNX17-204ENST00000453453 PICALMQ13492 652 aa18.57■□□□□ 0.56
SNX17-204ENST00000453453 CUL4AQ13619 759 aa18.57■□□□□ 0.56
SNX17-204ENST00000453453 DHX32Q7L7V1 743 aaKnown RBP18.57■□□□□ 0.56
SNX17-204ENST00000453453 MTMR14Q8NCE2 650 aa18.57■□□□□ 0.56
SNX17-204ENST00000453453 NBPF3Q9H094 633 aa18.57■□□□□ 0.56
SNX17-204ENST00000453453 TOMM22Q9NS69 142 aa18.57■□□□□ 0.56
SNX17-204ENST00000453453 SPDYE2BA6NHP3 402 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 SPDYE6P0CI01 402 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 CPA1P15085 419 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 NCLP19338 710 aaKnown RBP18.56■□□□□ 0.56
SNX17-204ENST00000453453 UVSSAQ2YD98 709 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 GPC2Q8N158 579 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 TTC14Q96N46 770 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 SAP30BPQ9UHR5 308 aaKnown RBP18.56■□□□□ 0.56
SNX17-204ENST00000453453 PRPF40AO75400 957 aaKnown RBP18.56■□□□□ 0.56
SNX17-204ENST00000453453 WDHD1O75717 1129 aaPredicted RBP18.56■□□□□ 0.56
SNX17-204ENST00000453453 PDE4BQ07343 736 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 C12orf60Q5U649 245 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 C9orf131Q5VYM1 1079 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 FAM184AQ8NB25 1140 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 ALDH8A1Q9H2A2 487 aaPredicted RBP18.56■□□□□ 0.56
SNX17-204ENST00000453453 MYOZ2Q9NPC6 264 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 ZDHHC9Q9Y397 364 aa18.56■□□□□ 0.56
SNX17-204ENST00000453453 WDR19Q8NEZ3 1342 aa18.55■□□□□ 0.56
SNX17-204ENST00000453453 CYP2D7A0A087X1C5 515 aa18.55■□□□□ 0.56
SNX17-204ENST00000453453 NPM3O75607 178 aaKnown RBP18.55■□□□□ 0.56
SNX17-204ENST00000453453 ZNF280AP59817 542 aaPredicted RBP18.55■□□□□ 0.56
SNX17-204ENST00000453453 TTC6Q86TZ1 520 aa18.55■□□□□ 0.56
SNX17-204ENST00000453453 PRMT6Q96LA8 375 aaPredicted RBP18.55■□□□□ 0.56
SNX17-204ENST00000453453 IDI2Q9BXS1 227 aa18.55■□□□□ 0.56
SNX17-204ENST00000453453 TDRD3Q9H7E2 651 aaKnown RBP18.55■□□□□ 0.56
SNX17-204ENST00000453453 ZNF287Q9HBT7 754 aa18.55■□□□□ 0.56
SNX17-204ENST00000453453 PCDHAC2Q9Y5I4 1007 aa18.55■□□□□ 0.56
SNX17-204ENST00000453453 ROBO3Q96MS0 1386 aa18.55■□□□□ 0.56
SNX17-204ENST00000453453 NEDD4P46934 1319 aa18.54■□□□□ 0.56
SNX17-204ENST00000453453 H7C1D1 291 aa18.54■□□□□ 0.56
SNX17-204ENST00000453453 BRD1O95696 1058 aa18.54■□□□□ 0.56
SNX17-204ENST00000453453 CYP2D6P10635 497 aa18.54■□□□□ 0.56
SNX17-204ENST00000453453 NT5C2P49902 561 aa18.54■□□□□ 0.56
SNX17-204ENST00000453453 AK2P54819 239 aa18.54■□□□□ 0.56
SNX17-204ENST00000453453 RRP12Q5JTH9 1297 aaKnown RBP18.54■□□□□ 0.56
SNX17-204ENST00000453453 MICALL2Q8IY33 904 aa18.54■□□□□ 0.56
SNX17-204ENST00000453453 MB21D2Q8IYB1 491 aaPredicted RBP18.54■□□□□ 0.56
SNX17-204ENST00000453453 STK11IPQ8N1F8 1099 aa18.54■□□□□ 0.56
SNX17-204ENST00000453453 ESR2Q92731 530 aa18.54■□□□□ 0.56
SNX17-204ENST00000453453 OSBPL5Q9H0X9 879 aaPredicted RBP18.54■□□□□ 0.56
SNX17-204ENST00000453453 CNOT7Q9UIV1 285 aaKnown RBP18.54■□□□□ 0.56
SNX17-204ENST00000453453 R3HCC1Q9Y3T6 440 aaKnown RBP18.54■□□□□ 0.56
SNX17-204ENST00000453453 B4E1Z4 1266 aa18.53■□□□□ 0.56
SNX17-204ENST00000453453 HLA-DOAP06340 250 aa18.53■□□□□ 0.56
SNX17-204ENST00000453453 NOL8Q76FK4 1167 aaKnown RBP18.53■□□□□ 0.56
SNX17-204ENST00000453453 UQCRHLA0A096LP55 91 aa18.52■□□□□ 0.56
SNX17-204ENST00000453453 PRC1O43663 620 aa18.52■□□□□ 0.56
SNX17-204ENST00000453453 ENTPD3O75355 529 aa18.52■□□□□ 0.56
SNX17-204ENST00000453453 UQCRHP07919 91 aa18.52■□□□□ 0.56
SNX17-204ENST00000453453 SLC4A8Q2Y0W8 1093 aa18.52■□□□□ 0.56
SNX17-204ENST00000453453 Q6ZUG5 572 aa18.52■□□□□ 0.56
SNX17-204ENST00000453453 TSPY26PQ9H489 355 aa18.52■□□□□ 0.56
SNX17-204ENST00000453453 DDX4Q9NQI0 724 aaKnown RBP18.52■□□□□ 0.56
SNX17-204ENST00000453453 TMEM63CQ9P1W3 806 aa18.52■□□□□ 0.56
SNX17-204ENST00000453453 ZNF70Q9UC06 446 aaPredicted RBP18.52■□□□□ 0.56
SNX17-204ENST00000453453 LIMCH1Q9UPQ0 1083 aa18.52■□□□□ 0.56
SNX17-204ENST00000453453 MYH8P13535 1937 aa18.52■□□□□ 0.56
SNX17-204ENST00000453453 ZC3H4Q9UPT8 1303 aaKnown RBP18.52■□□□□ 0.56
SNX17-204ENST00000453453 ORC4O43929 436 aa18.52■□□□□ 0.55
SNX17-204ENST00000453453 KDM4AO75164 1064 aa18.52■□□□□ 0.55
SNX17-204ENST00000453453 EXOSC10Q01780 885 aaKnown RBP18.52■□□□□ 0.55
SNX17-204ENST00000453453 NFIAQ12857 509 aa18.52■□□□□ 0.55
SNX17-204ENST00000453453 SART3Q15020 963 aaKnown RBP18.52■□□□□ 0.55
SNX17-204ENST00000453453 SPDYE2Q495Y8 402 aa18.52■□□□□ 0.55
SNX17-204ENST00000453453 ZSCAN31Q96LW9 406 aaPredicted RBP18.52■□□□□ 0.55
SNX17-204ENST00000453453 TCEANC2Q96MN5 208 aa18.52■□□□□ 0.55
SNX17-204ENST00000453453 DHX36Q9H2U1 1008 aaKnown RBP18.52■□□□□ 0.55
SNX17-204ENST00000453453 GOLGB1Q14789 3259 aaKnown RBP18.51■□□□□ 0.55
SNX17-204ENST00000453453 FGRP09769 529 aa18.51■□□□□ 0.55
SNX17-204ENST00000453453 CACNB3P54284 484 aa18.51■□□□□ 0.55
SNX17-204ENST00000453453 FKBP1CQ5VVH2 108 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms