RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TTLL4Q14679 1199 aa6.66□□□□□ -1.34
LINC00393-202ENST00000452852 TTBK2Q6IQ55 1244 aa6.66□□□□□ -1.34
LINC00393-202ENST00000452852 PIDD1Q9HB75 910 aa6.66□□□□□ -1.34
LINC00393-202ENST00000452852 PRKAG2Q9UGJ0 569 aa6.66□□□□□ -1.34
LINC00393-202ENST00000452852 EIF4G3O43432 1585 aaKnown RBP6.65□□□□□ -1.34
LINC00393-202ENST00000452852 PRR19A6NJB7 356 aa6.65□□□□□ -1.34
LINC00393-202ENST00000452852 DYNC1LI2O43237 492 aaPredicted RBP6.65□□□□□ -1.34
LINC00393-202ENST00000452852 SORBS3O60504 671 aa6.65□□□□□ -1.34
LINC00393-202ENST00000452852 RNGTTO60942 597 aaKnown RBP6.65□□□□□ -1.34
LINC00393-202ENST00000452852 MAP3K11Q16584 847 aa6.65□□□□□ -1.34
LINC00393-202ENST00000452852 SEZ6L2Q6UXD5 910 aa6.65□□□□□ -1.34
LINC00393-202ENST00000452852 ZAR1Q86SH2 424 aa6.65□□□□□ -1.34
LINC00393-202ENST00000452852 TBC1D32Q96NH3 1257 aa6.65□□□□□ -1.34
LINC00393-202ENST00000452852 MRS2Q9HD23 443 aa6.65□□□□□ -1.34
LINC00393-202ENST00000452852 CSADQ9Y600 493 aa6.65□□□□□ -1.34
LINC00393-202ENST00000452852 HCLS1P14317 486 aaPredicted RBP6.64□□□□□ -1.35
LINC00393-202ENST00000452852 SSTR4P31391 388 aa6.64□□□□□ -1.35
LINC00393-202ENST00000452852 ERVK-24P63145 666 aa6.64□□□□□ -1.35
LINC00393-202ENST00000452852 PTPN11Q06124 597 aaPredicted RBP6.64□□□□□ -1.35
LINC00393-202ENST00000452852 TAF1CQ15572 869 aaPredicted RBP6.64□□□□□ -1.35
LINC00393-202ENST00000452852 SMYD4Q8IYR2 804 aaPredicted RBP6.64□□□□□ -1.35
LINC00393-202ENST00000452852 GATA6Q92908 595 aa6.64□□□□□ -1.35
LINC00393-202ENST00000452852 C1GALT1Q9NS00 363 aa6.64□□□□□ -1.35
LINC00393-202ENST00000452852 ATG3Q9NT62 314 aa6.64□□□□□ -1.35
LINC00393-202ENST00000452852 VTI1BQ9UEU0 232 aa6.64□□□□□ -1.35
LINC00393-202ENST00000452852 PCDHA4Q9UN74 947 aa6.64□□□□□ -1.35
LINC00393-202ENST00000452852 DCDC2CA8MYV0 355 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 CHD1O14646 1710 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 MED26O95402 600 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 NEFMP07197 916 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 TAL1P17542 331 aaPredicted RBP6.63□□□□□ -1.35
LINC00393-202ENST00000452852 PPM1JQ5JR12 505 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 SCARA3Q6AZY7 606 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 USP31Q70CQ4 1352 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 C12orf40Q86WS4 652 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 RNF214Q8ND24 703 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 GIMAP7Q8NHV1 300 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 OSBPL1AQ9BXW6 950 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 BACH2Q9BYV9 841 aa6.63□□□□□ -1.35
LINC00393-202ENST00000452852 ZNF608Q9ULD9 1512 aaPredicted RBP6.63□□□□□ -1.35
LINC00393-202ENST00000452852 RIMBP3CA6NJZ7 1639 aa6.62□□□□□ -1.35
LINC00393-202ENST00000452852 RIMBP3BA6NNM3 1639 aa6.62□□□□□ -1.35
LINC00393-202ENST00000452852 RIMBP3Q9UFD9 1639 aa6.62□□□□□ -1.35
LINC00393-202ENST00000452852 FAM170BA6NMN3 283 aa6.62□□□□□ -1.35
LINC00393-202ENST00000452852 CD97P48960 835 aa6.62□□□□□ -1.35
LINC00393-202ENST00000452852 LIG3P49916 1009 aa6.62□□□□□ -1.35
LINC00393-202ENST00000452852 ST13P50502 369 aaKnown RBP6.62□□□□□ -1.35
LINC00393-202ENST00000452852 RPS26P62854 115 aaKnown RBP6.62□□□□□ -1.35
LINC00393-202ENST00000452852 C9orf131Q5VYM1 1079 aa6.62□□□□□ -1.35
LINC00393-202ENST00000452852 GAL3ST3Q96A11 431 aa6.62□□□□□ -1.35
LINC00393-202ENST00000452852 ISL2Q96A47 359 aa6.62□□□□□ -1.35
LINC00393-202ENST00000452852 CRELD1Q96HD1 420 aa6.62□□□□□ -1.35
LINC00393-202ENST00000452852 SSU72Q9NP77 194 aaKnown RBP6.62□□□□□ -1.35
LINC00393-202ENST00000452852 PCDHB5Q9Y5E4 795 aa6.62□□□□□ -1.35
LINC00393-202ENST00000452852 TARBP1Q13395 1621 aaKnown RBP6.61□□□□□ -1.35
LINC00393-202ENST00000452852 HOXA10P31260 410 aaPredicted RBP6.61□□□□□ -1.35
LINC00393-202ENST00000452852 RING1Q06587 406 aa6.61□□□□□ -1.35
LINC00393-202ENST00000452852 CDK5R2Q13319 367 aa6.61□□□□□ -1.35
LINC00393-202ENST00000452852 INPP5AQ14642 412 aa6.61□□□□□ -1.35
LINC00393-202ENST00000452852 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.61□□□□□ -1.35
LINC00393-202ENST00000452852 AGMOQ6ZNB7 445 aa6.61□□□□□ -1.35
LINC00393-202ENST00000452852 C8orf37Q96NL8 207 aa6.61□□□□□ -1.35
LINC00393-202ENST00000452852 NOC4LQ9BVI4 516 aaKnown RBP6.61□□□□□ -1.35
LINC00393-202ENST00000452852 PIM2Q9P1W9 311 aa6.61□□□□□ -1.35
LINC00393-202ENST00000452852 PCOLCE2Q9UKZ9 415 aa6.61□□□□□ -1.35
LINC00393-202ENST00000452852 LEMD3Q9Y2U8 911 aa6.61□□□□□ -1.35
LINC00393-202ENST00000452852 LMNB1P20700 586 aa6.6□□□□□ -1.35
LINC00393-202ENST00000452852 NTF4P34130 210 aa6.6□□□□□ -1.35
LINC00393-202ENST00000452852 GRIK1P39086 918 aa6.6□□□□□ -1.35
LINC00393-202ENST00000452852 CDK8P49336 464 aa6.6□□□□□ -1.35
LINC00393-202ENST00000452852 SEPT6Q14141 434 aa6.6□□□□□ -1.35
LINC00393-202ENST00000452852 INTS5Q6P9B9 1019 aaKnown RBP6.6□□□□□ -1.35
LINC00393-202ENST00000452852 LRFN4Q6PJG9 635 aa6.6□□□□□ -1.35
LINC00393-202ENST00000452852 ZNF765Q7L2R6 523 aa6.6□□□□□ -1.35
LINC00393-202ENST00000452852 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.6□□□□□ -1.35
LINC00393-202ENST00000452852 ELMO3Q96BJ8 720 aa6.6□□□□□ -1.35
LINC00393-202ENST00000452852 DRC1Q96MC2 740 aa6.6□□□□□ -1.35
LINC00393-202ENST00000452852 METTL22Q9BUU2 404 aaPredicted RBP6.6□□□□□ -1.35
LINC00393-202ENST00000452852 PICK1Q9NRD5 415 aa6.6□□□□□ -1.35
LINC00393-202ENST00000452852 PPP1R1BQ9UD71 204 aaPredicted RBP6.6□□□□□ -1.35
LINC00393-202ENST00000452852 TLR6Q9Y2C9 796 aa6.6□□□□□ -1.35
LINC00393-202ENST00000452852 TFE3P19532 575 aaPredicted RBP6.59□□□□□ -1.35
LINC00393-202ENST00000452852 ERCC5P28715 1186 aaPredicted RBP6.59□□□□□ -1.35
LINC00393-202ENST00000452852 ZC3H6P61129 1189 aaKnown RBP6.59□□□□□ -1.35
LINC00393-202ENST00000452852 HDLBPQ00341 1268 aaKnown RBP6.59□□□□□ -1.35
LINC00393-202ENST00000452852 MRPL58Q14197 206 aaKnown RBP6.59□□□□□ -1.35
LINC00393-202ENST00000452852 CPSF6Q16630 551 aaKnown RBP eCLIP6.59□□□□□ -1.35
LINC00393-202ENST00000452852 NAALADL2Q58DX5 795 aa6.59□□□□□ -1.35
LINC00393-202ENST00000452852 DUSP27Q5VZP5 1158 aa6.59□□□□□ -1.35
LINC00393-202ENST00000452852 OGFOD3Q6PK18 319 aa6.59□□□□□ -1.35
LINC00393-202ENST00000452852 UBE3DQ7Z6J8 389 aa6.59□□□□□ -1.35
LINC00393-202ENST00000452852 SREK1Q8WXA9 508 aaKnown RBP6.59□□□□□ -1.35
LINC00393-202ENST00000452852 PLPPR2Q96GM1 343 aa6.59□□□□□ -1.35
LINC00393-202ENST00000452852 POLA1P09884 1462 aaPredicted RBP6.59□□□□□ -1.36
LINC00393-202ENST00000452852 WDR97A6NE52 1622 aa6.58□□□□□ -1.36
LINC00393-202ENST00000452852 KIAA1324LA8MWY0 1029 aaPredicted RBP6.58□□□□□ -1.36
LINC00393-202ENST00000452852 F6X3S4 739 aa6.58□□□□□ -1.36
LINC00393-202ENST00000452852 FANCGO15287 622 aa6.58□□□□□ -1.36
LINC00393-202ENST00000452852 RLBP1P12271 317 aa6.58□□□□□ -1.36
LINC00393-202ENST00000452852 FOSL1P15407 271 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms