RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 OSBPL5Q9H0X9 879 aaPredicted RBP14.44□□□□□ -0.1
HERC3-207ENST00000452979 PNMA3Q9UL41 463 aa14.44□□□□□ -0.1
HERC3-207ENST00000452979 LDHCP07864 332 aa14.43□□□□□ -0.1
HERC3-207ENST00000452979 GCLCP48506 637 aaPredicted RBP14.43□□□□□ -0.1
HERC3-207ENST00000452979 TFCP2Q12800 502 aa14.43□□□□□ -0.1
HERC3-207ENST00000452979 FAM110CQ1W6H9 321 aa14.43□□□□□ -0.1
HERC3-207ENST00000452979 ANKRD13CQ8N6S4 541 aa14.43□□□□□ -0.1
HERC3-207ENST00000452979 ZNF280CQ8ND82 737 aa14.43□□□□□ -0.1
HERC3-207ENST00000452979 ARHGAP45Q92619 1136 aa14.43□□□□□ -0.1
HERC3-207ENST00000452979 NSUN4Q96CB9 384 aaKnown RBP14.43□□□□□ -0.1
HERC3-207ENST00000452979 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.43□□□□□ -0.1
HERC3-207ENST00000452979 HMG20BQ9P0W2 317 aa14.43□□□□□ -0.1
HERC3-207ENST00000452979 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.43□□□□□ -0.1
HERC3-207ENST00000452979 ALPK3Q96L96 1907 aa14.43□□□□□ -0.1
HERC3-207ENST00000452979 SRGAP3O43295 1099 aa14.42□□□□□ -0.1
HERC3-207ENST00000452979 EVI5O60447 810 aa14.42□□□□□ -0.1
HERC3-207ENST00000452979 GSTO1P78417 241 aa14.42□□□□□ -0.1
HERC3-207ENST00000452979 SPP2Q13103 211 aa14.42□□□□□ -0.1
HERC3-207ENST00000452979 CCDC84Q86UT8 332 aaPredicted RBP14.42□□□□□ -0.1
HERC3-207ENST00000452979 SPATA5Q8NB90 893 aa14.42□□□□□ -0.1
HERC3-207ENST00000452979 GJD2Q9UKL4 321 aa14.42□□□□□ -0.1
HERC3-207ENST00000452979 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.42□□□□□ -0.1
HERC3-207ENST00000452979 GNAI3P08754 354 aa14.41□□□□□ -0.1
HERC3-207ENST00000452979 CAP2P40123 477 aa14.41□□□□□ -0.1
HERC3-207ENST00000452979 PABPC4Q13310 644 aaKnown RBP eCLIP14.41□□□□□ -0.1
HERC3-207ENST00000452979 SH3D19Q5HYK7 790 aa14.41□□□□□ -0.1
HERC3-207ENST00000452979 ANKLE1Q8NAG6 615 aa14.41□□□□□ -0.1
HERC3-207ENST00000452979 PAWRQ96IZ0 340 aaKnown RBP14.41□□□□□ -0.1
HERC3-207ENST00000452979 PLXNB2O15031 1838 aa14.41□□□□□ -0.1
HERC3-207ENST00000452979 FAM196BA6NMK8 535 aa14.4□□□□□ -0.1
HERC3-207ENST00000452979 ARID4AP29374 1257 aaPredicted RBP14.4□□□□□ -0.1
HERC3-207ENST00000452979 RRP1BQ14684 758 aaKnown RBP14.4□□□□□ -0.1
HERC3-207ENST00000452979 TBC1D9Q6ZT07 1266 aa14.4□□□□□ -0.1
HERC3-207ENST00000452979 NECAB2Q7Z6G3 386 aa14.4□□□□□ -0.1
HERC3-207ENST00000452979 NEUROD6Q96NK8 337 aa14.4□□□□□ -0.1
HERC3-207ENST00000452979 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.4□□□□□ -0.1
HERC3-207ENST00000452979 HERC5Q9UII4 1024 aaKnown RBP14.4□□□□□ -0.1
HERC3-207ENST00000452979 USP17L5A8MUK1 530 aa14.39□□□□□ -0.11
HERC3-207ENST00000452979 RARSP54136 660 aaKnown RBP14.39□□□□□ -0.11
HERC3-207ENST00000452979 WDR18Q9BV38 432 aa14.39□□□□□ -0.11
HERC3-207ENST00000452979 AS3MTQ9HBK9 375 aa14.39□□□□□ -0.11
HERC3-207ENST00000452979 PI4KBQ9UBF8 816 aa14.39□□□□□ -0.11
HERC3-207ENST00000452979 MORF4L1Q9UBU8 362 aa14.39□□□□□ -0.11
HERC3-207ENST00000452979 RPTORQ8N122 1335 aa14.39□□□□□ -0.11
HERC3-207ENST00000452979 SIPA1L1O43166 1804 aa14.38□□□□□ -0.11
HERC3-207ENST00000452979 CDK5RAP2Q96SN8 1893 aa14.38□□□□□ -0.11
HERC3-207ENST00000452979 HMGCRP04035 888 aa14.38□□□□□ -0.11
HERC3-207ENST00000452979 HOXA7P31268 230 aaPredicted RBP14.38□□□□□ -0.11
HERC3-207ENST00000452979 BMP8BP34820 402 aa14.38□□□□□ -0.11
HERC3-207ENST00000452979 HMGCS2P54868 508 aa14.38□□□□□ -0.11
HERC3-207ENST00000452979 PI16Q6UXB8 463 aa14.38□□□□□ -0.11
HERC3-207ENST00000452979 METTL16Q86W50 562 aaKnown RBP14.38□□□□□ -0.11
HERC3-207ENST00000452979 ASCC2Q9H1I8 757 aaPredicted RBP14.38□□□□□ -0.11
HERC3-207ENST00000452979 DHX36Q9H2U1 1008 aaKnown RBP14.38□□□□□ -0.11
HERC3-207ENST00000452979 STAP2Q9UGK3 403 aa14.38□□□□□ -0.11
HERC3-207ENST00000452979 TAOK2Q9UL54 1235 aa14.38□□□□□ -0.11
HERC3-207ENST00000452979 FOCADQ5VW36 1801 aa14.38□□□□□ -0.11
HERC3-207ENST00000452979 UQCRFS1P1P0C7P4 283 aa14.37□□□□□ -0.11
HERC3-207ENST00000452979 MCAMP43121 646 aa14.37□□□□□ -0.11
HERC3-207ENST00000452979 MNX1P50219 401 aaPredicted RBP14.37□□□□□ -0.11
HERC3-207ENST00000452979 PPP4CP60510 307 aa14.37□□□□□ -0.11
HERC3-207ENST00000452979 GORABQ5T7V8 394 aa14.37□□□□□ -0.11
HERC3-207ENST00000452979 TEX11Q8IYF3 940 aa14.37□□□□□ -0.11
HERC3-207ENST00000452979 SH3RF3Q8TEJ3 882 aaPredicted RBP14.37□□□□□ -0.11
HERC3-207ENST00000452979 DIS3LQ8TF46 1054 aaKnown RBP14.37□□□□□ -0.11
HERC3-207ENST00000452979 HMX1Q9NP08 348 aaPredicted RBP14.37□□□□□ -0.11
HERC3-207ENST00000452979 RAI14Q9P0K7 980 aa14.37□□□□□ -0.11
HERC3-207ENST00000452979 SOX1O00570 391 aaPredicted RBP14.36□□□□□ -0.11
HERC3-207ENST00000452979 BACE1P56817 501 aa14.36□□□□□ -0.11
HERC3-207ENST00000452979 MAP3K21Q5TCX8 1036 aa14.36□□□□□ -0.11
HERC3-207ENST00000452979 FOXP4Q8IVH2 680 aaPredicted RBP14.36□□□□□ -0.11
HERC3-207ENST00000452979 GDF15Q99988 308 aa14.36□□□□□ -0.11
HERC3-207ENST00000452979 LRP2BPQ9P2M1 347 aa14.36□□□□□ -0.11
HERC3-207ENST00000452979 DDX60LQ5H9U9 1706 aaKnown RBP14.35□□□□□ -0.11
HERC3-207ENST00000452979 MAST2Q6P0Q8 1798 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 C19orf81C9J6K1 198 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 IGSF3O75054 1194 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 BAG3O95817 575 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 GNAI2P04899 355 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 ASNSP08243 561 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 XRCC5P13010 732 aaKnown RBP14.35□□□□□ -0.11
HERC3-207ENST00000452979 JAG1P78504 1218 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 TRIM32Q13049 653 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 G3BP1Q13283 466 aaKnown RBP eCLIP14.35□□□□□ -0.11
HERC3-207ENST00000452979 GPR153Q6NV75 609 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 P2RX7Q99572 595 aaKnown RBP14.35□□□□□ -0.11
HERC3-207ENST00000452979 NBPF3Q9H094 633 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 GPR108Q9NPR9 543 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 GINM1Q9NU53 330 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 OGDHLQ9ULD0 1010 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 LAMA3Q16787 3333 aa14.35□□□□□ -0.11
HERC3-207ENST00000452979 PNMA6EA0A0J9YXQ4 647 aa14.34□□□□□ -0.11
HERC3-207ENST00000452979 PLCG2P16885 1265 aa14.34□□□□□ -0.11
HERC3-207ENST00000452979 HNRNPUQ00839 825 aaKnown RBP eCLIP14.34□□□□□ -0.11
HERC3-207ENST00000452979 GPRC5AQ8NFJ5 357 aa14.34□□□□□ -0.11
HERC3-207ENST00000452979 TRIB2Q92519 343 aa14.34□□□□□ -0.11
HERC3-207ENST00000452979 NOL10Q9BSC4 688 aaKnown RBP14.34□□□□□ -0.11
HERC3-207ENST00000452979 MYO5AQ9Y4I1 1855 aaKnown RBP14.33□□□□□ -0.11
HERC3-207ENST00000452979 IPO8O15397 1037 aaKnown RBP14.33□□□□□ -0.12
HERC3-207ENST00000452979 HERVK_113P62684 666 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms