RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PLCG2P16885 1265 aa11.78□□□□□ -0.52
USP54-207ENST00000451492 PTPRAP18433 802 aa11.78□□□□□ -0.52
USP54-207ENST00000451492 USP5P45974 858 aa11.78□□□□□ -0.52
USP54-207ENST00000451492 RRP1P56182 461 aaKnown RBP11.78□□□□□ -0.52
USP54-207ENST00000451492 SP3Q02447 781 aa11.78□□□□□ -0.52
USP54-207ENST00000451492 MAP3K12Q12852 859 aa11.78□□□□□ -0.52
USP54-207ENST00000451492 NOM1Q5C9Z4 860 aaKnown RBP11.78□□□□□ -0.52
USP54-207ENST00000451492 OTOP1Q7RTM1 612 aa11.78□□□□□ -0.52
USP54-207ENST00000451492 CRACR2BQ8N4Y2 399 aaPredicted RBP11.78□□□□□ -0.52
USP54-207ENST00000451492 ERO1AQ96HE7 468 aa11.78□□□□□ -0.52
USP54-207ENST00000451492 TRIM34Q9BYJ4 488 aa11.78□□□□□ -0.52
USP54-207ENST00000451492 BOLA2Q9H3K6 86 aa11.78□□□□□ -0.52
USP54-207ENST00000451492 PDHXO00330 501 aa11.77□□□□□ -0.53
USP54-207ENST00000451492 GDF11O95390 407 aa11.77□□□□□ -0.53
USP54-207ENST00000451492 CAP1Q01518 475 aa11.77□□□□□ -0.53
USP54-207ENST00000451492 FBXO46Q6PJ61 603 aaPredicted RBP11.77□□□□□ -0.53
USP54-207ENST00000451492 LRRCC1Q9C099 1032 aa11.77□□□□□ -0.53
USP54-207ENST00000451492 CPA4Q9UI42 421 aa11.77□□□□□ -0.53
USP54-207ENST00000451492 PALD1Q9ULE6 856 aa11.77□□□□□ -0.53
USP54-207ENST00000451492 KCNH4Q9UQ05 1017 aa11.77□□□□□ -0.53
USP54-207ENST00000451492 CTNND1O60716 968 aaKnown RBP11.76□□□□□ -0.53
USP54-207ENST00000451492 MAP4K4O95819 1239 aaPredicted RBP11.76□□□□□ -0.53
USP54-207ENST00000451492 TTF1Q15361 905 aaPredicted RBP11.76□□□□□ -0.53
USP54-207ENST00000451492 PKN2Q16513 984 aaKnown RBP11.76□□□□□ -0.53
USP54-207ENST00000451492 SHROOM1Q2M3G4 852 aaPredicted RBP11.76□□□□□ -0.53
USP54-207ENST00000451492 SLC9C2Q5TAH2 1124 aa11.76□□□□□ -0.53
USP54-207ENST00000451492 ARHGAP39Q9C0H5 1083 aa11.76□□□□□ -0.53
USP54-207ENST00000451492 EFCC1Q9HA90 598 aa11.76□□□□□ -0.53
USP54-207ENST00000451492 RBBP6Q7Z6E9 1792 aaKnown RBP11.75□□□□□ -0.53
USP54-207ENST00000451492 A0A0G2JLL6 359 aaPredicted RBP11.75□□□□□ -0.53
USP54-207ENST00000451492 MAGEB6P1A0A0J9YX57 407 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 TLR2O60603 784 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
USP54-207ENST00000451492 HLA-DOAP06340 250 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 CYP2C8P10632 490 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 PDE6AP16499 860 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 PPP4CP60510 307 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 MOGSQ13724 837 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 RRP1BQ14684 758 aaKnown RBP11.75□□□□□ -0.53
USP54-207ENST00000451492 SLFNL1Q499Z3 407 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 TSHZ3Q63HK5 1081 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 PRRT2Q7Z6L0 340 aaPredicted RBP11.75□□□□□ -0.53
USP54-207ENST00000451492 ANKRD23Q86SG2 305 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 CRBNQ96SW2 442 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 DNAJC18Q9H819 358 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 PAG1Q9NWQ8 432 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 AFG3L2Q9Y4W6 797 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 ZNF532Q9HCE3 1301 aa11.75□□□□□ -0.53
USP54-207ENST00000451492 TBC1D12O60347 775 aa11.74□□□□□ -0.53
USP54-207ENST00000451492 CHGBP05060 677 aa11.74□□□□□ -0.53
USP54-207ENST00000451492 MAP3K10Q02779 954 aa11.74□□□□□ -0.53
USP54-207ENST00000451492 KIF22Q14807 665 aa11.74□□□□□ -0.53
USP54-207ENST00000451492 PARK7Q99497 189 aaKnown RBP11.74□□□□□ -0.53
USP54-207ENST00000451492 DHX36Q9H2U1 1008 aaKnown RBP11.74□□□□□ -0.53
USP54-207ENST00000451492 PI4KBQ9UBF8 816 aa11.74□□□□□ -0.53
USP54-207ENST00000451492 HERC5Q9UII4 1024 aaKnown RBP11.74□□□□□ -0.53
USP54-207ENST00000451492 CXCL11O14625 94 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 MYCP01106 439 aaPredicted RBP11.73□□□□□ -0.53
USP54-207ENST00000451492 CAP2P40123 477 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 HMGCS2P54868 508 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 MLLT1Q03111 559 aaPredicted RBP11.73□□□□□ -0.53
USP54-207ENST00000451492 SPP2Q13103 211 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 TREML2Q5T2D2 321 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 GPAT2Q6NUI2 795 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 LCORLQ8N3X6 602 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.73□□□□□ -0.53
USP54-207ENST00000451492 SDR42E1Q8WUS8 393 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 ARMT1Q9H993 441 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 ZCCHC17Q9NP64 241 aaKnown RBP11.73□□□□□ -0.53
USP54-207ENST00000451492 PTPN22Q9Y2R2 807 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 PCDHB15Q9Y5E8 787 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 PTCH2Q9Y6C5 1203 aa11.73□□□□□ -0.53
USP54-207ENST00000451492 USP17L5A8MUK1 530 aa11.72□□□□□ -0.53
USP54-207ENST00000451492 POLR3DP05423 398 aaPredicted RBP11.72□□□□□ -0.53
USP54-207ENST00000451492 ATP5JP18859 108 aa11.72□□□□□ -0.53
USP54-207ENST00000451492 JAG1P78504 1218 aa11.72□□□□□ -0.53
USP54-207ENST00000451492 LACTBP83111 547 aaPredicted RBP11.72□□□□□ -0.53
USP54-207ENST00000451492 EVX2Q03828 476 aa11.72□□□□□ -0.53
USP54-207ENST00000451492 MTMR2Q13614 643 aa11.72□□□□□ -0.53
USP54-207ENST00000451492 ZYXQ15942 572 aaKnown RBP11.72□□□□□ -0.53
USP54-207ENST00000451492 FASTKD5Q7L8L6 764 aaKnown RBP11.72□□□□□ -0.53
USP54-207ENST00000451492 SMCR8Q8TEV9 937 aaPredicted RBP11.72□□□□□ -0.53
USP54-207ENST00000451492 HAUS7Q99871 368 aa11.72□□□□□ -0.53
USP54-207ENST00000451492 RIOK1Q9BRS2 568 aaKnown RBP11.72□□□□□ -0.53
USP54-207ENST00000451492 CRNKL1Q9BZJ0 848 aaKnown RBP11.72□□□□□ -0.53
USP54-207ENST00000451492 BRCA2P51587 3418 aa11.72□□□□□ -0.53
USP54-207ENST00000451492 ADGRA2Q96PE1 1338 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 TCRBV5S4A2TA0A5A2 114 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 MBD4O95243 580 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.53
USP54-207ENST00000451492 CTGFP29279 349 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 ADD2P35612 726 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 PSMC4P43686 418 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 C17orf99Q6UX52 265 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 CERS3Q8IU89 383 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 ZNF280CQ8ND82 737 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 GPATCH3Q96I76 525 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.71□□□□□ -0.53
USP54-207ENST00000451492 DCTPP1Q9H773 170 aa11.71□□□□□ -0.53
USP54-207ENST00000451492 AS3MTQ9HBK9 375 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms